Protein–RNA interactions for Protein: A0A075B6C4

Trav21-dv12, T cell receptor alpha variable 21-DV12 (Fragment), mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav21-dv12A0A075B6C4 Gm15820-201ENSMUST00000201566 728 ntBASIC15.42■□□□□ 0.06
Trav21-dv12A0A075B6C4 Fam149b-201ENSMUST00000037698 924 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Trav21-dv12A0A075B6C4 Ttc36-201ENSMUST00000044694 888 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Trav21-dv12A0A075B6C4 Tmem263-201ENSMUST00000095383 3616 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Trav21-dv12A0A075B6C4 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Trav21-dv12A0A075B6C4 Rxrb-201ENSMUST00000044858 2623 ntAPPRIS P4 TSL 1 (best) BASIC15.42■□□□□ 0.06
Trav21-dv12A0A075B6C4 Adcy3-202ENSMUST00000124505 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Trav21-dv12A0A075B6C4 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC15.41■□□□□ 0.06
Trav21-dv12A0A075B6C4 Serbp1-207ENSMUST00000203436 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Trav21-dv12A0A075B6C4 Fam19a5-201ENSMUST00000068088 2575 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Trav21-dv12A0A075B6C4 Tnrc18-201ENSMUST00000151477 6487 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Trav21-dv12A0A075B6C4 Slc30a2-203ENSMUST00000105873 1224 ntTSL 5 BASIC15.41■□□□□ 0.06
Trav21-dv12A0A075B6C4 0610009L18Rik-201ENSMUST00000143813 619 ntTSL 2 BASIC15.41■□□□□ 0.06
Trav21-dv12A0A075B6C4 Rem2-201ENSMUST00000164697 1194 ntTSL 5 BASIC15.41■□□□□ 0.06
Trav21-dv12A0A075B6C4 Gadd45a-207ENSMUST00000204369 716 ntTSL 5 BASIC15.41■□□□□ 0.06
Trav21-dv12A0A075B6C4 Gm18755-201ENSMUST00000218030 1099 ntBASIC15.41■□□□□ 0.06
Trav21-dv12A0A075B6C4 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Trav21-dv12A0A075B6C4 Mal2-201ENSMUST00000025356 2950 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Trav21-dv12A0A075B6C4 Pkmyt1-201ENSMUST00000024701 2039 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Trav21-dv12A0A075B6C4 Mum1-201ENSMUST00000020365 2640 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Trav21-dv12A0A075B6C4 Cep78-201ENSMUST00000047704 2548 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Trav21-dv12A0A075B6C4 AC152827.1-201ENSMUST00000221143 2189 ntBASIC15.41■□□□□ 0.06
Trav21-dv12A0A075B6C4 Slc26a10-201ENSMUST00000095270 2215 ntAPPRIS P2 TSL 5 BASIC15.4■□□□□ 0.06
Trav21-dv12A0A075B6C4 Zfp653-202ENSMUST00000179605 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Trav21-dv12A0A075B6C4 Uqcrfs1-201ENSMUST00000042834 1363 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Trav21-dv12A0A075B6C4 Ube2e3-202ENSMUST00000121433 1235 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
Trav21-dv12A0A075B6C4 Phf2os1-201ENSMUST00000123212 498 ntTSL 3 BASIC15.4■□□□□ 0.06
Trav21-dv12A0A075B6C4 Gm40881-201ENSMUST00000223397 166 ntBASIC15.4■□□□□ 0.06
Trav21-dv12A0A075B6C4 Sephs2-201ENSMUST00000082428 2177 ntAPPRIS P1 BASIC15.4■□□□□ 0.06
Trav21-dv12A0A075B6C4 Sec24b-201ENSMUST00000001079 5128 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Trav21-dv12A0A075B6C4 Ache-209ENSMUST00000196208 1911 ntTSL 5 BASIC15.4■□□□□ 0.06
Trav21-dv12A0A075B6C4 Triobp-202ENSMUST00000109688 2553 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Trav21-dv12A0A075B6C4 Stau2-217ENSMUST00000162751 3030 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Trav21-dv12A0A075B6C4 Becn1-217ENSMUST00000172233 1493 ntTSL 5 BASIC15.4■□□□□ 0.06
Trav21-dv12A0A075B6C4 Set-201ENSMUST00000067996 2834 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.06
Trav21-dv12A0A075B6C4 Rell2-210ENSMUST00000176104 2150 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
Trav21-dv12A0A075B6C4 Lrrc38-201ENSMUST00000052458 2324 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Trav21-dv12A0A075B6C4 Prrt1-201ENSMUST00000015620 1940 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
Trav21-dv12A0A075B6C4 Htr6-201ENSMUST00000068036 1362 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Trav21-dv12A0A075B6C4 Plekhm2-201ENSMUST00000030751 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Trav21-dv12A0A075B6C4 Prkar2b-201ENSMUST00000003079 1657 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Trav21-dv12A0A075B6C4 Gramd1a-202ENSMUST00000085636 2543 ntAPPRIS ALT2 TSL 5 BASIC15.39■□□□□ 0.05
Trav21-dv12A0A075B6C4 Rspo1-201ENSMUST00000030687 1834 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Trav21-dv12A0A075B6C4 Zfp346-202ENSMUST00000159147 1146 ntTSL 5 BASIC15.39■□□□□ 0.05
Trav21-dv12A0A075B6C4 Nnat-207ENSMUST00000173041 760 ntTSL 5 BASIC15.39■□□□□ 0.05
Trav21-dv12A0A075B6C4 4930426I24Rik-202ENSMUST00000217797 1232 ntBASIC15.39■□□□□ 0.05
Trav21-dv12A0A075B6C4 A930002H24Rik-201ENSMUST00000050753 492 ntAPPRIS P1 BASIC15.39■□□□□ 0.05
Trav21-dv12A0A075B6C4 Chkb-201ENSMUST00000023289 1707 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Trav21-dv12A0A075B6C4 Tead1-204ENSMUST00000106638 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Trav21-dv12A0A075B6C4 Dpf1-201ENSMUST00000049977 2309 ntAPPRIS P2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Trav21-dv12A0A075B6C4 Ezh2-201ENSMUST00000081721 2787 ntAPPRIS P2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Trav21-dv12A0A075B6C4 Msl3l2-201ENSMUST00000063138 2140 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Trav21-dv12A0A075B6C4 4930507D05Rik-201ENSMUST00000181110 1834 ntAPPRIS P1 BASIC15.38■□□□□ 0.05
Trav21-dv12A0A075B6C4 K230010J24Rik-204ENSMUST00000187868 1810 ntAPPRIS P1 TSL 5 BASIC15.38■□□□□ 0.05
Trav21-dv12A0A075B6C4 Zfp697-201ENSMUST00000056096 5166 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Trav21-dv12A0A075B6C4 Ube2d2a-202ENSMUST00000170693 2483 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Trav21-dv12A0A075B6C4 Phc2-202ENSMUST00000106079 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Trav21-dv12A0A075B6C4 Ssbp1-205ENSMUST00000121360 1188 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Trav21-dv12A0A075B6C4 Trir-201ENSMUST00000047281 902 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Trav21-dv12A0A075B6C4 Kl-201ENSMUST00000078856 5118 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Trav21-dv12A0A075B6C4 Picalm-215ENSMUST00000209068 3511 ntAPPRIS ALT2 TSL 5 BASIC15.38■□□□□ 0.05
Trav21-dv12A0A075B6C4 Sept5-201ENSMUST00000096987 2127 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Trav21-dv12A0A075B6C4 Setd4-202ENSMUST00000113951 1826 ntAPPRIS P1 TSL 5 BASIC15.38■□□□□ 0.05
Trav21-dv12A0A075B6C4 Riox1-201ENSMUST00000053744 2344 ntAPPRIS P1 BASIC15.38■□□□□ 0.05
Trav21-dv12A0A075B6C4 Fam207a-201ENSMUST00000045454 2394 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Trav21-dv12A0A075B6C4 3830408C21Rik-205ENSMUST00000225426 1898 ntBASIC15.37■□□□□ 0.05
Trav21-dv12A0A075B6C4 Tmem51-201ENSMUST00000036572 1875 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Trav21-dv12A0A075B6C4 Shox2-201ENSMUST00000029422 3079 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Trav21-dv12A0A075B6C4 Dmrta2-201ENSMUST00000061187 2922 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Trav21-dv12A0A075B6C4 Ulk2-201ENSMUST00000004920 5743 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Trav21-dv12A0A075B6C4 Celf6-202ENSMUST00000118164 1583 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Trav21-dv12A0A075B6C4 Arhgap23-203ENSMUST00000121799 5816 ntAPPRIS P1 TSL 5 BASIC15.37■□□□□ 0.05
Trav21-dv12A0A075B6C4 Vav2-201ENSMUST00000056176 5221 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Trav21-dv12A0A075B6C4 Bub3-205ENSMUST00000208571 747 ntTSL 5 BASIC15.37■□□□□ 0.05
Trav21-dv12A0A075B6C4 Rab4b-201ENSMUST00000093040 1192 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Trav21-dv12A0A075B6C4 Lsr-205ENSMUST00000205961 2021 ntAPPRIS P3 TSL 1 (best) BASIC15.37■□□□□ 0.05
Trav21-dv12A0A075B6C4 Zfp105-201ENSMUST00000051667 2010 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Trav21-dv12A0A075B6C4 Ints6-201ENSMUST00000053959 4993 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Trav21-dv12A0A075B6C4 Panx1-202ENSMUST00000164273 5732 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Trav21-dv12A0A075B6C4 Letm2-201ENSMUST00000079160 2126 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Trav21-dv12A0A075B6C4 Gm572-201ENSMUST00000105698 1385 ntAPPRIS P1 TSL 5 BASIC15.36■□□□□ 0.05
Trav21-dv12A0A075B6C4 Wtap-204ENSMUST00000159986 3187 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Trav21-dv12A0A075B6C4 Calml3-201ENSMUST00000077698 1421 ntAPPRIS P1 BASIC15.36■□□□□ 0.05
Trav21-dv12A0A075B6C4 Ankrd17-214ENSMUST00000218526 4938 ntTSL 5 BASIC15.36■□□□□ 0.05
Trav21-dv12A0A075B6C4 Notumos-201ENSMUST00000151998 2659 ntBASIC15.36■□□□□ 0.05
Trav21-dv12A0A075B6C4 Tfap2e-201ENSMUST00000048194 2085 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Trav21-dv12A0A075B6C4 Zbtb7a-202ENSMUST00000117956 1863 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Trav21-dv12A0A075B6C4 Aif1l-201ENSMUST00000001920 3117 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Trav21-dv12A0A075B6C4 Dusp22-203ENSMUST00000110310 2319 ntTSL 2 BASIC15.36■□□□□ 0.05
Trav21-dv12A0A075B6C4 Gm2464-202ENSMUST00000194841 877 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Trav21-dv12A0A075B6C4 Pbx1-201ENSMUST00000064438 1020 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Trav21-dv12A0A075B6C4 Nfkbib-202ENSMUST00000085851 1243 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Trav21-dv12A0A075B6C4 Eif3j2-201ENSMUST00000057110 2379 ntAPPRIS P1 BASIC15.36■□□□□ 0.05
Trav21-dv12A0A075B6C4 Hras-201ENSMUST00000026572 2828 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Trav21-dv12A0A075B6C4 Krt5-201ENSMUST00000023709 2190 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Trav21-dv12A0A075B6C4 Hmg20b-203ENSMUST00000105324 1540 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Trav21-dv12A0A075B6C4 Ntn5-202ENSMUST00000182750 1758 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Trav21-dv12A0A075B6C4 Mmp15-201ENSMUST00000034243 5135 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Trav21-dv12A0A075B6C4 Ercc6l2-208ENSMUST00000144763 1820 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Trav21-dv12A0A075B6C4 Alkbh5-201ENSMUST00000044250 5730 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Retrieved 100 of 76,532 protein–RNA pairs in 52.1 ms