Protein–RNA interactions for Protein: A0A075B656

Trav18, T cell receptor alpha variable 18 (Fragment), mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav18A0A075B656 Gm18190-203ENSMUST00000209944 389 ntTSL 2 BASIC16.48■□□□□ 0.23
Trav18A0A075B656 Tedc1-201ENSMUST00000049271 2441 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Trav18A0A075B656 Tmem238-201ENSMUST00000168578 1375 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Trav18A0A075B656 March2-203ENSMUST00000172767 1381 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Trav18A0A075B656 Gdf7-202ENSMUST00000220073 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Trav18A0A075B656 Ttc9b-201ENSMUST00000008088 2052 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Trav18A0A075B656 Asph-217ENSMUST00000146441 2576 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Trav18A0A075B656 Kansl1-204ENSMUST00000106972 5427 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
Trav18A0A075B656 Pink1-201ENSMUST00000030536 2375 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Trav18A0A075B656 Ssbp1-205ENSMUST00000121360 1188 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Trav18A0A075B656 Clta-206ENSMUST00000170241 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Trav18A0A075B656 Bag5-201ENSMUST00000054636 2139 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Trav18A0A075B656 Gm10232-201ENSMUST00000089221 720 ntBASIC16.47■□□□□ 0.23
Trav18A0A075B656 Tmem41a-201ENSMUST00000023562 1359 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Trav18A0A075B656 Kctd20-204ENSMUST00000122163 2423 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
Trav18A0A075B656 Uba5-201ENSMUST00000035166 2404 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Trav18A0A075B656 Trp73-204ENSMUST00000105644 5042 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
Trav18A0A075B656 Agfg1-202ENSMUST00000113444 3142 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Trav18A0A075B656 D11Wsu47e-201ENSMUST00000042227 2196 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Trav18A0A075B656 Klrg2-201ENSMUST00000096030 2276 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Trav18A0A075B656 Golph3-202ENSMUST00000226517 2359 ntBASIC16.46■□□□□ 0.23
Trav18A0A075B656 Gabra5-201ENSMUST00000068456 2671 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Trav18A0A075B656 Sae1-201ENSMUST00000094815 1875 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Trav18A0A075B656 Rab5c-201ENSMUST00000019317 1967 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Trav18A0A075B656 Cited1-202ENSMUST00000101336 1090 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Trav18A0A075B656 Akt1s1-204ENSMUST00000107885 1812 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Trav18A0A075B656 Zbtb7a-203ENSMUST00000119606 1841 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Trav18A0A075B656 Vwc2-201ENSMUST00000056344 1350 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Trav18A0A075B656 Spint1-203ENSMUST00000110817 2323 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Trav18A0A075B656 Cln5-201ENSMUST00000022721 2445 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Trav18A0A075B656 Lpcat3-201ENSMUST00000004381 2281 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Trav18A0A075B656 Sirt1-201ENSMUST00000020257 3905 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
Trav18A0A075B656 Mtfr1l-201ENSMUST00000102550 2025 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Trav18A0A075B656 Gm14207-203ENSMUST00000156538 988 ntTSL 2 BASIC16.45■□□□□ 0.22
Trav18A0A075B656 Gm9748-202ENSMUST00000194881 783 ntTSL 2 BASIC16.45■□□□□ 0.22
Trav18A0A075B656 A730035I17Rik-205ENSMUST00000205851 684 ntBASIC16.45■□□□□ 0.22
Trav18A0A075B656 Ddrgk1-201ENSMUST00000089559 1238 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Trav18A0A075B656 Hras-202ENSMUST00000097957 1199 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
Trav18A0A075B656 2210011C24Rik-204ENSMUST00000190457 1351 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Trav18A0A075B656 Tmem132b-201ENSMUST00000031446 7995 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
Trav18A0A075B656 Tmem79-202ENSMUST00000107552 2063 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
Trav18A0A075B656 Lmtk3-201ENSMUST00000072580 4807 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Trav18A0A075B656 Tcf7l1-201ENSMUST00000069536 3042 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
Trav18A0A075B656 Supv3l1-201ENSMUST00000020273 2604 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Trav18A0A075B656 Hnrnpf-202ENSMUST00000163168 2401 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Trav18A0A075B656 Cacnb1-203ENSMUST00000103144 2236 ntTSL 5 BASIC16.45■□□□□ 0.22
Trav18A0A075B656 Fpgs-201ENSMUST00000028148 2273 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Trav18A0A075B656 Pus1-203ENSMUST00000086643 1868 ntAPPRIS P4 TSL 1 (best) BASIC16.44■□□□□ 0.22
Trav18A0A075B656 Adamts18-201ENSMUST00000093113 5642 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Trav18A0A075B656 Gm572-201ENSMUST00000105698 1385 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
Trav18A0A075B656 Catsper2-201ENSMUST00000038073 2247 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Trav18A0A075B656 Dusp26-201ENSMUST00000036631 1938 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Trav18A0A075B656 Pacsin2-201ENSMUST00000056177 2795 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Trav18A0A075B656 Gja3-201ENSMUST00000061614 2766 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Trav18A0A075B656 4930524B15Rik-201ENSMUST00000102829 2000 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Trav18A0A075B656 Becn1-217ENSMUST00000172233 1493 ntTSL 5 BASIC16.43■□□□□ 0.22
Trav18A0A075B656 Mark2-202ENSMUST00000032557 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Trav18A0A075B656 Siah2-201ENSMUST00000070368 2511 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Trav18A0A075B656 Chkb-201ENSMUST00000023289 1707 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Trav18A0A075B656 Eif5a-213ENSMUST00000164359 1281 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
Trav18A0A075B656 Cradd-205ENSMUST00000220279 1613 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Trav18A0A075B656 Pias2-202ENSMUST00000114777 4968 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Trav18A0A075B656 Mark2-207ENSMUST00000165286 2975 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
Trav18A0A075B656 Vstm2b-201ENSMUST00000044705 2627 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
Trav18A0A075B656 Stx2-202ENSMUST00000100680 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Trav18A0A075B656 Maz-203ENSMUST00000205568 2650 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
Trav18A0A075B656 4930507D05Rik-201ENSMUST00000181110 1834 ntAPPRIS P1 BASIC16.42■□□□□ 0.22
Trav18A0A075B656 Tpst2-201ENSMUST00000031287 1835 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Trav18A0A075B656 Cryzl1-203ENSMUST00000117644 1727 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Trav18A0A075B656 Fam105a-201ENSMUST00000100739 2867 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Trav18A0A075B656 Rem2-202ENSMUST00000164766 1884 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Trav18A0A075B656 Hrh3-205ENSMUST00000165762 1368 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
Trav18A0A075B656 Gm2464-202ENSMUST00000194841 877 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Trav18A0A075B656 Rabac1-201ENSMUST00000076961 899 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Trav18A0A075B656 Fgfr2-217ENSMUST00000124096 2425 ntTSL 5 BASIC16.42■□□□□ 0.22
Trav18A0A075B656 Gm15441-202ENSMUST00000107095 1653 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Trav18A0A075B656 AA543186-201ENSMUST00000180841 1696 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Trav18A0A075B656 Uqcrc1-201ENSMUST00000026743 1653 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Trav18A0A075B656 Fgfrl1-202ENSMUST00000112560 2318 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Trav18A0A075B656 Cyp4f15-201ENSMUST00000008801 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Trav18A0A075B656 Cers1-203ENSMUST00000165819 2728 ntAPPRIS P4 TSL 1 (best) BASIC16.42■□□□□ 0.22
Trav18A0A075B656 Mknk2-205ENSMUST00000200082 3439 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Trav18A0A075B656 Art5-204ENSMUST00000106937 1713 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Trav18A0A075B656 Aplp1-201ENSMUST00000006828 2343 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Trav18A0A075B656 Sema6d-202ENSMUST00000076335 6276 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Trav18A0A075B656 Kcnip2-201ENSMUST00000026247 1203 ntAPPRIS ALT1 TSL 5 BASIC16.41■□□□□ 0.22
Trav18A0A075B656 Ttc36-201ENSMUST00000044694 888 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Trav18A0A075B656 Rpl34-201ENSMUST00000062601 624 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Trav18A0A075B656 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC16.41■□□□□ 0.22
Trav18A0A075B656 Kirrel3-202ENSMUST00000115148 2851 ntAPPRIS P3 TSL 5 BASIC16.41■□□□□ 0.22
Trav18A0A075B656 1700030C10Rik-203ENSMUST00000189625 1735 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Trav18A0A075B656 Slc35b2-201ENSMUST00000041353 2326 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Trav18A0A075B656 Donson-203ENSMUST00000117159 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Trav18A0A075B656 Mtfmt-201ENSMUST00000074792 2042 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Trav18A0A075B656 Dus1l-203ENSMUST00000106135 1863 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
Trav18A0A075B656 Pbx1-202ENSMUST00000072863 1709 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Trav18A0A075B656 Otud1-201ENSMUST00000052168 2832 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
Trav18A0A075B656 AC102554.1-201ENSMUST00000216236 537 ntTSL 5 BASIC16.4■□□□□ 0.22
Trav18A0A075B656 Mpv17l2-201ENSMUST00000038626 980 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Trav18A0A075B656 Tlx2-201ENSMUST00000089641 1236 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Retrieved 100 of 76,532 protein–RNA pairs in 103.9 ms