Protein–RNA interactions for Protein: A0A075B620

Trav7n-4, T cell receptor alpha variable 7N-4 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav7n-4A0A075B620 March11-201ENSMUST00000126304 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trav7n-4A0A075B620 Clint1-202ENSMUST00000109261 3365 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
Trav7n-4A0A075B620 Gtf2a2-203ENSMUST00000119413 1034 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trav7n-4A0A075B620 Dnaja4-201ENSMUST00000070070 3003 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trav7n-4A0A075B620 Larp1-203ENSMUST00000178636 6617 ntAPPRIS P2 TSL 5 BASIC15.22■□□□□ 0.03
Trav7n-4A0A075B620 Gxylt1-201ENSMUST00000049484 6611 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trav7n-4A0A075B620 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC15.21■□□□□ 0.03
Trav7n-4A0A075B620 Adpgk-201ENSMUST00000026266 2464 ntAPPRIS ALT1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Trav7n-4A0A075B620 Hoxb3os-201ENSMUST00000131275 2315 ntTSL 3 BASIC15.21■□□□□ 0.03
Trav7n-4A0A075B620 Def6-201ENSMUST00000002327 2277 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Trav7n-4A0A075B620 Srsf4-202ENSMUST00000053819 2257 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Trav7n-4A0A075B620 Jph1-201ENSMUST00000038382 4809 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Trav7n-4A0A075B620 Wbp1-208ENSMUST00000151393 837 ntTSL 3 BASIC15.21■□□□□ 0.03
Trav7n-4A0A075B620 4930542C12Rik-201ENSMUST00000171096 1203 ntBASIC15.21■□□□□ 0.03
Trav7n-4A0A075B620 A130051J06Rik-201ENSMUST00000180649 2618 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Trav7n-4A0A075B620 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
Trav7n-4A0A075B620 Kti12-201ENSMUST00000102738 1629 ntAPPRIS P1 BASIC15.21■□□□□ 0.02
Trav7n-4A0A075B620 Lefty1-201ENSMUST00000037361 1620 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Trav7n-4A0A075B620 Uck1-201ENSMUST00000002625 2005 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Trav7n-4A0A075B620 Gpatch3-201ENSMUST00000030662 2004 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Trav7n-4A0A075B620 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trav7n-4A0A075B620 Tusc2-201ENSMUST00000010198 1665 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trav7n-4A0A075B620 Clpp-201ENSMUST00000002735 1207 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trav7n-4A0A075B620 Fzd2-201ENSMUST00000057893 3663 ntAPPRIS P1 BASIC15.2■□□□□ 0.02
Trav7n-4A0A075B620 Dscam-201ENSMUST00000056102 7498 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trav7n-4A0A075B620 Sept7-202ENSMUST00000165594 2516 ntAPPRIS P2 TSL 5 BASIC15.2■□□□□ 0.02
Trav7n-4A0A075B620 Baiap2l2-201ENSMUST00000165408 2100 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trav7n-4A0A075B620 Vmn1r17-205ENSMUST00000228342 2230 ntAPPRIS P2 BASIC15.2■□□□□ 0.02
Trav7n-4A0A075B620 Snx21-204ENSMUST00000172577 1825 ntTSL 2 BASIC15.2■□□□□ 0.02
Trav7n-4A0A075B620 Wnk2-205ENSMUST00000110097 6882 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
Trav7n-4A0A075B620 Wnk2-203ENSMUST00000091623 6897 ntAPPRIS P4 TSL 5 BASIC15.19■□□□□ 0.02
Trav7n-4A0A075B620 Gfi1-203ENSMUST00000159164 2648 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trav7n-4A0A075B620 Sstr1-201ENSMUST00000044299 2014 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trav7n-4A0A075B620 Tmem250-ps-201ENSMUST00000133808 2483 ntTSL 2 BASIC15.19■□□□□ 0.02
Trav7n-4A0A075B620 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trav7n-4A0A075B620 Chtop-204ENSMUST00000107342 2411 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Trav7n-4A0A075B620 Gm20458-201ENSMUST00000164863 1369 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
Trav7n-4A0A075B620 Slc35f4-202ENSMUST00000123534 2748 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Trav7n-4A0A075B620 Arhgap23-203ENSMUST00000121799 5816 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
Trav7n-4A0A075B620 Plppr3-201ENSMUST00000092325 2766 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trav7n-4A0A075B620 Alg9-201ENSMUST00000034561 2873 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trav7n-4A0A075B620 Nkx2-5-201ENSMUST00000015723 1525 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trav7n-4A0A075B620 Golph3-205ENSMUST00000228671 2842 ntBASIC15.18■□□□□ 0.02
Trav7n-4A0A075B620 Panx1-202ENSMUST00000164273 5732 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trav7n-4A0A075B620 Ache-209ENSMUST00000196208 1911 ntTSL 5 BASIC15.18■□□□□ 0.02
Trav7n-4A0A075B620 Pex11b-202ENSMUST00000118557 2424 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trav7n-4A0A075B620 Srcin1-201ENSMUST00000107590 5493 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
Trav7n-4A0A075B620 Fkbp9-201ENSMUST00000031795 3009 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trav7n-4A0A075B620 Hexa-201ENSMUST00000026262 1996 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trav7n-4A0A075B620 Sumf1-201ENSMUST00000032191 2593 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trav7n-4A0A075B620 Jag1-201ENSMUST00000028735 5612 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trav7n-4A0A075B620 Utp11-201ENSMUST00000030738 1603 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trav7n-4A0A075B620 Tmem44-204ENSMUST00000140402 2405 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trav7n-4A0A075B620 Wdsub1-201ENSMUST00000028368 2072 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trav7n-4A0A075B620 Cracr2b-201ENSMUST00000053670 1698 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trav7n-4A0A075B620 Eva1b-203ENSMUST00000106152 1364 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trav7n-4A0A075B620 AC150314.2-201ENSMUST00000214135 834 ntTSL 5 BASIC15.17■□□□□ 0.02
Trav7n-4A0A075B620 Zfp697-201ENSMUST00000056096 5166 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trav7n-4A0A075B620 Agtpbp1-222ENSMUST00000171606 3037 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Trav7n-4A0A075B620 Dhx15-201ENSMUST00000031061 3010 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trav7n-4A0A075B620 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trav7n-4A0A075B620 Cep78-201ENSMUST00000047704 2548 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trav7n-4A0A075B620 Rnf146-203ENSMUST00000160372 1948 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trav7n-4A0A075B620 Bdh1-201ENSMUST00000089759 1711 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trav7n-4A0A075B620 Lrch3-201ENSMUST00000023491 5536 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trav7n-4A0A075B620 Iars2-203ENSMUST00000110975 2801 ntTSL 5 BASIC15.16■□□□□ 0.02
Trav7n-4A0A075B620 Spsb4-201ENSMUST00000055433 2720 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trav7n-4A0A075B620 Tbxa2r-201ENSMUST00000105325 1765 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trav7n-4A0A075B620 Gm12524-201ENSMUST00000143109 1583 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Trav7n-4A0A075B620 Dip2c-203ENSMUST00000174552 8023 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trav7n-4A0A075B620 Zfp706-201ENSMUST00000078976 4417 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trav7n-4A0A075B620 Phf14-202ENSMUST00000115510 3353 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Trav7n-4A0A075B620 Pex7-203ENSMUST00000166511 1047 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Trav7n-4A0A075B620 Slc35a2-211ENSMUST00000208640 486 ntTSL 5 BASIC15.16■□□□□ 0.02
Trav7n-4A0A075B620 Hook2-203ENSMUST00000209764 2516 ntTSL 5 BASIC15.16■□□□□ 0.02
Trav7n-4A0A075B620 Fra10ac1-201ENSMUST00000067167 1402 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trav7n-4A0A075B620 Crhr1-201ENSMUST00000093925 2460 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trav7n-4A0A075B620 Zc3hav1l-201ENSMUST00000058524 6536 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trav7n-4A0A075B620 Fam105a-202ENSMUST00000226145 2950 ntAPPRIS P1 BASIC15.15■□□□□ 0.02
Trav7n-4A0A075B620 Sh2d4b-202ENSMUST00000096000 1597 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trav7n-4A0A075B620 1700095J03Rik-201ENSMUST00000143715 1808 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Trav7n-4A0A075B620 Hpdl-201ENSMUST00000055436 1804 ntAPPRIS P1 BASIC15.15■□□□□ 0.02
Trav7n-4A0A075B620 D17Wsu92e-201ENSMUST00000075076 1470 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Trav7n-4A0A075B620 Rnf8-201ENSMUST00000024817 2077 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trav7n-4A0A075B620 Egln1-201ENSMUST00000034469 3594 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trav7n-4A0A075B620 Kras-207ENSMUST00000203147 817 ntTSL 5 BASIC15.15■□□□□ 0.02
Trav7n-4A0A075B620 Ndufs3-201ENSMUST00000005647 1046 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trav7n-4A0A075B620 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Trav7n-4A0A075B620 Eml4-203ENSMUST00000112363 5238 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trav7n-4A0A075B620 Gprc5c-201ENSMUST00000021071 2200 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trav7n-4A0A075B620 Mcu-202ENSMUST00000020312 2872 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
Trav7n-4A0A075B620 Ntn5-203ENSMUST00000183120 1491 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Trav7n-4A0A075B620 Ehmt2-203ENSMUST00000097342 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trav7n-4A0A075B620 Dus1l-203ENSMUST00000106135 1863 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
Trav7n-4A0A075B620 Kcns3-201ENSMUST00000055673 2933 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trav7n-4A0A075B620 Gapvd1-201ENSMUST00000028224 5695 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trav7n-4A0A075B620 B630019K06Rik-201ENSMUST00000064196 2583 ntAPPRIS P1 BASIC15.14■□□□□ 0.01
Trav7n-4A0A075B620 4932443I19Rik-201ENSMUST00000166277 799 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trav7n-4A0A075B620 Pigv-202ENSMUST00000067902 990 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Trav7n-4A0A075B620 Plekhm2-202ENSMUST00000084203 4136 ntAPPRIS P3 TSL 5 BASIC15.14■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 33 ms