Protein–RNA interactions for Protein: A0A075B622

Trav10n, T cell receptor alpha variable 10N (Fragment), mousemouse

Predictions only

Length 114 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav10nA0A075B622 Gramd1a-202ENSMUST00000085636 2543 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.45
Trav10nA0A075B622 Ubtd1-201ENSMUST00000026170 1527 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Trav10nA0A075B622 Cdan1-202ENSMUST00000110701 6384 ntAPPRIS P2 TSL 5 BASIC17.83■□□□□ 0.44
Trav10nA0A075B622 Gm14205-201ENSMUST00000138427 739 ntTSL 3 BASIC17.83■□□□□ 0.44
Trav10nA0A075B622 Dleu2-211ENSMUST00000183066 788 ntTSL 3 BASIC17.83■□□□□ 0.44
Trav10nA0A075B622 Rnaset2b-201ENSMUST00000089119 1013 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Trav10nA0A075B622 Mmp24-201ENSMUST00000029141 4306 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Trav10nA0A075B622 Ppp2r5a-201ENSMUST00000067976 3088 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Trav10nA0A075B622 Cryzl1-203ENSMUST00000117644 1727 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Trav10nA0A075B622 Nectin1-201ENSMUST00000034510 5653 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Trav10nA0A075B622 Cotl1-202ENSMUST00000168698 1520 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Trav10nA0A075B622 Dtnb-210ENSMUST00000173199 2820 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
Trav10nA0A075B622 Srsf10-203ENSMUST00000102544 2225 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Trav10nA0A075B622 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC17.82■□□□□ 0.44
Trav10nA0A075B622 Clta-205ENSMUST00000107851 1135 ntAPPRIS P4 TSL 2 BASIC17.82■□□□□ 0.44
Trav10nA0A075B622 Barhl1-203ENSMUST00000113849 2102 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Trav10nA0A075B622 E130307A14Rik-202ENSMUST00000133302 438 ntTSL 5 BASIC17.82■□□□□ 0.44
Trav10nA0A075B622 2900079G21Rik-201ENSMUST00000139552 1139 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Trav10nA0A075B622 Gbx2-201ENSMUST00000036954 2135 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Trav10nA0A075B622 Atp6v1f-201ENSMUST00000004396 703 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Trav10nA0A075B622 C1qc-201ENSMUST00000046332 1203 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Trav10nA0A075B622 Sema6d-202ENSMUST00000076335 6276 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Trav10nA0A075B622 Kansl1-204ENSMUST00000106972 5427 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
Trav10nA0A075B622 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
Trav10nA0A075B622 Selenoo-201ENSMUST00000082439 2383 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Trav10nA0A075B622 Zbtb4-203ENSMUST00000108640 4067 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Trav10nA0A075B622 Ccne1-201ENSMUST00000108023 2000 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Trav10nA0A075B622 Gpatch3-201ENSMUST00000030662 2004 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Trav10nA0A075B622 Rhod-201ENSMUST00000048197 1344 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Trav10nA0A075B622 Srm-201ENSMUST00000006611 1338 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Trav10nA0A075B622 Pde7a-202ENSMUST00000099195 6298 ntAPPRIS ALT1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Trav10nA0A075B622 Tysnd1-201ENSMUST00000020284 2286 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Trav10nA0A075B622 Cuta-201ENSMUST00000025027 639 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
Trav10nA0A075B622 Ptms-201ENSMUST00000032216 1149 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Trav10nA0A075B622 Zbtb7a-203ENSMUST00000119606 1841 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Trav10nA0A075B622 Tead1-204ENSMUST00000106638 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Trav10nA0A075B622 Slc25a3-203ENSMUST00000164505 1483 ntAPPRIS P2 TSL 5 BASIC17.81■□□□□ 0.44
Trav10nA0A075B622 Ncoa7-206ENSMUST00000215725 1445 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Trav10nA0A075B622 Ccng2-201ENSMUST00000031331 2810 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Trav10nA0A075B622 Etv4-202ENSMUST00000107176 2377 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Trav10nA0A075B622 Etv4-201ENSMUST00000017868 2395 ntAPPRIS ALT1 TSL 5 BASIC17.8■□□□□ 0.44
Trav10nA0A075B622 Hfe2-201ENSMUST00000049208 2028 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Trav10nA0A075B622 Art5-204ENSMUST00000106937 1713 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Trav10nA0A075B622 AC152827.1-201ENSMUST00000221143 2189 ntBASIC17.8■□□□□ 0.44
Trav10nA0A075B622 Sc5d-202ENSMUST00000169609 1677 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Trav10nA0A075B622 Ankrd9-207ENSMUST00000148765 1431 ntAPPRIS P2 TSL 2 BASIC17.8■□□□□ 0.44
Trav10nA0A075B622 Fam207a-201ENSMUST00000045454 2394 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Trav10nA0A075B622 Slc35f3-201ENSMUST00000108759 2309 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Trav10nA0A075B622 Mcmbp-202ENSMUST00000119081 2347 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Trav10nA0A075B622 A930012O16Rik-202ENSMUST00000156418 1541 ntTSL 2 BASIC17.79■□□□□ 0.44
Trav10nA0A075B622 Stau2-217ENSMUST00000162751 3030 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Trav10nA0A075B622 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC17.79■□□□□ 0.44
Trav10nA0A075B622 Gm37035-201ENSMUST00000194809 2148 ntBASIC17.79■□□□□ 0.44
Trav10nA0A075B622 8430432A02Rik-201ENSMUST00000039080 1248 ntBASIC17.79■□□□□ 0.44
Trav10nA0A075B622 Unc5b-201ENSMUST00000077925 5869 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Trav10nA0A075B622 Nrxn2-205ENSMUST00000113462 6667 ntAPPRIS P4 TSL 1 (best) BASIC17.79■□□□□ 0.44
Trav10nA0A075B622 Gab1-201ENSMUST00000034150 4870 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Trav10nA0A075B622 Ercc6l2-208ENSMUST00000144763 1820 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Trav10nA0A075B622 Nab2-201ENSMUST00000026469 2582 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Trav10nA0A075B622 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Trav10nA0A075B622 Exosc4-201ENSMUST00000059045 1796 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Trav10nA0A075B622 Gng12-202ENSMUST00000114222 1354 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Trav10nA0A075B622 Zbtb7a-202ENSMUST00000117956 1863 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Trav10nA0A075B622 Mum1-201ENSMUST00000020365 2640 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Trav10nA0A075B622 6330403K07Rik-201ENSMUST00000156068 1494 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Trav10nA0A075B622 Casd1-204ENSMUST00000181734 1063 ntTSL 5 BASIC17.78■□□□□ 0.44
Trav10nA0A075B622 Ppp2r2c-203ENSMUST00000201156 461 ntTSL 5 BASIC17.78■□□□□ 0.44
Trav10nA0A075B622 Lgr4-201ENSMUST00000046548 5060 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
Trav10nA0A075B622 Slc22a23-201ENSMUST00000040336 6251 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Trav10nA0A075B622 Art1-201ENSMUST00000033300 1425 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Trav10nA0A075B622 Inpp5a-203ENSMUST00000106098 2826 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Trav10nA0A075B622 Tex264-202ENSMUST00000163441 1896 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Trav10nA0A075B622 Cav2-201ENSMUST00000000058 2733 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Trav10nA0A075B622 Prmt1-202ENSMUST00000107843 1508 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Trav10nA0A075B622 Dedd2-201ENSMUST00000058702 1828 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Trav10nA0A075B622 Naxd-202ENSMUST00000177955 1307 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Trav10nA0A075B622 Tmprss5-205ENSMUST00000170246 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
Trav10nA0A075B622 Ubald2-201ENSMUST00000057676 1482 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Trav10nA0A075B622 Tfap2e-201ENSMUST00000048194 2085 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Trav10nA0A075B622 Smox-205ENSMUST00000110182 985 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Trav10nA0A075B622 Gm10645-201ENSMUST00000098605 1090 ntAPPRIS P1 BASIC17.77■□□□□ 0.44
Trav10nA0A075B622 Ccdc149-202ENSMUST00000198008 2470 ntTSL 5 BASIC17.77■□□□□ 0.43
Trav10nA0A075B622 A030001D20Rik-201ENSMUST00000211533 1542 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
Trav10nA0A075B622 Emc10-201ENSMUST00000118515 1662 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.43
Trav10nA0A075B622 Letm2-201ENSMUST00000079160 2126 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Trav10nA0A075B622 Bmpr1a-201ENSMUST00000049005 5956 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Trav10nA0A075B622 Zbtb10-201ENSMUST00000155203 7414 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
Trav10nA0A075B622 Ankrd33b-202ENSMUST00000076942 1641 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Trav10nA0A075B622 Cog1-202ENSMUST00000063776 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Trav10nA0A075B622 3830408C21Rik-205ENSMUST00000225426 1898 ntBASIC17.76■□□□□ 0.43
Trav10nA0A075B622 Map2k2-202ENSMUST00000105331 1556 ntAPPRIS ALT1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Trav10nA0A075B622 Msantd3-203ENSMUST00000107704 1597 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Trav10nA0A075B622 Mrpl38-201ENSMUST00000106439 1411 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Trav10nA0A075B622 Nphp1-202ENSMUST00000110357 2296 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Trav10nA0A075B622 Tpm1-206ENSMUST00000113686 998 ntTSL 5 BASIC17.76■□□□□ 0.43
Trav10nA0A075B622 A930032L01Rik-201ENSMUST00000195845 957 ntBASIC17.76■□□□□ 0.43
Trav10nA0A075B622 Endod1-203ENSMUST00000214236 419 ntAPPRIS ALT2 TSL 3 BASIC17.76■□□□□ 0.43
Trav10nA0A075B622 Tsen54-201ENSMUST00000021134 1979 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Trav10nA0A075B622 AA543186-201ENSMUST00000180841 1696 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Trav10nA0A075B622 Socs2-201ENSMUST00000020215 2222 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Retrieved 100 of 76,532 protein–RNA pairs in 15.4 ms