Protein–RNA interactions for Protein: A0A0G2JEU8

Trav13n-1, T cell receptor alpha variable 13N-1 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13n-1A0A0G2JEU8 Tmed10-201ENSMUST00000040766 1482 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trav13n-1A0A0G2JEU8 Rnf187-201ENSMUST00000094151 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trav13n-1A0A0G2JEU8 Tmem263-201ENSMUST00000095383 3616 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trav13n-1A0A0G2JEU8 Josd2-211ENSMUST00000134398 563 ntTSL 5 BASIC14.48□□□□□ -0.09
Trav13n-1A0A0G2JEU8 Gm14205-201ENSMUST00000138427 739 ntTSL 3 BASIC14.48□□□□□ -0.09
Trav13n-1A0A0G2JEU8 Gm20522-201ENSMUST00000173576 784 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Trav13n-1A0A0G2JEU8 C1qc-201ENSMUST00000046332 1203 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trav13n-1A0A0G2JEU8 Proca1-201ENSMUST00000060539 960 ntAPPRIS ALT2 TSL 2 BASIC14.48□□□□□ -0.09
Trav13n-1A0A0G2JEU8 2810025M15Rik-201ENSMUST00000061537 1194 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Trav13n-1A0A0G2JEU8 Pdcd7-201ENSMUST00000048184 2419 ntAPPRIS P2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trav13n-1A0A0G2JEU8 Dus1l-209ENSMUST00000167023 1909 ntAPPRIS P2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trav13n-1A0A0G2JEU8 Dus1l-201ENSMUST00000026151 1930 ntAPPRIS ALT2 TSL 5 BASIC14.48□□□□□ -0.09
Trav13n-1A0A0G2JEU8 Man1a-203ENSMUST00000105470 2847 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
Trav13n-1A0A0G2JEU8 Acsl6-209ENSMUST00000108904 2594 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Trav13n-1A0A0G2JEU8 Sc5d-202ENSMUST00000169609 1677 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trav13n-1A0A0G2JEU8 Oxsr1-201ENSMUST00000040853 4647 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trav13n-1A0A0G2JEU8 Eif5a-202ENSMUST00000070996 1373 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trav13n-1A0A0G2JEU8 Inpp5a-203ENSMUST00000106098 2826 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trav13n-1A0A0G2JEU8 Chkb-201ENSMUST00000023289 1707 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trav13n-1A0A0G2JEU8 E130208F15Rik-201ENSMUST00000098585 1733 ntAPPRIS P1 BASIC14.47□□□□□ -0.09
Trav13n-1A0A0G2JEU8 Tfg-201ENSMUST00000065515 1945 ntAPPRIS P2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trav13n-1A0A0G2JEU8 Traf3-203ENSMUST00000117269 6972 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Trav13n-1A0A0G2JEU8 Doc2a-201ENSMUST00000064110 2538 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trav13n-1A0A0G2JEU8 Dynll2-201ENSMUST00000020775 2476 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trav13n-1A0A0G2JEU8 Morf4l1-201ENSMUST00000085248 1882 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Trav13n-1A0A0G2JEU8 Kctd8-202ENSMUST00000087231 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trav13n-1A0A0G2JEU8 Ppp1r18os-201ENSMUST00000145804 784 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Trav13n-1A0A0G2JEU8 Hsd17b3-202ENSMUST00000166224 1286 ntAPPRIS P1 TSL 2 BASIC14.47□□□□□ -0.09
Trav13n-1A0A0G2JEU8 Siglec15-201ENSMUST00000170760 1156 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trav13n-1A0A0G2JEU8 Sox8-202ENSMUST00000173447 928 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trav13n-1A0A0G2JEU8 1700056E22Rik-201ENSMUST00000050306 967 ntAPPRIS P1 BASIC14.47□□□□□ -0.09
Trav13n-1A0A0G2JEU8 Ezh2-201ENSMUST00000081721 2787 ntAPPRIS P2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trav13n-1A0A0G2JEU8 Fam19a5-201ENSMUST00000068088 2575 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trav13n-1A0A0G2JEU8 Gpr160-204ENSMUST00000108261 2213 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Trav13n-1A0A0G2JEU8 Cep170b-202ENSMUST00000101018 6641 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Trav13n-1A0A0G2JEU8 Nexmif-201ENSMUST00000056502 5211 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Trav13n-1A0A0G2JEU8 Naa20-202ENSMUST00000110000 1142 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Trav13n-1A0A0G2JEU8 Mrpl16-201ENSMUST00000167199 1122 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Trav13n-1A0A0G2JEU8 Gm27454-201ENSMUST00000185090 204 ntBASIC14.46□□□□□ -0.09
Trav13n-1A0A0G2JEU8 1700064M15Rik-201ENSMUST00000185726 645 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Trav13n-1A0A0G2JEU8 C1ql4-201ENSMUST00000064462 874 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Trav13n-1A0A0G2JEU8 6330562C20Rik-201ENSMUST00000098867 784 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Trav13n-1A0A0G2JEU8 Sirt1-201ENSMUST00000020257 3905 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
Trav13n-1A0A0G2JEU8 Chd5-205ENSMUST00000164662 9375 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Trav13n-1A0A0G2JEU8 Tuba1b-201ENSMUST00000077577 1743 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Trav13n-1A0A0G2JEU8 Slc12a8-204ENSMUST00000121925 2656 ntAPPRIS P2 TSL 5 BASIC14.46□□□□□ -0.1
Trav13n-1A0A0G2JEU8 Gm42418-201ENSMUST00000182010 1831 ntBASIC14.45□□□□□ -0.1
Trav13n-1A0A0G2JEU8 Lmtk3-204ENSMUST00000209617 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trav13n-1A0A0G2JEU8 Mrpl38-201ENSMUST00000106439 1411 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trav13n-1A0A0G2JEU8 Igfbp7-202ENSMUST00000163898 1200 ntAPPRIS P4 TSL 5 BASIC14.45□□□□□ -0.1
Trav13n-1A0A0G2JEU8 Rps2-ps10-202ENSMUST00000170335 965 ntBASIC14.45□□□□□ -0.1
Trav13n-1A0A0G2JEU8 9530036O11Rik-201ENSMUST00000180878 876 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Trav13n-1A0A0G2JEU8 Gm4553-202ENSMUST00000210925 1044 ntAPPRIS P5 BASIC14.45□□□□□ -0.1
Trav13n-1A0A0G2JEU8 Gm7143-201ENSMUST00000222811 859 ntBASIC14.45□□□□□ -0.1
Trav13n-1A0A0G2JEU8 Rgs6-202ENSMUST00000161801 2141 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Trav13n-1A0A0G2JEU8 Ier3ip1-201ENSMUST00000026487 1395 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trav13n-1A0A0G2JEU8 Mcoln1-201ENSMUST00000004683 2065 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trav13n-1A0A0G2JEU8 Lsm14a-201ENSMUST00000085585 2944 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trav13n-1A0A0G2JEU8 Tmem45b-201ENSMUST00000048050 1799 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trav13n-1A0A0G2JEU8 Nab2-202ENSMUST00000099157 2311 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Trav13n-1A0A0G2JEU8 Slc25a3-203ENSMUST00000164505 1483 ntAPPRIS P2 TSL 5 BASIC14.44□□□□□ -0.1
Trav13n-1A0A0G2JEU8 Retreg2-201ENSMUST00000097694 2561 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trav13n-1A0A0G2JEU8 Best2-201ENSMUST00000059072 1971 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trav13n-1A0A0G2JEU8 Ppp1r12b-203ENSMUST00000112163 828 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Trav13n-1A0A0G2JEU8 Gm3448-203ENSMUST00000179539 787 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trav13n-1A0A0G2JEU8 Gm45417-201ENSMUST00000209533 758 ntBASIC14.44□□□□□ -0.1
Trav13n-1A0A0G2JEU8 Rfxap-204ENSMUST00000217267 696 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trav13n-1A0A0G2JEU8 Ttc39b-201ENSMUST00000030205 842 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Trav13n-1A0A0G2JEU8 Gm3448-201ENSMUST00000097399 787 ntAPPRIS P5 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trav13n-1A0A0G2JEU8 Wipi1-202ENSMUST00000103060 2050 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trav13n-1A0A0G2JEU8 Msto1-201ENSMUST00000107494 2093 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Trav13n-1A0A0G2JEU8 9230116N13Rik-201ENSMUST00000181746 2097 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Trav13n-1A0A0G2JEU8 Prdm13-202ENSMUST00000095141 3173 ntAPPRIS P2 TSL 2 BASIC14.44□□□□□ -0.1
Trav13n-1A0A0G2JEU8 Gbx2-201ENSMUST00000036954 2135 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trav13n-1A0A0G2JEU8 Bdh1-201ENSMUST00000089759 1711 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trav13n-1A0A0G2JEU8 Hr-203ENSMUST00000161069 5607 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trav13n-1A0A0G2JEU8 Dusp28-201ENSMUST00000060913 1314 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trav13n-1A0A0G2JEU8 Ghitm-201ENSMUST00000042564 2573 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trav13n-1A0A0G2JEU8 Maf1-201ENSMUST00000023212 1686 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trav13n-1A0A0G2JEU8 Fkbp8-201ENSMUST00000075491 1698 ntAPPRIS P4 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trav13n-1A0A0G2JEU8 Rims1-209ENSMUST00000218140 1434 ntTSL 5 BASIC14.43□□□□□ -0.1
Trav13n-1A0A0G2JEU8 AC164883.3-201ENSMUST00000227396 1774 ntBASIC14.43□□□□□ -0.1
Trav13n-1A0A0G2JEU8 Tcte2-209ENSMUST00000143162 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trav13n-1A0A0G2JEU8 Gm2464-202ENSMUST00000194841 877 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Trav13n-1A0A0G2JEU8 Zfp287-205ENSMUST00000150336 1605 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Trav13n-1A0A0G2JEU8 Hras-201ENSMUST00000026572 2828 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trav13n-1A0A0G2JEU8 Slc35a2-209ENSMUST00000208397 1374 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
Trav13n-1A0A0G2JEU8 Ubald2-201ENSMUST00000057676 1482 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trav13n-1A0A0G2JEU8 Fam117b-201ENSMUST00000036540 5532 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trav13n-1A0A0G2JEU8 Rasgrf2-206ENSMUST00000216219 2115 ntTSL 5 BASIC14.42□□□□□ -0.1
Trav13n-1A0A0G2JEU8 Lmtk3-201ENSMUST00000072580 4807 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trav13n-1A0A0G2JEU8 2310022A10Rik-205ENSMUST00000187960 1989 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
Trav13n-1A0A0G2JEU8 Actr3b-201ENSMUST00000088244 1712 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trav13n-1A0A0G2JEU8 Rnf187-202ENSMUST00000217262 711 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trav13n-1A0A0G2JEU8 Baiap2-203ENSMUST00000103021 3398 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trav13n-1A0A0G2JEU8 Ezh2-203ENSMUST00000114616 2670 ntAPPRIS ALT1 TSL 5 BASIC14.42□□□□□ -0.1
Trav13n-1A0A0G2JEU8 Plk5-201ENSMUST00000039836 2112 ntAPPRIS P3 TSL 2 BASIC14.42□□□□□ -0.1
Trav13n-1A0A0G2JEU8 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
Trav13n-1A0A0G2JEU8 Mmadhc-201ENSMUST00000102769 1342 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trav13n-1A0A0G2JEU8 Twist2-201ENSMUST00000007949 1329 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 29.6 ms