Protein–RNA interactions for Protein: A0A075B6B4

Trav6-4, T cell receptor alpha variable 6-4 (Fragment), mousemouse

Predictions only

Length 115 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6-4A0A075B6B4 Ankrd33b-202ENSMUST00000076942 1641 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
Trav6-4A0A075B6B4 6330403K07Rik-201ENSMUST00000156068 1494 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
Trav6-4A0A075B6B4 Tmprss5-205ENSMUST00000170246 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
Trav6-4A0A075B6B4 Stx18-202ENSMUST00000042146 1473 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
Trav6-4A0A075B6B4 Marc1-202ENSMUST00000110992 2152 ntAPPRIS ALT2 TSL 5 BASIC15.46■□□□□ 0.07
Trav6-4A0A075B6B4 Rfx8-202ENSMUST00000151913 2008 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Trav6-4A0A075B6B4 Map2k2-202ENSMUST00000105331 1556 ntAPPRIS ALT1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Trav6-4A0A075B6B4 Msantd3-203ENSMUST00000107704 1597 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Trav6-4A0A075B6B4 Pias2-202ENSMUST00000114777 4968 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
Trav6-4A0A075B6B4 0610010K14Rik-209ENSMUST00000108579 667 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
Trav6-4A0A075B6B4 Gm15202-201ENSMUST00000154188 393 ntTSL 3 BASIC15.46■□□□□ 0.07
Trav6-4A0A075B6B4 4930439D14Rik-201ENSMUST00000186765 359 ntBASIC15.46■□□□□ 0.07
Trav6-4A0A075B6B4 Gm43530-201ENSMUST00000195920 274 ntBASIC15.46■□□□□ 0.07
Trav6-4A0A075B6B4 Sdhaf1-201ENSMUST00000098586 2490 ntAPPRIS P1 BASIC15.46■□□□□ 0.07
Trav6-4A0A075B6B4 A030001D20Rik-201ENSMUST00000211533 1542 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
Trav6-4A0A075B6B4 Ccne1-201ENSMUST00000108023 2000 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Trav6-4A0A075B6B4 Cnp-201ENSMUST00000103120 2357 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
Trav6-4A0A075B6B4 Spry1-201ENSMUST00000038569 2481 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Trav6-4A0A075B6B4 Rap1a-201ENSMUST00000090678 2407 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Trav6-4A0A075B6B4 Ache-209ENSMUST00000196208 1911 ntTSL 5 BASIC15.45■□□□□ 0.06
Trav6-4A0A075B6B4 Gnas-206ENSMUST00000109084 1695 ntAPPRIS ALT1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Trav6-4A0A075B6B4 Ntn5-202ENSMUST00000182750 1758 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Trav6-4A0A075B6B4 Ankra2-205ENSMUST00000150916 1028 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Trav6-4A0A075B6B4 Zfp963-202ENSMUST00000154063 640 ntTSL 3 BASIC15.45■□□□□ 0.06
Trav6-4A0A075B6B4 Gm9847-201ENSMUST00000052528 599 ntBASIC15.45■□□□□ 0.06
Trav6-4A0A075B6B4 Kmt5b-201ENSMUST00000005518 1283 ntAPPRIS ALT2 TSL 5 BASIC15.45■□□□□ 0.06
Trav6-4A0A075B6B4 Scand1-201ENSMUST00000079125 759 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Trav6-4A0A075B6B4 Stk3-202ENSMUST00000067033 2471 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Trav6-4A0A075B6B4 Spsb3-204ENSMUST00000119829 1955 ntAPPRIS ALT2 TSL 2 BASIC15.44■□□□□ 0.06
Trav6-4A0A075B6B4 Frat1-201ENSMUST00000087155 2614 ntAPPRIS P1 BASIC15.44■□□□□ 0.06
Trav6-4A0A075B6B4 1700016H13Rik-205ENSMUST00000134926 1104 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Trav6-4A0A075B6B4 Ppp1r18os-201ENSMUST00000145804 784 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Trav6-4A0A075B6B4 Sumf1-206ENSMUST00000172188 723 ntTSL 5 BASIC15.44■□□□□ 0.06
Trav6-4A0A075B6B4 Gm27151-202ENSMUST00000185015 1145 ntTSL 5 BASIC15.44■□□□□ 0.06
Trav6-4A0A075B6B4 Pth2-202ENSMUST00000210086 481 ntTSL 2 BASIC15.44■□□□□ 0.06
Trav6-4A0A075B6B4 Pawr-202ENSMUST00000218332 870 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
Trav6-4A0A075B6B4 Podxl-201ENSMUST00000026698 5379 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Trav6-4A0A075B6B4 Mettl25-201ENSMUST00000046638 2033 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Trav6-4A0A075B6B4 Ubtf-201ENSMUST00000006754 3213 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
Trav6-4A0A075B6B4 B430319F04Rik-201ENSMUST00000209731 2669 ntBASIC15.44■□□□□ 0.06
Trav6-4A0A075B6B4 Dbf4-207ENSMUST00000171808 2402 ntAPPRIS P3 TSL 1 (best) BASIC15.44■□□□□ 0.06
Trav6-4A0A075B6B4 Zfp523-201ENSMUST00000002318 2710 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Trav6-4A0A075B6B4 Gga1-201ENSMUST00000041587 3034 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Trav6-4A0A075B6B4 Kcnk1-202ENSMUST00000212831 1309 ntTSL 5 BASIC15.43■□□□□ 0.06
Trav6-4A0A075B6B4 Kcnn2-203ENSMUST00000169783 1625 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Trav6-4A0A075B6B4 Cryzl1-203ENSMUST00000117644 1727 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Trav6-4A0A075B6B4 Rxrb-203ENSMUST00000173354 1743 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
Trav6-4A0A075B6B4 Notum-203ENSMUST00000106178 2012 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Trav6-4A0A075B6B4 Slc39a7-203ENSMUST00000169397 2107 ntAPPRIS P1 TSL 5 BASIC15.43■□□□□ 0.06
Trav6-4A0A075B6B4 Aktip-202ENSMUST00000120213 2200 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Trav6-4A0A075B6B4 Kcnk1-201ENSMUST00000046765 2235 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Trav6-4A0A075B6B4 Prkar1b-201ENSMUST00000026973 2637 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Trav6-4A0A075B6B4 Bex1-202ENSMUST00000113118 754 ntAPPRIS P1 TSL 2 BASIC15.43■□□□□ 0.06
Trav6-4A0A075B6B4 Golgb1-201ENSMUST00000023534 498 ntBASIC15.43■□□□□ 0.06
Trav6-4A0A075B6B4 Hagh-201ENSMUST00000024974 1101 ntAPPRIS ALT1 TSL 5 BASIC15.43■□□□□ 0.06
Trav6-4A0A075B6B4 Stac3-202ENSMUST00000160019 1581 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Trav6-4A0A075B6B4 Tinagl1-202ENSMUST00000105998 1976 ntAPPRIS P2 TSL 1 (best) BASIC15.43■□□□□ 0.06
Trav6-4A0A075B6B4 Spry1-203ENSMUST00000108109 2451 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Trav6-4A0A075B6B4 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Trav6-4A0A075B6B4 Slc9a3r2-201ENSMUST00000002572 2118 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Trav6-4A0A075B6B4 3110053B16Rik-202ENSMUST00000140360 2004 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Trav6-4A0A075B6B4 Bcl10-201ENSMUST00000029842 1949 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Trav6-4A0A075B6B4 Dedd2-201ENSMUST00000058702 1828 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Trav6-4A0A075B6B4 Prmt1-202ENSMUST00000107843 1508 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Trav6-4A0A075B6B4 Cotl1-202ENSMUST00000168698 1520 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Trav6-4A0A075B6B4 Pafah1b1-201ENSMUST00000021091 5803 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Trav6-4A0A075B6B4 Arid1b-201ENSMUST00000092723 7150 ntAPPRIS ALT2 TSL 5 BASIC15.42■□□□□ 0.06
Trav6-4A0A075B6B4 Gm10125-201ENSMUST00000074702 2286 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Trav6-4A0A075B6B4 Pick1-204ENSMUST00000163571 2054 ntAPPRIS P1 TSL 5 BASIC15.42■□□□□ 0.06
Trav6-4A0A075B6B4 Pcgf6-201ENSMUST00000026032 2098 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Trav6-4A0A075B6B4 Fezf2-203ENSMUST00000224714 2429 ntAPPRIS P1 BASIC15.42■□□□□ 0.06
Trav6-4A0A075B6B4 Hsd17b3-202ENSMUST00000166224 1286 ntAPPRIS P1 TSL 2 BASIC15.42■□□□□ 0.06
Trav6-4A0A075B6B4 Krt8-ps-201ENSMUST00000208495 945 ntBASIC15.42■□□□□ 0.06
Trav6-4A0A075B6B4 Tead4-202ENSMUST00000112157 1909 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Trav6-4A0A075B6B4 Zfp36l1-202ENSMUST00000165114 1934 ntAPPRIS P1 TSL 5 BASIC15.42■□□□□ 0.06
Trav6-4A0A075B6B4 Art5-204ENSMUST00000106937 1713 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Trav6-4A0A075B6B4 Pank2-204ENSMUST00000150843 4266 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Trav6-4A0A075B6B4 Ubl3-202ENSMUST00000164904 2001 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Trav6-4A0A075B6B4 Hck-202ENSMUST00000109799 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Trav6-4A0A075B6B4 Hck-203ENSMUST00000189688 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Trav6-4A0A075B6B4 Hck-201ENSMUST00000003370 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Trav6-4A0A075B6B4 Cachd1-201ENSMUST00000030257 5765 ntAPPRIS P2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Trav6-4A0A075B6B4 Tmem120b-202ENSMUST00000111619 1256 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Trav6-4A0A075B6B4 Sdsl-202ENSMUST00000052258 1225 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Trav6-4A0A075B6B4 AC166356.1-201ENSMUST00000228236 1426 ntBASIC15.41■□□□□ 0.06
Trav6-4A0A075B6B4 Rnf44-208ENSMUST00000128257 1689 ntTSL 5 BASIC15.41■□□□□ 0.06
Trav6-4A0A075B6B4 Snhg20-203ENSMUST00000182811 2153 ntBASIC15.41■□□□□ 0.06
Trav6-4A0A075B6B4 Zfp618-201ENSMUST00000030043 1582 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Trav6-4A0A075B6B4 Zfp69-201ENSMUST00000106280 2362 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
Trav6-4A0A075B6B4 Barhl1-203ENSMUST00000113849 2102 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Trav6-4A0A075B6B4 Arhgap27os2-201ENSMUST00000123812 1390 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Trav6-4A0A075B6B4 Slc35a2-209ENSMUST00000208397 1374 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
Trav6-4A0A075B6B4 Tead2-201ENSMUST00000033060 2140 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
Trav6-4A0A075B6B4 Hoxd1-201ENSMUST00000047793 1862 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Trav6-4A0A075B6B4 Ccnjl-201ENSMUST00000050574 2672 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Trav6-4A0A075B6B4 Gm43759-201ENSMUST00000196925 1261 ntBASIC15.4■□□□□ 0.06
Trav6-4A0A075B6B4 3110082J24Rik-202ENSMUST00000199573 767 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Trav6-4A0A075B6B4 Fuz-214ENSMUST00000209132 853 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Trav6-4A0A075B6B4 Bcl2l10-201ENSMUST00000034709 1220 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Trav6-4A0A075B6B4 Mark2-202ENSMUST00000032557 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Retrieved 100 of 76,532 protein–RNA pairs in 15.4 ms