Protein–RNA interactions for Protein: A0A0B4J1H3

Trbv16, T cell receptor beta, variable 16 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv16A0A0B4J1H3 Prkar2b-201ENSMUST00000003079 1657 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trbv16A0A0B4J1H3 Rfk-201ENSMUST00000025617 2482 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trbv16A0A0B4J1H3 Sptbn4-207ENSMUST00000172269 8737 ntAPPRIS ALT2 TSL 2 BASIC14.57□□□□□ -0.08
Trbv16A0A0B4J1H3 Vwc2-201ENSMUST00000056344 1350 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trbv16A0A0B4J1H3 Iglon5-201ENSMUST00000107974 2622 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trbv16A0A0B4J1H3 Akt1s1-204ENSMUST00000107885 1812 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trbv16A0A0B4J1H3 Pbx1-206ENSMUST00000176790 1828 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Trbv16A0A0B4J1H3 Dgcr6-209ENSMUST00000155387 1415 ntTSL 3 BASIC14.57□□□□□ -0.08
Trbv16A0A0B4J1H3 6330403K07Rik-201ENSMUST00000156068 1494 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Trbv16A0A0B4J1H3 Ccng2-201ENSMUST00000031331 2810 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trbv16A0A0B4J1H3 Cnr1-201ENSMUST00000057188 5807 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trbv16A0A0B4J1H3 AA543186-201ENSMUST00000180841 1696 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Trbv16A0A0B4J1H3 Art5-204ENSMUST00000106937 1713 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trbv16A0A0B4J1H3 Chkb-201ENSMUST00000023289 1707 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trbv16A0A0B4J1H3 Rbm7-201ENSMUST00000170000 1773 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trbv16A0A0B4J1H3 Krtap28-10-201ENSMUST00000188323 957 ntAPPRIS P1 BASIC14.56□□□□□ -0.08
Trbv16A0A0B4J1H3 Gm10399-202ENSMUST00000202768 748 ntBASIC14.56□□□□□ -0.08
Trbv16A0A0B4J1H3 Bloc1s5-202ENSMUST00000224115 1020 ntBASIC14.56□□□□□ -0.08
Trbv16A0A0B4J1H3 Klhl15-205ENSMUST00000113916 2363 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trbv16A0A0B4J1H3 Gab2-201ENSMUST00000004622 6168 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trbv16A0A0B4J1H3 Oxsr1-201ENSMUST00000040853 4647 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trbv16A0A0B4J1H3 E4f1-201ENSMUST00000056032 2574 ntAPPRIS P2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trbv16A0A0B4J1H3 Ttc9b-201ENSMUST00000008088 2052 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trbv16A0A0B4J1H3 Pou2f2-210ENSMUST00000176408 1697 ntTSL 5 BASIC14.55□□□□□ -0.08
Trbv16A0A0B4J1H3 Cerk-201ENSMUST00000044332 4518 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trbv16A0A0B4J1H3 Xylt1-201ENSMUST00000032892 9020 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trbv16A0A0B4J1H3 Kcnmb4os2-203ENSMUST00000127070 1048 ntTSL 2 BASIC14.55□□□□□ -0.08
Trbv16A0A0B4J1H3 Gm27040-201ENSMUST00000181984 504 ntTSL 2 BASIC14.55□□□□□ -0.08
Trbv16A0A0B4J1H3 Dleu2-209ENSMUST00000182957 352 ntTSL 2 BASIC14.55□□□□□ -0.08
Trbv16A0A0B4J1H3 Prrt2-206ENSMUST00000202045 429 ntTSL 5 BASIC14.55□□□□□ -0.08
Trbv16A0A0B4J1H3 Ccdc84-212ENSMUST00000217351 888 ntTSL 3 BASIC14.55□□□□□ -0.08
Trbv16A0A0B4J1H3 Mal2-201ENSMUST00000025356 2950 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trbv16A0A0B4J1H3 Pth2-201ENSMUST00000042754 503 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trbv16A0A0B4J1H3 Tead1-204ENSMUST00000106638 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trbv16A0A0B4J1H3 Stau2-217ENSMUST00000162751 3030 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trbv16A0A0B4J1H3 Gm572-201ENSMUST00000105698 1385 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
Trbv16A0A0B4J1H3 Smim19-202ENSMUST00000163774 1435 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Trbv16A0A0B4J1H3 1700030C10Rik-203ENSMUST00000189625 1735 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Trbv16A0A0B4J1H3 Hpdl-201ENSMUST00000055436 1804 ntAPPRIS P1 BASIC14.55□□□□□ -0.08
Trbv16A0A0B4J1H3 Schip1-205ENSMUST00000182532 2059 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Trbv16A0A0B4J1H3 Trmt61a-202ENSMUST00000168338 2131 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
Trbv16A0A0B4J1H3 Gm16933-201ENSMUST00000141741 2169 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Trbv16A0A0B4J1H3 Krt76-201ENSMUST00000100179 2312 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trbv16A0A0B4J1H3 Sft2d3-201ENSMUST00000054984 2810 ntAPPRIS P1 BASIC14.54□□□□□ -0.08
Trbv16A0A0B4J1H3 Tmem240-202ENSMUST00000147721 817 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trbv16A0A0B4J1H3 Fam89b-203ENSMUST00000161368 1160 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Trbv16A0A0B4J1H3 Tmem41a-201ENSMUST00000023562 1359 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trbv16A0A0B4J1H3 Dexi-201ENSMUST00000038281 1389 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trbv16A0A0B4J1H3 Tmem230-206ENSMUST00000180286 1531 ntAPPRIS P1 TSL 2 BASIC14.54□□□□□ -0.08
Trbv16A0A0B4J1H3 Cobll1-202ENSMUST00000102726 5031 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trbv16A0A0B4J1H3 Cobll1-203ENSMUST00000112429 5045 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
Trbv16A0A0B4J1H3 Slc25a38-201ENSMUST00000035106 1791 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trbv16A0A0B4J1H3 Man2c1os-201ENSMUST00000125333 1910 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Trbv16A0A0B4J1H3 Aadat-201ENSMUST00000079472 1972 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trbv16A0A0B4J1H3 Ung-202ENSMUST00000102584 2136 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trbv16A0A0B4J1H3 Ddost-201ENSMUST00000030538 2120 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trbv16A0A0B4J1H3 Gabra5-201ENSMUST00000068456 2671 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trbv16A0A0B4J1H3 Foxj2-201ENSMUST00000003238 5283 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trbv16A0A0B4J1H3 Hnrnpd-211ENSMUST00000172361 6811 ntAPPRIS P4 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trbv16A0A0B4J1H3 Man1a-203ENSMUST00000105470 2847 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
Trbv16A0A0B4J1H3 Sp5-201ENSMUST00000100043 2100 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trbv16A0A0B4J1H3 Gdf7-202ENSMUST00000220073 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trbv16A0A0B4J1H3 Rtl10-201ENSMUST00000146673 865 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trbv16A0A0B4J1H3 Gm20684-201ENSMUST00000176744 380 ntTSL 3 BASIC14.53□□□□□ -0.08
Trbv16A0A0B4J1H3 Pgls-201ENSMUST00000034264 893 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trbv16A0A0B4J1H3 Cbr3-201ENSMUST00000039620 1170 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trbv16A0A0B4J1H3 Cited4-201ENSMUST00000094814 1249 ntAPPRIS P1 BASIC14.53□□□□□ -0.08
Trbv16A0A0B4J1H3 A830092H15Rik-201ENSMUST00000099182 1229 ntBASIC14.53□□□□□ -0.08
Trbv16A0A0B4J1H3 Fmnl2-204ENSMUST00000127122 5508 ntTSL 5 BASIC14.53□□□□□ -0.08
Trbv16A0A0B4J1H3 Gm26837-201ENSMUST00000180821 2110 ntTSL 5 BASIC14.53□□□□□ -0.08
Trbv16A0A0B4J1H3 Cryzl1-203ENSMUST00000117644 1727 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
Trbv16A0A0B4J1H3 Htra2-201ENSMUST00000089645 1725 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.08
Trbv16A0A0B4J1H3 Gng12-203ENSMUST00000114224 680 ntAPPRIS P1 TSL 3 BASIC14.52□□□□□ -0.09
Trbv16A0A0B4J1H3 Gng12-206ENSMUST00000114227 1125 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Trbv16A0A0B4J1H3 Gm16599-201ENSMUST00000148082 1182 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Trbv16A0A0B4J1H3 Rasef-203ENSMUST00000222414 2127 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.09
Trbv16A0A0B4J1H3 4930524J08Rik-201ENSMUST00000046721 603 ntAPPRIS P1 BASIC14.52□□□□□ -0.09
Trbv16A0A0B4J1H3 Ak2-202ENSMUST00000102604 1781 ntAPPRIS ALT1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Trbv16A0A0B4J1H3 Laptm4a-201ENSMUST00000020909 1773 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Trbv16A0A0B4J1H3 Ccdc149-202ENSMUST00000198008 2470 ntTSL 5 BASIC14.52□□□□□ -0.09
Trbv16A0A0B4J1H3 Ints6-201ENSMUST00000053959 4993 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Trbv16A0A0B4J1H3 Pthlh-201ENSMUST00000052296 1603 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Trbv16A0A0B4J1H3 Kirrel3-202ENSMUST00000115148 2851 ntAPPRIS P3 TSL 5 BASIC14.52□□□□□ -0.09
Trbv16A0A0B4J1H3 Asph-217ENSMUST00000146441 2576 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Trbv16A0A0B4J1H3 Siah2-201ENSMUST00000070368 2511 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trbv16A0A0B4J1H3 Aplp1-201ENSMUST00000006828 2343 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trbv16A0A0B4J1H3 Gabbr1-201ENSMUST00000025338 5248 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trbv16A0A0B4J1H3 Prkar1b-201ENSMUST00000026973 2637 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trbv16A0A0B4J1H3 Vstm2b-201ENSMUST00000044705 2627 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
Trbv16A0A0B4J1H3 Ift57-201ENSMUST00000046777 2601 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trbv16A0A0B4J1H3 Sec24b-201ENSMUST00000001079 5128 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trbv16A0A0B4J1H3 Stn1-201ENSMUST00000049369 1992 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trbv16A0A0B4J1H3 Shisa5-202ENSMUST00000112059 1910 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trbv16A0A0B4J1H3 Zfp653-202ENSMUST00000179605 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trbv16A0A0B4J1H3 Atrn-201ENSMUST00000028781 8745 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trbv16A0A0B4J1H3 Fam216a-201ENSMUST00000031419 1388 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trbv16A0A0B4J1H3 Klhl8-201ENSMUST00000031254 3193 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trbv16A0A0B4J1H3 Rab28-203ENSMUST00000201422 1697 ntTSL 5 BASIC14.5□□□□□ -0.09
Trbv16A0A0B4J1H3 Spock1-204ENSMUST00000186271 2005 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trbv16A0A0B4J1H3 Golph3-202ENSMUST00000226517 2359 ntBASIC14.5□□□□□ -0.09
Retrieved 100 of 76,532 protein–RNA pairs in 15.9 ms