Protein–RNA interactions for Protein: A0A0A6YXC3

Ighv1-52, Immunoglobulin heavy variable 1-52 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ighv1-52A0A0A6YXC3 Stk3-202ENSMUST00000067033 2471 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Ighv1-52A0A0A6YXC3 Map4k3-201ENSMUST00000025089 4225 ntAPPRIS P2 TSL 5 BASIC15.31■□□□□ 0.04
Ighv1-52A0A0A6YXC3 Gm8770-201ENSMUST00000121113 1109 ntBASIC15.31■□□□□ 0.04
Ighv1-52A0A0A6YXC3 Spr-203ENSMUST00000174769 1029 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Ighv1-52A0A0A6YXC3 D630002J18Rik-201ENSMUST00000181854 1115 ntBASIC15.31■□□□□ 0.04
Ighv1-52A0A0A6YXC3 Tmem191c-213ENSMUST00000164950 1394 ntAPPRIS P1 TSL 3 BASIC15.31■□□□□ 0.04
Ighv1-52A0A0A6YXC3 Cotl1-202ENSMUST00000168698 1520 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Ighv1-52A0A0A6YXC3 Spsb3-204ENSMUST00000119829 1955 ntAPPRIS ALT2 TSL 2 BASIC15.31■□□□□ 0.04
Ighv1-52A0A0A6YXC3 Zfp639-202ENSMUST00000191783 1988 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Ighv1-52A0A0A6YXC3 Ntf5-201ENSMUST00000058879 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Ighv1-52A0A0A6YXC3 Pth1r-201ENSMUST00000006005 2307 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Ighv1-52A0A0A6YXC3 Pfdn4-204ENSMUST00000109148 736 ntTSL 3 BASIC15.3■□□□□ 0.04
Ighv1-52A0A0A6YXC3 Tead4-202ENSMUST00000112157 1909 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Ighv1-52A0A0A6YXC3 Creb1-204ENSMUST00000185594 1569 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
Ighv1-52A0A0A6YXC3 Rnf187-202ENSMUST00000217262 711 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Ighv1-52A0A0A6YXC3 Rspo1-201ENSMUST00000030687 1834 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Ighv1-52A0A0A6YXC3 Zfp3-201ENSMUST00000060444 2061 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Ighv1-52A0A0A6YXC3 Pkig-202ENSMUST00000099105 640 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
Ighv1-52A0A0A6YXC3 Cnp-201ENSMUST00000103120 2357 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Ighv1-52A0A0A6YXC3 Tinagl1-202ENSMUST00000105998 1976 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Ighv1-52A0A0A6YXC3 Naa20-202ENSMUST00000110000 1142 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Ighv1-52A0A0A6YXC3 Dynlt1f-201ENSMUST00000179554 807 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Ighv1-52A0A0A6YXC3 Gltpd2-201ENSMUST00000057685 1216 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Ighv1-52A0A0A6YXC3 Aktip-202ENSMUST00000120213 2200 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Ighv1-52A0A0A6YXC3 Mgat5b-201ENSMUST00000103027 4258 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
Ighv1-52A0A0A6YXC3 Bcl10-201ENSMUST00000029842 1949 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Ighv1-52A0A0A6YXC3 Kcnn2-203ENSMUST00000169783 1625 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Ighv1-52A0A0A6YXC3 Fezf2-203ENSMUST00000224714 2429 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
Ighv1-52A0A0A6YXC3 Barhl1-203ENSMUST00000113849 2102 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Ighv1-52A0A0A6YXC3 Pick1-204ENSMUST00000163571 2054 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
Ighv1-52A0A0A6YXC3 3110053B16Rik-202ENSMUST00000140360 2004 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Ighv1-52A0A0A6YXC3 Gpatch3-201ENSMUST00000030662 2004 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Ighv1-52A0A0A6YXC3 Dennd6a-202ENSMUST00000203874 2677 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Ighv1-52A0A0A6YXC3 Mir6236-201ENSMUST00000184437 123 ntBASIC15.28■□□□□ 0.04
Ighv1-52A0A0A6YXC3 1110065P20Rik-206ENSMUST00000185036 1223 ntTSL 2 BASIC15.28■□□□□ 0.04
Ighv1-52A0A0A6YXC3 Slc39a7-203ENSMUST00000169397 2107 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
Ighv1-52A0A0A6YXC3 Gfi1-202ENSMUST00000065478 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Ighv1-52A0A0A6YXC3 Pcgf6-201ENSMUST00000026032 2098 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Ighv1-52A0A0A6YXC3 Idh3a-205ENSMUST00000217484 2580 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Ighv1-52A0A0A6YXC3 Gpr62-201ENSMUST00000164834 1977 ntAPPRIS P1 BASIC15.27■□□□□ 0.04
Ighv1-52A0A0A6YXC3 Dleu2-203ENSMUST00000182259 1437 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Ighv1-52A0A0A6YXC3 Gm43034-201ENSMUST00000198678 1364 ntBASIC15.27■□□□□ 0.04
Ighv1-52A0A0A6YXC3 Zbtb7a-203ENSMUST00000119606 1841 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Ighv1-52A0A0A6YXC3 Foxo3-202ENSMUST00000105501 1316 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Ighv1-52A0A0A6YXC3 Snrpb-201ENSMUST00000103199 1161 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Ighv1-52A0A0A6YXC3 Siglec15-201ENSMUST00000170760 1156 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Ighv1-52A0A0A6YXC3 Gm9207-201ENSMUST00000198773 1115 ntBASIC15.27■□□□□ 0.04
Ighv1-52A0A0A6YXC3 6330562C20Rik-201ENSMUST00000098867 784 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Ighv1-52A0A0A6YXC3 Spry1-201ENSMUST00000038569 2481 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Ighv1-52A0A0A6YXC3 Notum-203ENSMUST00000106178 2012 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Ighv1-52A0A0A6YXC3 Ubl3-202ENSMUST00000164904 2001 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Ighv1-52A0A0A6YXC3 Lmo2-208ENSMUST00000170926 1529 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.03
Ighv1-52A0A0A6YXC3 Aplf-201ENSMUST00000032130 1889 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Ighv1-52A0A0A6YXC3 Marc1-202ENSMUST00000110992 2152 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
Ighv1-52A0A0A6YXC3 Ets1-202ENSMUST00000050797 1976 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Ighv1-52A0A0A6YXC3 Gm10125-201ENSMUST00000074702 2286 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Ighv1-52A0A0A6YXC3 Ppp1cb-206ENSMUST00000202078 383 ntTSL 5 BASIC15.26■□□□□ 0.03
Ighv1-52A0A0A6YXC3 Bri3-201ENSMUST00000056578 955 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Ighv1-52A0A0A6YXC3 Hoxd1-201ENSMUST00000047793 1862 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Ighv1-52A0A0A6YXC3 6430573P05Rik-203ENSMUST00000195547 2457 ntBASIC15.26■□□□□ 0.03
Ighv1-52A0A0A6YXC3 Setd4-202ENSMUST00000113951 1826 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
Ighv1-52A0A0A6YXC3 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Ighv1-52A0A0A6YXC3 Mettl25-201ENSMUST00000046638 2033 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Ighv1-52A0A0A6YXC3 Meg3-207ENSMUST00000143836 1896 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Ighv1-52A0A0A6YXC3 Tex264-202ENSMUST00000163441 1896 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Ighv1-52A0A0A6YXC3 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Ighv1-52A0A0A6YXC3 Prkar1b-201ENSMUST00000026973 2637 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Ighv1-52A0A0A6YXC3 Scube1-202ENSMUST00000043634 5161 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Ighv1-52A0A0A6YXC3 Tusc2-203ENSMUST00000193418 410 ntTSL 3 BASIC15.25■□□□□ 0.03
Ighv1-52A0A0A6YXC3 N4bp2os-203ENSMUST00000202673 699 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Ighv1-52A0A0A6YXC3 5031439G07Rik-201ENSMUST00000047144 6845 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Ighv1-52A0A0A6YXC3 Bin1-201ENSMUST00000025239 2451 ntAPPRIS P3 TSL 2 BASIC15.25■□□□□ 0.03
Ighv1-52A0A0A6YXC3 Dbf4-207ENSMUST00000171808 2402 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
Ighv1-52A0A0A6YXC3 Kcnk15-202ENSMUST00000109396 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Ighv1-52A0A0A6YXC3 AA543186-201ENSMUST00000180841 1696 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Ighv1-52A0A0A6YXC3 Slc9a3r2-201ENSMUST00000002572 2118 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Ighv1-52A0A0A6YXC3 Hck-202ENSMUST00000109799 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Ighv1-52A0A0A6YXC3 Hck-203ENSMUST00000189688 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Ighv1-52A0A0A6YXC3 Hck-201ENSMUST00000003370 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Ighv1-52A0A0A6YXC3 Nr0b1-201ENSMUST00000026036 1808 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Ighv1-52A0A0A6YXC3 Cnnm4-201ENSMUST00000153128 4547 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Ighv1-52A0A0A6YXC3 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC15.24■□□□□ 0.03
Ighv1-52A0A0A6YXC3 Exosc4-201ENSMUST00000059045 1796 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Ighv1-52A0A0A6YXC3 Tusc3-203ENSMUST00000209440 1535 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Ighv1-52A0A0A6YXC3 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Ighv1-52A0A0A6YXC3 Inpp5a-201ENSMUST00000026550 2774 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Ighv1-52A0A0A6YXC3 Kiss1-205ENSMUST00000195286 656 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Ighv1-52A0A0A6YXC3 Serbp1-212ENSMUST00000204294 717 ntTSL 5 BASIC15.24■□□□□ 0.03
Ighv1-52A0A0A6YXC3 AC140930.3-201ENSMUST00000222935 274 ntBASIC15.24■□□□□ 0.03
Ighv1-52A0A0A6YXC3 Cntfr-203ENSMUST00000102961 1995 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Ighv1-52A0A0A6YXC3 Wnt11-205ENSMUST00000167303 1792 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Ighv1-52A0A0A6YXC3 Tead2-201ENSMUST00000033060 2140 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
Ighv1-52A0A0A6YXC3 D830036C21Rik-202ENSMUST00000208263 1548 ntBASIC15.23■□□□□ 0.03
Ighv1-52A0A0A6YXC3 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Ighv1-52A0A0A6YXC3 Gm20522-201ENSMUST00000173576 784 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Ighv1-52A0A0A6YXC3 Mapkapk3-208ENSMUST00000192054 944 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Ighv1-52A0A0A6YXC3 Hyi-205ENSMUST00000194248 936 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Ighv1-52A0A0A6YXC3 Cyc1-201ENSMUST00000023210 1194 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Ighv1-52A0A0A6YXC3 Snhg20-203ENSMUST00000182811 2153 ntBASIC15.23■□□□□ 0.03
Ighv1-52A0A0A6YXC3 Pold2-201ENSMUST00000102922 1646 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 16.4 ms