Protein–RNA interactions for Protein: A0A0A6YXT2

Ighv1-36, Immunoglobulin heavy variable 1-36 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ighv1-36A0A0A6YXT2 Syt5-201ENSMUST00000065957 1750 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Ighv1-36A0A0A6YXT2 6330403K07Rik-201ENSMUST00000156068 1494 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Ighv1-36A0A0A6YXT2 Baiap2-203ENSMUST00000103021 3398 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Ighv1-36A0A0A6YXT2 Hnrnpf-202ENSMUST00000163168 2401 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Ighv1-36A0A0A6YXT2 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
Ighv1-36A0A0A6YXT2 Zfp346-202ENSMUST00000159147 1146 ntTSL 5 BASIC16.35■□□□□ 0.21
Ighv1-36A0A0A6YXT2 Vegfa-211ENSMUST00000167860 975 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Ighv1-36A0A0A6YXT2 Vegfa-213ENSMUST00000217017 1179 ntAPPRIS P4 TSL 1 (best) BASIC16.35■□□□□ 0.21
Ighv1-36A0A0A6YXT2 Gm9767-201ENSMUST00000041011 1193 ntAPPRIS P1 BASIC16.35■□□□□ 0.21
Ighv1-36A0A0A6YXT2 Rabac1-201ENSMUST00000076961 899 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Ighv1-36A0A0A6YXT2 Pbx1-202ENSMUST00000072863 1709 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Ighv1-36A0A0A6YXT2 Vmn1r17-205ENSMUST00000228342 2230 ntAPPRIS P2 BASIC16.35■□□□□ 0.21
Ighv1-36A0A0A6YXT2 Cln5-201ENSMUST00000022721 2445 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Ighv1-36A0A0A6YXT2 Cyp4f15-201ENSMUST00000008801 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Ighv1-36A0A0A6YXT2 Kif27-203ENSMUST00000225388 5121 ntAPPRIS P1 BASIC16.34■□□□□ 0.21
Ighv1-36A0A0A6YXT2 Fgfrl1-202ENSMUST00000112560 2318 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Ighv1-36A0A0A6YXT2 Aplp1-201ENSMUST00000006828 2343 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Ighv1-36A0A0A6YXT2 Rhbdd3-201ENSMUST00000036320 1790 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Ighv1-36A0A0A6YXT2 Golph3-202ENSMUST00000226517 2359 ntBASIC16.34■□□□□ 0.21
Ighv1-36A0A0A6YXT2 Gadd45a-207ENSMUST00000204369 716 ntTSL 5 BASIC16.34■□□□□ 0.21
Ighv1-36A0A0A6YXT2 Shisa5-202ENSMUST00000112059 1910 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Ighv1-36A0A0A6YXT2 Supv3l1-201ENSMUST00000020273 2604 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Ighv1-36A0A0A6YXT2 Gpatch3-201ENSMUST00000030662 2004 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Ighv1-36A0A0A6YXT2 Kdm1a-203ENSMUST00000116273 3008 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
Ighv1-36A0A0A6YXT2 Klhl15-205ENSMUST00000113916 2363 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Ighv1-36A0A0A6YXT2 Aatf-201ENSMUST00000018841 1822 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Ighv1-36A0A0A6YXT2 Donson-203ENSMUST00000117159 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Ighv1-36A0A0A6YXT2 Txnrd2-201ENSMUST00000115604 1235 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Ighv1-36A0A0A6YXT2 Zfp629-208ENSMUST00000151107 583 ntTSL 3 BASIC16.33■□□□□ 0.2
Ighv1-36A0A0A6YXT2 Kcnip2-208ENSMUST00000161886 693 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
Ighv1-36A0A0A6YXT2 Gm35161-201ENSMUST00000221765 941 ntTSL 5 BASIC16.33■□□□□ 0.2
Ighv1-36A0A0A6YXT2 Gm7143-201ENSMUST00000222811 859 ntBASIC16.33■□□□□ 0.2
Ighv1-36A0A0A6YXT2 Vstm2b-201ENSMUST00000044705 2627 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
Ighv1-36A0A0A6YXT2 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
Ighv1-36A0A0A6YXT2 Tmcc1-202ENSMUST00000088896 5838 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Ighv1-36A0A0A6YXT2 Slc36a4-202ENSMUST00000115588 1745 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Ighv1-36A0A0A6YXT2 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Ighv1-36A0A0A6YXT2 Mtfmt-201ENSMUST00000074792 2042 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Ighv1-36A0A0A6YXT2 Ung-202ENSMUST00000102584 2136 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
Ighv1-36A0A0A6YXT2 Mroh6-201ENSMUST00000184858 2216 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
Ighv1-36A0A0A6YXT2 Tcf7l1-201ENSMUST00000069536 3042 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
Ighv1-36A0A0A6YXT2 Hs2st1-201ENSMUST00000043325 6177 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Ighv1-36A0A0A6YXT2 Vamp4-204ENSMUST00000135241 1461 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Ighv1-36A0A0A6YXT2 Gpx7-202ENSMUST00000184609 331 ntTSL 3 BASIC16.32■□□□□ 0.2
Ighv1-36A0A0A6YXT2 Rasef-203ENSMUST00000222414 2127 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
Ighv1-36A0A0A6YXT2 Rem1-201ENSMUST00000000369 1663 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Ighv1-36A0A0A6YXT2 Slc35b2-201ENSMUST00000041353 2326 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Ighv1-36A0A0A6YXT2 Hpdl-201ENSMUST00000055436 1804 ntAPPRIS P1 BASIC16.32■□□□□ 0.2
Ighv1-36A0A0A6YXT2 Bcas2-201ENSMUST00000005830 1467 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Ighv1-36A0A0A6YXT2 Htr6-201ENSMUST00000068036 1362 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Ighv1-36A0A0A6YXT2 Zfp777-202ENSMUST00000114583 3111 ntAPPRIS P3 TSL 5 BASIC16.32■□□□□ 0.2
Ighv1-36A0A0A6YXT2 Man1a-203ENSMUST00000105470 2847 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
Ighv1-36A0A0A6YXT2 Siah2-201ENSMUST00000070368 2511 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Ighv1-36A0A0A6YXT2 Rfk-201ENSMUST00000025617 2482 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Ighv1-36A0A0A6YXT2 Dtnb-216ENSMUST00000173736 2175 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
Ighv1-36A0A0A6YXT2 Hcn4-201ENSMUST00000034889 6118 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Ighv1-36A0A0A6YXT2 Rbm38-201ENSMUST00000029014 1768 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Ighv1-36A0A0A6YXT2 Rhov-201ENSMUST00000037360 1703 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Ighv1-36A0A0A6YXT2 Foxj3-206ENSMUST00000138845 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Ighv1-36A0A0A6YXT2 Kirrel3-202ENSMUST00000115148 2851 ntAPPRIS P3 TSL 5 BASIC16.31■□□□□ 0.2
Ighv1-36A0A0A6YXT2 AC166356.1-201ENSMUST00000228236 1426 ntBASIC16.31■□□□□ 0.2
Ighv1-36A0A0A6YXT2 Timm8a1-201ENSMUST00000054213 1421 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Ighv1-36A0A0A6YXT2 Maz-203ENSMUST00000205568 2650 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
Ighv1-36A0A0A6YXT2 Ltb-203ENSMUST00000173600 905 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
Ighv1-36A0A0A6YXT2 Gm40881-201ENSMUST00000223397 166 ntBASIC16.31■□□□□ 0.2
Ighv1-36A0A0A6YXT2 Klhl8-201ENSMUST00000031254 3193 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Ighv1-36A0A0A6YXT2 Exosc4-201ENSMUST00000059045 1796 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Ighv1-36A0A0A6YXT2 Stx18-202ENSMUST00000042146 1473 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Ighv1-36A0A0A6YXT2 Cnbp-208ENSMUST00000204653 2175 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Ighv1-36A0A0A6YXT2 Cnbp-201ENSMUST00000032138 2178 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Ighv1-36A0A0A6YXT2 Schip1-205ENSMUST00000182532 2059 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Ighv1-36A0A0A6YXT2 Cers1-203ENSMUST00000165819 2728 ntAPPRIS P4 TSL 1 (best) BASIC16.3■□□□□ 0.2
Ighv1-36A0A0A6YXT2 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC16.3■□□□□ 0.2
Ighv1-36A0A0A6YXT2 Fam98c-209ENSMUST00000164589 1293 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
Ighv1-36A0A0A6YXT2 Nnat-207ENSMUST00000173041 760 ntTSL 5 BASIC16.3■□□□□ 0.2
Ighv1-36A0A0A6YXT2 Ppp1r35-201ENSMUST00000031739 956 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Ighv1-36A0A0A6YXT2 Pbx1-201ENSMUST00000064438 1020 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Ighv1-36A0A0A6YXT2 Stk3-202ENSMUST00000067033 2471 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Ighv1-36A0A0A6YXT2 Rbm7-201ENSMUST00000170000 1773 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Ighv1-36A0A0A6YXT2 Hmg20b-203ENSMUST00000105324 1540 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Ighv1-36A0A0A6YXT2 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
Ighv1-36A0A0A6YXT2 Whrn-204ENSMUST00000095037 2419 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Ighv1-36A0A0A6YXT2 Hipk1-201ENSMUST00000029438 4185 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Ighv1-36A0A0A6YXT2 Pacsin2-201ENSMUST00000056177 2795 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Ighv1-36A0A0A6YXT2 Dedd2-201ENSMUST00000058702 1828 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Ighv1-36A0A0A6YXT2 Noa1-201ENSMUST00000047860 2288 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Ighv1-36A0A0A6YXT2 Laptm4a-201ENSMUST00000020909 1773 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Ighv1-36A0A0A6YXT2 Gm16933-201ENSMUST00000141741 2169 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Ighv1-36A0A0A6YXT2 Mrps16-201ENSMUST00000061444 2572 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Ighv1-36A0A0A6YXT2 Tsc22d1-203ENSMUST00000101618 1043 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Ighv1-36A0A0A6YXT2 Pdgfa-204ENSMUST00000110897 1287 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
Ighv1-36A0A0A6YXT2 Tmem127-202ENSMUST00000174288 842 ntTSL 2 BASIC16.29■□□□□ 0.2
Ighv1-36A0A0A6YXT2 Barx1-201ENSMUST00000021813 1399 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Ighv1-36A0A0A6YXT2 Spc24-201ENSMUST00000098942 1366 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Ighv1-36A0A0A6YXT2 Ppp1r16a-201ENSMUST00000037551 2692 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Ighv1-36A0A0A6YXT2 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Ighv1-36A0A0A6YXT2 Tmem230-206ENSMUST00000180286 1531 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
Ighv1-36A0A0A6YXT2 Letm2-209ENSMUST00000210810 1538 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Ighv1-36A0A0A6YXT2 Arhgap23-201ENSMUST00000093940 2409 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Ighv1-36A0A0A6YXT2 Zfp213-201ENSMUST00000095606 2672 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 21.6 ms