Protein–RNA interactions for Protein: A0A075B6A4

Trav12d-3, T cell receptor alpha variable 12D-3 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav12d-3A0A075B6A4 Dolk-201ENSMUST00000100219 2104 ntAPPRIS P1 BASIC15.04■□□□□ -0
Trav12d-3A0A075B6A4 Txnrd2-213ENSMUST00000178093 1785 ntTSL 5 BASIC15.04■□□□□ -0
Trav12d-3A0A075B6A4 Ppa2-203ENSMUST00000122334 1368 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
Trav12d-3A0A075B6A4 Fam89a-201ENSMUST00000055257 1338 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Trav12d-3A0A075B6A4 Slc30a4-202ENSMUST00000099457 3170 ntTSL 1 (best) BASIC15.04■□□□□ -0
Trav12d-3A0A075B6A4 Homer2-201ENSMUST00000026922 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
Trav12d-3A0A075B6A4 Nrxn2-201ENSMUST00000077182 6059 ntAPPRIS ALT2 TSL 5 BASIC15.03■□□□□ -0
Trav12d-3A0A075B6A4 Hs3st5-202ENSMUST00000167191 2408 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Trav12d-3A0A075B6A4 Tceal3-202ENSMUST00000113100 1148 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Trav12d-3A0A075B6A4 Ptpn18-206ENSMUST00000188972 414 ntTSL 1 (best) BASIC15.03■□□□□ -0
Trav12d-3A0A075B6A4 Gm29254-202ENSMUST00000189302 883 ntTSL 1 (best) BASIC15.03■□□□□ -0
Trav12d-3A0A075B6A4 Kcnn2-208ENSMUST00000211323 2046 ntAPPRIS P2 TSL 1 (best) BASIC15.03■□□□□ -0
Trav12d-3A0A075B6A4 Plekhm2-202ENSMUST00000084203 4136 ntAPPRIS P3 TSL 5 BASIC15.03■□□□□ -0
Trav12d-3A0A075B6A4 Bhlhe22-201ENSMUST00000026120 3344 ntAPPRIS P1 BASIC15.03■□□□□ -0
Trav12d-3A0A075B6A4 Adssl1-202ENSMUST00000180015 1819 ntTSL 1 (best) BASIC15.03■□□□□ -0
Trav12d-3A0A075B6A4 Otx2-204ENSMUST00000122009 1737 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Trav12d-3A0A075B6A4 Tbkbp1-203ENSMUST00000107614 2391 ntAPPRIS ALT2 TSL 5 BASIC15.03■□□□□ -0
Trav12d-3A0A075B6A4 Fbxw5-201ENSMUST00000015239 2388 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Trav12d-3A0A075B6A4 Zfp746-203ENSMUST00000203609 3648 ntAPPRIS ALT2 TSL 5 BASIC15.03■□□□□ -0
Trav12d-3A0A075B6A4 4930452B06Rik-201ENSMUST00000102996 2681 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Trav12d-3A0A075B6A4 Ttc6-201ENSMUST00000101398 1484 ntTSL 1 (best) BASIC15.02■□□□□ -0
Trav12d-3A0A075B6A4 Clcn4-206ENSMUST00000210594 2539 ntAPPRIS ALT2 TSL 5 BASIC15.02■□□□□ -0
Trav12d-3A0A075B6A4 Stmn4-204ENSMUST00000121955 1361 ntTSL 5 BASIC15.02■□□□□ -0
Trav12d-3A0A075B6A4 Bmpr1b-202ENSMUST00000098568 1910 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Trav12d-3A0A075B6A4 Tsen54-202ENSMUST00000106481 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
Trav12d-3A0A075B6A4 Gm43909-201ENSMUST00000203443 1876 ntBASIC15.02■□□□□ -0
Trav12d-3A0A075B6A4 1190005I06Rik-201ENSMUST00000123927 844 ntAPPRIS P2 TSL 1 (best) BASIC15.02■□□□□ -0
Trav12d-3A0A075B6A4 Gm12523-201ENSMUST00000148844 599 ntTSL 5 BASIC15.02■□□□□ -0
Trav12d-3A0A075B6A4 Rab42-201ENSMUST00000040411 761 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Trav12d-3A0A075B6A4 Hacd1-202ENSMUST00000091429 871 ntTSL 1 (best) BASIC15.02■□□□□ -0
Trav12d-3A0A075B6A4 Mtus2-205ENSMUST00000110515 1792 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Trav12d-3A0A075B6A4 Baz1a-201ENSMUST00000038926 6188 ntAPPRIS ALT2 TSL 5 BASIC15.02□□□□□ -0.01
Trav12d-3A0A075B6A4 Prmt3-201ENSMUST00000032715 2507 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Trav12d-3A0A075B6A4 Mtfmt-201ENSMUST00000074792 2042 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Trav12d-3A0A075B6A4 Papola-212ENSMUST00000168186 2436 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
Trav12d-3A0A075B6A4 Fgf3-201ENSMUST00000105898 2299 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trav12d-3A0A075B6A4 Dnpep-204ENSMUST00000185797 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trav12d-3A0A075B6A4 Slc9a2-203ENSMUST00000192345 2507 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Trav12d-3A0A075B6A4 Pgf-204ENSMUST00000223220 2080 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trav12d-3A0A075B6A4 Nkd1-201ENSMUST00000034086 3035 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trav12d-3A0A075B6A4 Sec24b-201ENSMUST00000001079 5128 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trav12d-3A0A075B6A4 Ache-209ENSMUST00000196208 1911 ntTSL 5 BASIC15.01□□□□□ -0.01
Trav12d-3A0A075B6A4 Aen-202ENSMUST00000107423 2230 ntAPPRIS P3 TSL 5 BASIC15.01□□□□□ -0.01
Trav12d-3A0A075B6A4 Ddx41-201ENSMUST00000021956 2205 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trav12d-3A0A075B6A4 Cnr1-201ENSMUST00000057188 5807 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trav12d-3A0A075B6A4 Wipi1-202ENSMUST00000103060 2050 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trav12d-3A0A075B6A4 Adam22-205ENSMUST00000115385 2318 ntTSL 2 BASIC15□□□□□ -0.01
Trav12d-3A0A075B6A4 Tfeb-203ENSMUST00000113284 1974 ntTSL 5 BASIC15□□□□□ -0.01
Trav12d-3A0A075B6A4 Fbxl5-201ENSMUST00000047857 2858 ntAPPRIS P2 TSL 1 (best) BASIC15□□□□□ -0.01
Trav12d-3A0A075B6A4 Slc35a3-201ENSMUST00000029569 5725 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Trav12d-3A0A075B6A4 Tmem55b-205ENSMUST00000160835 2755 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
Trav12d-3A0A075B6A4 Mfsd14a-201ENSMUST00000029570 2782 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Trav12d-3A0A075B6A4 Kctd8-202ENSMUST00000087231 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
Trav12d-3A0A075B6A4 Nipa2-202ENSMUST00000117812 3039 ntAPPRIS P1 TSL 2 BASIC15□□□□□ -0.01
Trav12d-3A0A075B6A4 Cyp2r1-202ENSMUST00000119712 917 ntTSL 5 BASIC15□□□□□ -0.01
Trav12d-3A0A075B6A4 March11-201ENSMUST00000126304 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
Trav12d-3A0A075B6A4 Gm26917-201ENSMUST00000182520 869 ntTSL 5 BASIC15□□□□□ -0.01
Trav12d-3A0A075B6A4 Nrtn-201ENSMUST00000044752 1023 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Trav12d-3A0A075B6A4 Mtor-201ENSMUST00000057580 1003 ntTSL 1 (best) BASIC15□□□□□ -0.01
Trav12d-3A0A075B6A4 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC15□□□□□ -0.01
Trav12d-3A0A075B6A4 Fgfr3-202ENSMUST00000087820 2630 ntAPPRIS ALT2 TSL 5 BASIC15□□□□□ -0.01
Trav12d-3A0A075B6A4 A530010L16Rik-201ENSMUST00000212007 2336 ntTSL 1 (best) BASIC15□□□□□ -0.01
Trav12d-3A0A075B6A4 Zfp821-206ENSMUST00000212964 2033 ntTSL 1 (best) BASIC15□□□□□ -0.01
Trav12d-3A0A075B6A4 Maml1-201ENSMUST00000059458 5528 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Trav12d-3A0A075B6A4 Dus1l-203ENSMUST00000106135 1863 ntAPPRIS ALT2 TSL 5 BASIC14.99□□□□□ -0.01
Trav12d-3A0A075B6A4 D130058E05Rik-201ENSMUST00000173856 1372 ntTSL 2 BASIC14.99□□□□□ -0.01
Trav12d-3A0A075B6A4 Gm5540-201ENSMUST00000131852 1848 ntBASIC14.99□□□□□ -0.01
Trav12d-3A0A075B6A4 Lyar-201ENSMUST00000087514 1563 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Trav12d-3A0A075B6A4 Chtop-202ENSMUST00000049937 2012 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Trav12d-3A0A075B6A4 Mzt1-201ENSMUST00000042662 2240 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Trav12d-3A0A075B6A4 Mir3960-201ENSMUST00000198213 73 ntBASIC14.99□□□□□ -0.01
Trav12d-3A0A075B6A4 Smarcad1-211ENSMUST00000204696 734 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Trav12d-3A0A075B6A4 2810459M11Rik-201ENSMUST00000027429 1225 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Trav12d-3A0A075B6A4 Nsun2-202ENSMUST00000109699 2834 ntAPPRIS P2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Trav12d-3A0A075B6A4 Ddx39b-203ENSMUST00000173731 2848 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Trav12d-3A0A075B6A4 Mtmr14-201ENSMUST00000113146 2676 ntAPPRIS P2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Trav12d-3A0A075B6A4 Fance-201ENSMUST00000088007 1581 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
Trav12d-3A0A075B6A4 Mafg-201ENSMUST00000058162 4923 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trav12d-3A0A075B6A4 Dlg1-202ENSMUST00000064477 4663 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trav12d-3A0A075B6A4 Tmem230-206ENSMUST00000180286 1531 ntAPPRIS P1 TSL 2 BASIC14.98□□□□□ -0.01
Trav12d-3A0A075B6A4 Palm-202ENSMUST00000105379 2519 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Trav12d-3A0A075B6A4 Nectin1-201ENSMUST00000034510 5653 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trav12d-3A0A075B6A4 Gm31266-201ENSMUST00000192060 656 ntTSL 5 BASIC14.98□□□□□ -0.01
Trav12d-3A0A075B6A4 Gm7628-201ENSMUST00000134690 2010 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Trav12d-3A0A075B6A4 Foxj2-201ENSMUST00000003238 5283 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trav12d-3A0A075B6A4 Auh-204ENSMUST00000120535 1647 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Trav12d-3A0A075B6A4 Magi2-203ENSMUST00000115267 4478 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Trav12d-3A0A075B6A4 Rin3-202ENSMUST00000101114 2394 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Trav12d-3A0A075B6A4 Adat3-204ENSMUST00000038411 1411 ntAPPRIS P1 TSL 2 BASIC14.98□□□□□ -0.01
Trav12d-3A0A075B6A4 Vps26a-201ENSMUST00000092473 2712 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Trav12d-3A0A075B6A4 Rbfa-201ENSMUST00000025462 1377 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trav12d-3A0A075B6A4 Hdgfl3-202ENSMUST00000107305 5887 ntAPPRIS P2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trav12d-3A0A075B6A4 Bag5-202ENSMUST00000160576 1852 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trav12d-3A0A075B6A4 Slc17a7-202ENSMUST00000209634 1860 ntTSL 5 BASIC14.97□□□□□ -0.01
Trav12d-3A0A075B6A4 Cdk2ap1-201ENSMUST00000031341 1315 ntAPPRIS P2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trav12d-3A0A075B6A4 Nfe2-201ENSMUST00000075192 1697 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trav12d-3A0A075B6A4 Gm26884-201ENSMUST00000181207 3074 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Trav12d-3A0A075B6A4 U2af2-201ENSMUST00000005041 2183 ntAPPRIS ALT1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trav12d-3A0A075B6A4 Psme3-201ENSMUST00000019470 2664 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trav12d-3A0A075B6A4 Ncor1-203ENSMUST00000069456 3171 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Retrieved 100 of 76,532 protein–RNA pairs in 38.3 ms