Protein–RNA interactions for Protein: A0A075B5W3

Ighv1-53, Immunoglobulin heavy variable 1-53 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ighv1-53A0A075B5W3 Rbm38-201ENSMUST00000029014 1768 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Ighv1-53A0A075B5W3 Inpp5a-203ENSMUST00000106098 2826 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Ighv1-53A0A075B5W3 Hopx-203ENSMUST00000120827 1217 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Ighv1-53A0A075B5W3 Snrpa1-206ENSMUST00000153609 1248 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Ighv1-53A0A075B5W3 Pbx1-202ENSMUST00000072863 1709 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Ighv1-53A0A075B5W3 Vgf-202ENSMUST00000186451 2277 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
Ighv1-53A0A075B5W3 Shisa5-202ENSMUST00000112059 1910 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Ighv1-53A0A075B5W3 Sephs1-202ENSMUST00000115019 2933 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Ighv1-53A0A075B5W3 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
Ighv1-53A0A075B5W3 Slc36a4-202ENSMUST00000115588 1745 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Ighv1-53A0A075B5W3 Hpdl-201ENSMUST00000055436 1804 ntAPPRIS P1 BASIC15.18■□□□□ 0.02
Ighv1-53A0A075B5W3 Spock1-204ENSMUST00000186271 2005 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
Ighv1-53A0A075B5W3 Uba5-201ENSMUST00000035166 2404 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Ighv1-53A0A075B5W3 Cdkl3-204ENSMUST00000109077 2605 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
Ighv1-53A0A075B5W3 Ndel1-201ENSMUST00000018880 2382 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Ighv1-53A0A075B5W3 Qsox2-201ENSMUST00000036187 2559 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
Ighv1-53A0A075B5W3 Ltk-202ENSMUST00000082130 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Ighv1-53A0A075B5W3 Tsen34-202ENSMUST00000108627 1319 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Ighv1-53A0A075B5W3 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Ighv1-53A0A075B5W3 Dedd2-201ENSMUST00000058702 1828 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Ighv1-53A0A075B5W3 Gpatch3-201ENSMUST00000030662 2004 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Ighv1-53A0A075B5W3 Nrg3-203ENSMUST00000173780 2137 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
Ighv1-53A0A075B5W3 Bag5-201ENSMUST00000054636 2139 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Ighv1-53A0A075B5W3 Uap1-202ENSMUST00000111350 2311 ntAPPRIS ALT1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Ighv1-53A0A075B5W3 Desi2-204ENSMUST00000161075 2590 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Ighv1-53A0A075B5W3 Lpcat3-201ENSMUST00000004381 2281 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Ighv1-53A0A075B5W3 Laptm4a-201ENSMUST00000020909 1773 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Ighv1-53A0A075B5W3 Rem1-201ENSMUST00000000369 1663 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Ighv1-53A0A075B5W3 Stx18-202ENSMUST00000042146 1473 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Ighv1-53A0A075B5W3 Spc24-201ENSMUST00000098942 1366 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Ighv1-53A0A075B5W3 Tsc22d1-203ENSMUST00000101618 1043 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Ighv1-53A0A075B5W3 Fgfr2-217ENSMUST00000124096 2425 ntTSL 5 BASIC15.17■□□□□ 0.02
Ighv1-53A0A075B5W3 Tmem230-206ENSMUST00000180286 1531 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
Ighv1-53A0A075B5W3 Hyal2-203ENSMUST00000193747 1532 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Ighv1-53A0A075B5W3 Mgat5b-201ENSMUST00000103027 4258 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
Ighv1-53A0A075B5W3 Rbm7-201ENSMUST00000170000 1773 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Ighv1-53A0A075B5W3 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Ighv1-53A0A075B5W3 Catsper2-201ENSMUST00000038073 2247 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Ighv1-53A0A075B5W3 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Ighv1-53A0A075B5W3 Klhl15-205ENSMUST00000113916 2363 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Ighv1-53A0A075B5W3 Ccdc74a-201ENSMUST00000056962 1273 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
Ighv1-53A0A075B5W3 Nfkbib-202ENSMUST00000085851 1243 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Ighv1-53A0A075B5W3 Klrg2-201ENSMUST00000096030 2276 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Ighv1-53A0A075B5W3 Rhbdd3-201ENSMUST00000036320 1790 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Ighv1-53A0A075B5W3 Kifc3-201ENSMUST00000034240 3277 ntAPPRIS P4 TSL 1 (best) BASIC15.16■□□□□ 0.02
Ighv1-53A0A075B5W3 Kansl1-204ENSMUST00000106972 5427 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
Ighv1-53A0A075B5W3 Gm26660-201ENSMUST00000181582 2543 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Ighv1-53A0A075B5W3 Dhx33-204ENSMUST00000124464 1835 ntTSL 5 BASIC15.15■□□□□ 0.02
Ighv1-53A0A075B5W3 Magi3-201ENSMUST00000064371 6640 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
Ighv1-53A0A075B5W3 Paip1-201ENSMUST00000026520 2551 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
Ighv1-53A0A075B5W3 Gm27151-202ENSMUST00000185015 1145 ntTSL 5 BASIC15.15■□□□□ 0.02
Ighv1-53A0A075B5W3 Bub3-205ENSMUST00000208571 747 ntTSL 5 BASIC15.15■□□□□ 0.02
Ighv1-53A0A075B5W3 Bex1-201ENSMUST00000058125 866 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Ighv1-53A0A075B5W3 Oaz1-201ENSMUST00000060987 1071 ntAPPRIS ALT1 TSL 5 BASIC15.15■□□□□ 0.02
Ighv1-53A0A075B5W3 Fam91a1-201ENSMUST00000037270 5560 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Ighv1-53A0A075B5W3 Ttc9b-201ENSMUST00000008088 2052 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Ighv1-53A0A075B5W3 Wrap73-201ENSMUST00000030895 1598 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Ighv1-53A0A075B5W3 Ccdc149-202ENSMUST00000198008 2470 ntTSL 5 BASIC15.15■□□□□ 0.02
Ighv1-53A0A075B5W3 Rcor1-201ENSMUST00000084968 5684 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Ighv1-53A0A075B5W3 2310022B05Rik-201ENSMUST00000034464 3307 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Ighv1-53A0A075B5W3 Wnt11-205ENSMUST00000167303 1792 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Ighv1-53A0A075B5W3 Exosc4-201ENSMUST00000059045 1796 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Ighv1-53A0A075B5W3 Cuta-201ENSMUST00000025027 639 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
Ighv1-53A0A075B5W3 Plekhj1-201ENSMUST00000036805 1260 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Ighv1-53A0A075B5W3 Tcte2-201ENSMUST00000053376 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Ighv1-53A0A075B5W3 Tmcc1-202ENSMUST00000088896 5838 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Ighv1-53A0A075B5W3 Rhov-201ENSMUST00000037360 1703 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Ighv1-53A0A075B5W3 Mal2-201ENSMUST00000025356 2950 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Ighv1-53A0A075B5W3 Map3k21-201ENSMUST00000034316 5693 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Ighv1-53A0A075B5W3 Prmt1-202ENSMUST00000107843 1508 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Ighv1-53A0A075B5W3 Rab28-203ENSMUST00000201422 1697 ntTSL 5 BASIC15.13■□□□□ 0.01
Ighv1-53A0A075B5W3 Strn3-201ENSMUST00000013130 3046 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Ighv1-53A0A075B5W3 Bex4-201ENSMUST00000116527 837 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Ighv1-53A0A075B5W3 Phf2os1-201ENSMUST00000123212 498 ntTSL 3 BASIC15.13■□□□□ 0.01
Ighv1-53A0A075B5W3 Hrh3-203ENSMUST00000164442 1242 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
Ighv1-53A0A075B5W3 Hras-201ENSMUST00000026572 2828 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Ighv1-53A0A075B5W3 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC15.13■□□□□ 0.01
Ighv1-53A0A075B5W3 Qtrt1-201ENSMUST00000002902 1316 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Ighv1-53A0A075B5W3 Pbx1-206ENSMUST00000176790 1828 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Ighv1-53A0A075B5W3 Aplp1-201ENSMUST00000006828 2343 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Ighv1-53A0A075B5W3 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Ighv1-53A0A075B5W3 Cep78-201ENSMUST00000047704 2548 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Ighv1-53A0A075B5W3 Ung-202ENSMUST00000102584 2136 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
Ighv1-53A0A075B5W3 Gm13001-201ENSMUST00000154285 774 ntTSL 2 BASIC15.12■□□□□ 0.01
Ighv1-53A0A075B5W3 Rap1a-202ENSMUST00000197094 782 ntTSL 3 BASIC15.12■□□□□ 0.01
Ighv1-53A0A075B5W3 Fgfrl1-202ENSMUST00000112560 2318 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Ighv1-53A0A075B5W3 Zbtb4-203ENSMUST00000108640 4067 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Ighv1-53A0A075B5W3 Gnb2-201ENSMUST00000031726 1860 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Ighv1-53A0A075B5W3 A930012O16Rik-202ENSMUST00000156418 1541 ntTSL 2 BASIC15.12■□□□□ 0.01
Ighv1-53A0A075B5W3 Tusc3-203ENSMUST00000209440 1535 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Ighv1-53A0A075B5W3 Elf2-212ENSMUST00000194641 5919 ntAPPRIS P3 TSL 5 BASIC15.11■□□□□ 0.01
Ighv1-53A0A075B5W3 Rasef-203ENSMUST00000222414 2127 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
Ighv1-53A0A075B5W3 Siah1b-201ENSMUST00000037928 1783 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Ighv1-53A0A075B5W3 Gpr137c-207ENSMUST00000227086 4997 ntAPPRIS ALT2 BASIC15.11■□□□□ 0.01
Ighv1-53A0A075B5W3 Hpse-202ENSMUST00000112908 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Ighv1-53A0A075B5W3 Dmrta2-201ENSMUST00000061187 2922 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Ighv1-53A0A075B5W3 Espn-207ENSMUST00000105653 1411 ntTSL 5 BASIC15.11■□□□□ 0.01
Ighv1-53A0A075B5W3 Mtfmt-201ENSMUST00000074792 2042 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Ighv1-53A0A075B5W3 Stau2-217ENSMUST00000162751 3030 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Ighv1-53A0A075B5W3 Spns2-201ENSMUST00000045303 3241 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 16.9 ms