Protein–RNA interactions for Protein: A0A075B6A6

Trav6n-7, T cell receptor alpha variable 6N-7 (Fragment), mousemouse

Predictions only

Length 116 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6n-7A0A075B6A6 Elf2-212ENSMUST00000194641 5919 ntAPPRIS P3 TSL 5 BASIC17.09■□□□□ 0.33
Trav6n-7A0A075B6A6 Hck-202ENSMUST00000109799 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Trav6n-7A0A075B6A6 Hck-203ENSMUST00000189688 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Trav6n-7A0A075B6A6 Pcgf6-201ENSMUST00000026032 2098 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Trav6n-7A0A075B6A6 Hck-201ENSMUST00000003370 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Trav6n-7A0A075B6A6 Slc9a3r2-201ENSMUST00000002572 2118 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Trav6n-7A0A075B6A6 Slc9a7-201ENSMUST00000072451 2512 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Trav6n-7A0A075B6A6 Nr5a1-202ENSMUST00000112883 2994 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Trav6n-7A0A075B6A6 3110053B16Rik-202ENSMUST00000140360 2004 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
Trav6n-7A0A075B6A6 Gpatch3-201ENSMUST00000030662 2004 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Trav6n-7A0A075B6A6 Tmem191c-213ENSMUST00000164950 1394 ntAPPRIS P1 TSL 3 BASIC17.08■□□□□ 0.32
Trav6n-7A0A075B6A6 1700016H13Rik-205ENSMUST00000134926 1104 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Trav6n-7A0A075B6A6 Tcte2-209ENSMUST00000143162 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Trav6n-7A0A075B6A6 Sema6d-204ENSMUST00000078621 6372 ntTSL 5 BASIC17.08■□□□□ 0.32
Trav6n-7A0A075B6A6 Fezf2-203ENSMUST00000224714 2429 ntAPPRIS P1 BASIC17.08■□□□□ 0.32
Trav6n-7A0A075B6A6 Barhl1-203ENSMUST00000113849 2102 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Trav6n-7A0A075B6A6 Cntfr-203ENSMUST00000102961 1995 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Trav6n-7A0A075B6A6 Exosc4-201ENSMUST00000059045 1796 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Trav6n-7A0A075B6A6 AC166356.1-201ENSMUST00000228236 1426 ntBASIC17.07■□□□□ 0.32
Trav6n-7A0A075B6A6 Ier3ip1-201ENSMUST00000026487 1395 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Trav6n-7A0A075B6A6 Dynlt1f-201ENSMUST00000179554 807 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Trav6n-7A0A075B6A6 3110082J24Rik-202ENSMUST00000199573 767 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Trav6n-7A0A075B6A6 Bcl2l10-201ENSMUST00000034709 1220 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Trav6n-7A0A075B6A6 Gm13241-201ENSMUST00000094493 780 ntBASIC17.07■□□□□ 0.32
Trav6n-7A0A075B6A6 Ubl3-202ENSMUST00000164904 2001 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Trav6n-7A0A075B6A6 Gpr62-201ENSMUST00000164834 1977 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
Trav6n-7A0A075B6A6 Ets1-202ENSMUST00000050797 1976 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Trav6n-7A0A075B6A6 Meg3-207ENSMUST00000143836 1896 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Trav6n-7A0A075B6A6 Trp53rka-201ENSMUST00000039007 1880 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Trav6n-7A0A075B6A6 Hoxd1-201ENSMUST00000047793 1862 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Trav6n-7A0A075B6A6 Pdp1-204ENSMUST00000108299 2588 ntAPPRIS ALT2 TSL 2 BASIC17.07■□□□□ 0.32
Trav6n-7A0A075B6A6 Rspo1-201ENSMUST00000030687 1834 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Trav6n-7A0A075B6A6 Nrxn2-208ENSMUST00000137166 6314 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
Trav6n-7A0A075B6A6 Lgr4-201ENSMUST00000046548 5060 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
Trav6n-7A0A075B6A6 Slc35a2-209ENSMUST00000208397 1374 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
Trav6n-7A0A075B6A6 Map3k21-201ENSMUST00000034316 5693 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Trav6n-7A0A075B6A6 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Trav6n-7A0A075B6A6 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
Trav6n-7A0A075B6A6 Aplf-201ENSMUST00000032130 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Trav6n-7A0A075B6A6 Setd4-202ENSMUST00000113951 1826 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
Trav6n-7A0A075B6A6 Zbtb7a-203ENSMUST00000119606 1841 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Trav6n-7A0A075B6A6 1110065P20Rik-206ENSMUST00000185036 1223 ntTSL 2 BASIC17.06■□□□□ 0.32
Trav6n-7A0A075B6A6 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
Trav6n-7A0A075B6A6 Gm9934-201ENSMUST00000098303 2077 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Trav6n-7A0A075B6A6 Pth1r-201ENSMUST00000006005 2307 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Trav6n-7A0A075B6A6 Rnf26-206ENSMUST00000216511 2257 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
Trav6n-7A0A075B6A6 Cbln2-201ENSMUST00000068423 2475 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Trav6n-7A0A075B6A6 Prkab1-201ENSMUST00000031486 2089 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Trav6n-7A0A075B6A6 Siglec15-201ENSMUST00000170760 1156 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Trav6n-7A0A075B6A6 Rnf187-202ENSMUST00000217262 711 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Trav6n-7A0A075B6A6 Bri3-201ENSMUST00000056578 955 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Trav6n-7A0A075B6A6 Gltpd2-201ENSMUST00000057685 1216 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Trav6n-7A0A075B6A6 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Trav6n-7A0A075B6A6 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Trav6n-7A0A075B6A6 Bcl10-201ENSMUST00000029842 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Trav6n-7A0A075B6A6 Cotl1-202ENSMUST00000168698 1520 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Trav6n-7A0A075B6A6 Vstm4-201ENSMUST00000053175 2745 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Trav6n-7A0A075B6A6 Kcnn2-203ENSMUST00000169783 1625 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Trav6n-7A0A075B6A6 Htra2-202ENSMUST00000113962 1305 ntTSL 5 BASIC17.04■□□□□ 0.32
Trav6n-7A0A075B6A6 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
Trav6n-7A0A075B6A6 Snrpb-201ENSMUST00000103199 1161 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Trav6n-7A0A075B6A6 Gm8770-201ENSMUST00000121113 1109 ntBASIC17.04■□□□□ 0.32
Trav6n-7A0A075B6A6 Gm9207-201ENSMUST00000198773 1115 ntBASIC17.04■□□□□ 0.32
Trav6n-7A0A075B6A6 Fuz-214ENSMUST00000209132 853 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Trav6n-7A0A075B6A6 6330562C20Rik-201ENSMUST00000098867 784 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Trav6n-7A0A075B6A6 Ssx2ip-203ENSMUST00000106151 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Trav6n-7A0A075B6A6 Acsl3-203ENSMUST00000134566 2492 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Trav6n-7A0A075B6A6 Gm43034-201ENSMUST00000198678 1364 ntBASIC17.03■□□□□ 0.32
Trav6n-7A0A075B6A6 Wrnip1-201ENSMUST00000021832 2633 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Trav6n-7A0A075B6A6 Sema6d-202ENSMUST00000076335 6276 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Trav6n-7A0A075B6A6 Kctd9-201ENSMUST00000078053 3157 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Trav6n-7A0A075B6A6 Lmo2-208ENSMUST00000170926 1529 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
Trav6n-7A0A075B6A6 D630002J18Rik-201ENSMUST00000181854 1115 ntBASIC17.03■□□□□ 0.32
Trav6n-7A0A075B6A6 Zfp36l1-202ENSMUST00000165114 1934 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
Trav6n-7A0A075B6A6 Ubl3-201ENSMUST00000079324 2537 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Trav6n-7A0A075B6A6 Efcc1-201ENSMUST00000032132 2729 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
Trav6n-7A0A075B6A6 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.32
Trav6n-7A0A075B6A6 Cdc20-201ENSMUST00000006565 1793 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Trav6n-7A0A075B6A6 Cep78-201ENSMUST00000047704 2548 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Trav6n-7A0A075B6A6 Foxg1-201ENSMUST00000021333 2941 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Trav6n-7A0A075B6A6 AA543186-201ENSMUST00000180841 1696 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Trav6n-7A0A075B6A6 Gm43759-201ENSMUST00000196925 1261 ntBASIC17.02■□□□□ 0.32
Trav6n-7A0A075B6A6 Ppp1cb-206ENSMUST00000202078 383 ntTSL 5 BASIC17.02■□□□□ 0.32
Trav6n-7A0A075B6A6 Serbp1-212ENSMUST00000204294 717 ntTSL 5 BASIC17.02■□□□□ 0.32
Trav6n-7A0A075B6A6 AC140930.3-201ENSMUST00000222935 274 ntBASIC17.02■□□□□ 0.32
Trav6n-7A0A075B6A6 Pkig-202ENSMUST00000099105 640 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.32
Trav6n-7A0A075B6A6 Dleu2-203ENSMUST00000182259 1437 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
Trav6n-7A0A075B6A6 Gm9817-201ENSMUST00000054395 2531 ntAPPRIS P1 BASIC17.02■□□□□ 0.31
Trav6n-7A0A075B6A6 Wnt11-205ENSMUST00000167303 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Trav6n-7A0A075B6A6 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC17.02■□□□□ 0.31
Trav6n-7A0A075B6A6 Kcnk15-202ENSMUST00000109396 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.31
Trav6n-7A0A075B6A6 Acot3-203ENSMUST00000223080 1545 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Trav6n-7A0A075B6A6 Pold2-201ENSMUST00000102922 1646 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Trav6n-7A0A075B6A6 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Trav6n-7A0A075B6A6 Gm20522-201ENSMUST00000173576 784 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Trav6n-7A0A075B6A6 Gm21956-201ENSMUST00000179946 522 ntBASIC17.01■□□□□ 0.31
Trav6n-7A0A075B6A6 Kiss1-205ENSMUST00000195286 656 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Trav6n-7A0A075B6A6 Gm4553-202ENSMUST00000210925 1044 ntAPPRIS P5 BASIC17.01■□□□□ 0.31
Trav6n-7A0A075B6A6 AC122379.1-201ENSMUST00000220658 355 ntTSL 3 BASIC17.01■□□□□ 0.31
Trav6n-7A0A075B6A6 Tex264-202ENSMUST00000163441 1896 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Retrieved 100 of 76,532 protein–RNA pairs in 31.2 ms