Protein–RNA interactions for Protein: A0A075B5Z7

Trav5-1, T cell receptor alpha variable 5-1 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav5-1A0A075B5Z7 Slc25a41-201ENSMUST00000058661 1225 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
Trav5-1A0A075B5Z7 Kif1bp-201ENSMUST00000065887 2472 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Trav5-1A0A075B5Z7 Rnaset2b-202ENSMUST00000179728 2448 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Trav5-1A0A075B5Z7 Gm12504-201ENSMUST00000120860 2231 ntBASIC17.33■□□□□ 0.36
Trav5-1A0A075B5Z7 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
Trav5-1A0A075B5Z7 Pi4kb-207ENSMUST00000167008 1962 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Trav5-1A0A075B5Z7 Nrarp-201ENSMUST00000104999 2582 ntAPPRIS P1 BASIC17.33■□□□□ 0.36
Trav5-1A0A075B5Z7 Pold2-201ENSMUST00000102922 1646 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Trav5-1A0A075B5Z7 Ubl4a-206ENSMUST00000155676 2442 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Trav5-1A0A075B5Z7 Lsm12-201ENSMUST00000021297 2256 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Trav5-1A0A075B5Z7 Ttc7b-201ENSMUST00000062957 3446 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Trav5-1A0A075B5Z7 Rsrc1-202ENSMUST00000065047 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Trav5-1A0A075B5Z7 Pet117-201ENSMUST00000183618 693 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
Trav5-1A0A075B5Z7 Gm8493-201ENSMUST00000196881 489 ntBASIC17.32■□□□□ 0.36
Trav5-1A0A075B5Z7 Wdr70-203ENSMUST00000227371 1130 ntBASIC17.32■□□□□ 0.36
Trav5-1A0A075B5Z7 Krtap5-5-201ENSMUST00000097942 1177 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
Trav5-1A0A075B5Z7 Prdm13-201ENSMUST00000076206 2993 ntAPPRIS ALT2 TSL 2 BASIC17.32■□□□□ 0.36
Trav5-1A0A075B5Z7 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Trav5-1A0A075B5Z7 Cdc20-201ENSMUST00000006565 1793 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Trav5-1A0A075B5Z7 Gm26796-201ENSMUST00000181092 2276 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Trav5-1A0A075B5Z7 Magi3-201ENSMUST00000064371 6640 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
Trav5-1A0A075B5Z7 Nectin1-201ENSMUST00000034510 5653 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Trav5-1A0A075B5Z7 Gpatch3-201ENSMUST00000030662 2004 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Trav5-1A0A075B5Z7 Gm27045-201ENSMUST00000182145 1402 ntBASIC17.31■□□□□ 0.36
Trav5-1A0A075B5Z7 Bag5-202ENSMUST00000160576 1852 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Trav5-1A0A075B5Z7 Klc3-204ENSMUST00000108459 1849 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Trav5-1A0A075B5Z7 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Trav5-1A0A075B5Z7 Cdkn2a-202ENSMUST00000107131 895 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Trav5-1A0A075B5Z7 Rtn4-210ENSMUST00000170731 1272 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Trav5-1A0A075B5Z7 Gm9922-201ENSMUST00000066461 435 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
Trav5-1A0A075B5Z7 Gm6139-201ENSMUST00000079261 882 ntBASIC17.31■□□□□ 0.36
Trav5-1A0A075B5Z7 Serbp1-207ENSMUST00000203436 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Trav5-1A0A075B5Z7 Mapk11-201ENSMUST00000088823 2440 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Trav5-1A0A075B5Z7 Nkpd1-203ENSMUST00000214205 2309 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
Trav5-1A0A075B5Z7 Rell2-212ENSMUST00000177058 1762 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
Trav5-1A0A075B5Z7 Bpifb4-202ENSMUST00000109757 2420 ntAPPRIS P2 TSL 5 BASIC17.3■□□□□ 0.36
Trav5-1A0A075B5Z7 C2cd4a-201ENSMUST00000054500 1395 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
Trav5-1A0A075B5Z7 Stmn4-201ENSMUST00000074523 1303 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Trav5-1A0A075B5Z7 Gm10209-201ENSMUST00000203397 1607 ntBASIC17.3■□□□□ 0.36
Trav5-1A0A075B5Z7 Habp4-201ENSMUST00000021929 2564 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Trav5-1A0A075B5Z7 Tarbp2-202ENSMUST00000100168 1278 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Trav5-1A0A075B5Z7 Prodh-206ENSMUST00000139861 677 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Trav5-1A0A075B5Z7 Tor2a-208ENSMUST00000177382 396 ntTSL 5 BASIC17.3■□□□□ 0.36
Trav5-1A0A075B5Z7 Spcs1-204ENSMUST00000226782 949 ntBASIC17.3■□□□□ 0.36
Trav5-1A0A075B5Z7 Whrn-202ENSMUST00000063672 2804 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Trav5-1A0A075B5Z7 Evi5l-209ENSMUST00000177053 1542 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
Trav5-1A0A075B5Z7 Atg3-201ENSMUST00000023343 2057 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Trav5-1A0A075B5Z7 Gclm-206ENSMUST00000178826 1002 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
Trav5-1A0A075B5Z7 Zdhhc5-201ENSMUST00000035840 4706 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Trav5-1A0A075B5Z7 Ache-209ENSMUST00000196208 1911 ntTSL 5 BASIC17.29■□□□□ 0.36
Trav5-1A0A075B5Z7 Bicdl2-201ENSMUST00000062967 1913 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Trav5-1A0A075B5Z7 Dedd-203ENSMUST00000111299 2322 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Trav5-1A0A075B5Z7 5730488B01Rik-201ENSMUST00000192889 2311 ntBASIC17.29■□□□□ 0.36
Trav5-1A0A075B5Z7 Dbnl-201ENSMUST00000020769 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Trav5-1A0A075B5Z7 Gnpnat1-201ENSMUST00000046191 2788 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Trav5-1A0A075B5Z7 Trim3-203ENSMUST00000106791 2466 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Trav5-1A0A075B5Z7 1700086O06Rik-202ENSMUST00000181871 1564 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Trav5-1A0A075B5Z7 Gng5-203ENSMUST00000119130 593 ntTSL 2 BASIC17.28■□□□□ 0.36
Trav5-1A0A075B5Z7 Pigx-210ENSMUST00000155966 963 ntAPPRIS ALT2 TSL 2 BASIC17.28■□□□□ 0.36
Trav5-1A0A075B5Z7 Gm15867-201ENSMUST00000159407 388 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Trav5-1A0A075B5Z7 Fbxl15-202ENSMUST00000177667 1243 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Trav5-1A0A075B5Z7 Gsc-201ENSMUST00000021513 1268 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Trav5-1A0A075B5Z7 Dcaf15-201ENSMUST00000041367 2312 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Trav5-1A0A075B5Z7 5031439G07Rik-201ENSMUST00000047144 6845 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Trav5-1A0A075B5Z7 Gmds-201ENSMUST00000041859 1713 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Trav5-1A0A075B5Z7 Sh3gl1-201ENSMUST00000003268 2072 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Trav5-1A0A075B5Z7 Has1-201ENSMUST00000003762 2090 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Trav5-1A0A075B5Z7 Actr5-201ENSMUST00000045644 2402 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Trav5-1A0A075B5Z7 Ppp1r12c-201ENSMUST00000013886 2983 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Trav5-1A0A075B5Z7 2810001G20Rik-202ENSMUST00000146333 959 ntTSL 3 BASIC17.27■□□□□ 0.36
Trav5-1A0A075B5Z7 Bag1-204ENSMUST00000215842 1068 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
Trav5-1A0A075B5Z7 D830025C05Rik-201ENSMUST00000059474 976 ntBASIC17.27■□□□□ 0.36
Trav5-1A0A075B5Z7 Wnt11-205ENSMUST00000167303 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Trav5-1A0A075B5Z7 Exosc4-201ENSMUST00000059045 1796 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Trav5-1A0A075B5Z7 Barhl1-203ENSMUST00000113849 2102 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Trav5-1A0A075B5Z7 Tmem164-206ENSMUST00000112896 5224 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Trav5-1A0A075B5Z7 Nabp2-202ENSMUST00000164199 1371 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Trav5-1A0A075B5Z7 Kazald1-201ENSMUST00000026234 1380 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Trav5-1A0A075B5Z7 Gnb2-201ENSMUST00000031726 1860 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Trav5-1A0A075B5Z7 Camk1-201ENSMUST00000032409 1496 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Trav5-1A0A075B5Z7 Slc35a3-201ENSMUST00000029569 5725 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Trav5-1A0A075B5Z7 Htra2-203ENSMUST00000113963 1629 ntTSL 5 BASIC17.26■□□□□ 0.35
Trav5-1A0A075B5Z7 Neo1-202ENSMUST00000214547 5414 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Trav5-1A0A075B5Z7 Srp19-202ENSMUST00000119329 613 ntTSL 2 BASIC17.26■□□□□ 0.35
Trav5-1A0A075B5Z7 1700016H13Rik-203ENSMUST00000120108 797 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
Trav5-1A0A075B5Z7 Gm13620-201ENSMUST00000131198 511 ntTSL 3 BASIC17.26■□□□□ 0.35
Trav5-1A0A075B5Z7 4930539J05Rik-202ENSMUST00000182865 511 ntTSL 2 BASIC17.26■□□□□ 0.35
Trav5-1A0A075B5Z7 Trnau1ap-201ENSMUST00000030730 1130 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Trav5-1A0A075B5Z7 Nr2c2ap-201ENSMUST00000095273 1161 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Trav5-1A0A075B5Z7 Syt6-205ENSMUST00000121834 1710 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Trav5-1A0A075B5Z7 Acot3-203ENSMUST00000223080 1545 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Trav5-1A0A075B5Z7 Mpzl1-202ENSMUST00000111435 2285 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Trav5-1A0A075B5Z7 Fam60a-202ENSMUST00000081956 2737 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Trav5-1A0A075B5Z7 Bcl11b-202ENSMUST00000109887 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Trav5-1A0A075B5Z7 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Trav5-1A0A075B5Z7 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Trav5-1A0A075B5Z7 Bfsp1-202ENSMUST00000099296 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Trav5-1A0A075B5Z7 Rfx8-202ENSMUST00000151913 2008 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Trav5-1A0A075B5Z7 Hey1-201ENSMUST00000042412 2423 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Trav5-1A0A075B5Z7 Thap8-201ENSMUST00000014072 1182 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 25.3 ms