Protein–RNA interactions for Protein: A0A0B4J1P5

Trbv26, T cell receptor beta, variable 26 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv26A0A0B4J1P5 Stx18-202ENSMUST00000042146 1473 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Trbv26A0A0B4J1P5 Hira-201ENSMUST00000004222 4218 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Trbv26A0A0B4J1P5 Spr-203ENSMUST00000174769 1029 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Trbv26A0A0B4J1P5 Klc3-201ENSMUST00000047170 1901 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Trbv26A0A0B4J1P5 1700030C10Rik-203ENSMUST00000189625 1735 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Trbv26A0A0B4J1P5 Pias2-202ENSMUST00000114777 4968 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Trbv26A0A0B4J1P5 Dvl3-201ENSMUST00000003318 2498 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Trbv26A0A0B4J1P5 Srsf12-201ENSMUST00000067864 2939 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Trbv26A0A0B4J1P5 Rexo5-201ENSMUST00000033218 1966 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Trbv26A0A0B4J1P5 March2-206ENSMUST00000173329 2566 ntTSL 2 BASIC16.69■□□□□ 0.26
Trbv26A0A0B4J1P5 Hsd17b3-202ENSMUST00000166224 1286 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
Trbv26A0A0B4J1P5 Dynlt1f-201ENSMUST00000179554 807 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Trbv26A0A0B4J1P5 D630002J18Rik-201ENSMUST00000181854 1115 ntBASIC16.69■□□□□ 0.26
Trbv26A0A0B4J1P5 Pi4kb-207ENSMUST00000167008 1962 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Trbv26A0A0B4J1P5 5730488B01Rik-201ENSMUST00000192889 2311 ntBASIC16.69■□□□□ 0.26
Trbv26A0A0B4J1P5 Alx3-201ENSMUST00000014747 1874 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Trbv26A0A0B4J1P5 Art1-201ENSMUST00000033300 1425 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Trbv26A0A0B4J1P5 Htra2-202ENSMUST00000113962 1305 ntTSL 5 BASIC16.69■□□□□ 0.26
Trbv26A0A0B4J1P5 Slbp-201ENSMUST00000057551 1906 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
Trbv26A0A0B4J1P5 Slc35a2-209ENSMUST00000208397 1374 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
Trbv26A0A0B4J1P5 Hr-203ENSMUST00000161069 5607 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Trbv26A0A0B4J1P5 Gm43530-201ENSMUST00000195920 274 ntBASIC16.68■□□□□ 0.26
Trbv26A0A0B4J1P5 Ppp1cb-206ENSMUST00000202078 383 ntTSL 5 BASIC16.68■□□□□ 0.26
Trbv26A0A0B4J1P5 Bag1-201ENSMUST00000030125 1295 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Trbv26A0A0B4J1P5 Mast4-205ENSMUST00000166726 5968 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
Trbv26A0A0B4J1P5 Tcerg1l-201ENSMUST00000160436 2565 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
Trbv26A0A0B4J1P5 Snap91-203ENSMUST00000074501 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Trbv26A0A0B4J1P5 Fah-201ENSMUST00000032865 1585 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Trbv26A0A0B4J1P5 Baz1a-201ENSMUST00000038926 6188 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
Trbv26A0A0B4J1P5 Utp11-201ENSMUST00000030738 1603 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Trbv26A0A0B4J1P5 Ccne1-201ENSMUST00000108023 2000 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Trbv26A0A0B4J1P5 Tmem191c-213ENSMUST00000164950 1394 ntAPPRIS P1 TSL 3 BASIC16.67■□□□□ 0.26
Trbv26A0A0B4J1P5 Nars2-202ENSMUST00000107159 1777 ntTSL 5 BASIC16.67■□□□□ 0.26
Trbv26A0A0B4J1P5 Kcnip2-202ENSMUST00000079431 2302 ntAPPRIS ALT1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Trbv26A0A0B4J1P5 1110065P20Rik-206ENSMUST00000185036 1223 ntTSL 2 BASIC16.67■□□□□ 0.26
Trbv26A0A0B4J1P5 AC140930.3-201ENSMUST00000222935 274 ntBASIC16.67■□□□□ 0.26
Trbv26A0A0B4J1P5 Stn1-201ENSMUST00000049369 1992 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Trbv26A0A0B4J1P5 Map2k2-202ENSMUST00000105331 1556 ntAPPRIS ALT1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Trbv26A0A0B4J1P5 Spint1-201ENSMUST00000028783 2273 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Trbv26A0A0B4J1P5 Rxrb-203ENSMUST00000173354 1743 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Trbv26A0A0B4J1P5 Mapk11-201ENSMUST00000088823 2440 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Trbv26A0A0B4J1P5 Strn3-201ENSMUST00000013130 3046 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Trbv26A0A0B4J1P5 Nipa1-201ENSMUST00000052204 3183 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Trbv26A0A0B4J1P5 Atrn-201ENSMUST00000028781 8745 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Trbv26A0A0B4J1P5 Fance-202ENSMUST00000114801 1751 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Trbv26A0A0B4J1P5 Ier3ip1-201ENSMUST00000026487 1395 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Trbv26A0A0B4J1P5 Aatf-201ENSMUST00000018841 1822 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Trbv26A0A0B4J1P5 Msantd3-203ENSMUST00000107704 1597 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Trbv26A0A0B4J1P5 Naa20-202ENSMUST00000110000 1142 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Trbv26A0A0B4J1P5 Tcte2-209ENSMUST00000143162 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Trbv26A0A0B4J1P5 Gm9207-201ENSMUST00000198773 1115 ntBASIC16.66■□□□□ 0.26
Trbv26A0A0B4J1P5 3110082J24Rik-202ENSMUST00000199573 767 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Trbv26A0A0B4J1P5 Pth2-202ENSMUST00000210086 481 ntTSL 2 BASIC16.66■□□□□ 0.26
Trbv26A0A0B4J1P5 Nkpd1-203ENSMUST00000214205 2309 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
Trbv26A0A0B4J1P5 C1ql4-201ENSMUST00000064462 874 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Trbv26A0A0B4J1P5 Bfsp1-202ENSMUST00000099296 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Trbv26A0A0B4J1P5 Hhex-201ENSMUST00000025944 1802 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Trbv26A0A0B4J1P5 Kcnt1-203ENSMUST00000114172 5219 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Trbv26A0A0B4J1P5 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Trbv26A0A0B4J1P5 Arhgap27os2-201ENSMUST00000123812 1390 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Trbv26A0A0B4J1P5 Atg3-201ENSMUST00000023343 2057 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Trbv26A0A0B4J1P5 Sema6d-203ENSMUST00000077847 6444 ntTSL 5 BASIC16.65■□□□□ 0.26
Trbv26A0A0B4J1P5 Nkain1-201ENSMUST00000105993 1202 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Trbv26A0A0B4J1P5 Gm43759-201ENSMUST00000196925 1261 ntBASIC16.65■□□□□ 0.26
Trbv26A0A0B4J1P5 Krt8-ps-201ENSMUST00000208495 945 ntBASIC16.65■□□□□ 0.26
Trbv26A0A0B4J1P5 AC122379.1-201ENSMUST00000220658 355 ntTSL 3 BASIC16.65■□□□□ 0.26
Trbv26A0A0B4J1P5 Sorcs2-201ENSMUST00000037370 5707 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Trbv26A0A0B4J1P5 Dedd-203ENSMUST00000111299 2322 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Trbv26A0A0B4J1P5 Has1-201ENSMUST00000003762 2090 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Trbv26A0A0B4J1P5 Pank2-204ENSMUST00000150843 4266 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Trbv26A0A0B4J1P5 Stac3-202ENSMUST00000160019 1581 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Trbv26A0A0B4J1P5 Rxra-201ENSMUST00000077257 4905 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Trbv26A0A0B4J1P5 Bspry-201ENSMUST00000030088 1757 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Trbv26A0A0B4J1P5 Dleu2-203ENSMUST00000182259 1437 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Trbv26A0A0B4J1P5 Ptpre-202ENSMUST00000209256 2593 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Trbv26A0A0B4J1P5 Gpr160-204ENSMUST00000108261 2213 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Trbv26A0A0B4J1P5 1700016H13Rik-205ENSMUST00000134926 1104 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Trbv26A0A0B4J1P5 Siglec15-201ENSMUST00000170760 1156 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Trbv26A0A0B4J1P5 N4bp2os-203ENSMUST00000202673 699 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Trbv26A0A0B4J1P5 Fuz-214ENSMUST00000209132 853 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Trbv26A0A0B4J1P5 6330562C20Rik-201ENSMUST00000098867 784 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Trbv26A0A0B4J1P5 Chd5-205ENSMUST00000164662 9375 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Trbv26A0A0B4J1P5 Fmnl2-201ENSMUST00000049483 5461 ntTSL 5 BASIC16.64■□□□□ 0.25
Trbv26A0A0B4J1P5 Atpaf1-203ENSMUST00000176047 2330 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Trbv26A0A0B4J1P5 Eif2ak4-207ENSMUST00000110877 2134 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Trbv26A0A0B4J1P5 Slc16a11-205ENSMUST00000126388 1938 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
Trbv26A0A0B4J1P5 Tril-201ENSMUST00000127748 5363 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
Trbv26A0A0B4J1P5 Akt1-201ENSMUST00000001780 2690 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Trbv26A0A0B4J1P5 Xylt1-201ENSMUST00000032892 9020 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Trbv26A0A0B4J1P5 Irf2bp1-201ENSMUST00000053713 2734 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
Trbv26A0A0B4J1P5 Ints11-201ENSMUST00000030901 2368 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Trbv26A0A0B4J1P5 Mark2-202ENSMUST00000032557 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Trbv26A0A0B4J1P5 Gm27151-202ENSMUST00000185015 1145 ntTSL 5 BASIC16.63■□□□□ 0.25
Trbv26A0A0B4J1P5 Mapkapk3-208ENSMUST00000192054 944 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Trbv26A0A0B4J1P5 Rnf187-202ENSMUST00000217262 711 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Trbv26A0A0B4J1P5 Fgfr1-215ENSMUST00000179592 5041 ntTSL 5 BASIC16.63■□□□□ 0.25
Trbv26A0A0B4J1P5 Thoc6-201ENSMUST00000047436 1504 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Trbv26A0A0B4J1P5 Stk3-202ENSMUST00000067033 2471 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Trbv26A0A0B4J1P5 Lsm12-201ENSMUST00000021297 2256 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Trbv26A0A0B4J1P5 Lzts2-202ENSMUST00000178087 2773 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 19.5 ms