Protein–RNA interactions for Protein: Q9R100

Cdh17, Cadherin-17, mousemouse

Predictions only

Length 827 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh17Q9R100 Gm4900-201ENSMUST00000222046 1628 ntBASIC10.67□□□□□ -0.7
Cdh17Q9R100 Brat1-203ENSMUST00000110806 3854 ntAPPRIS ALT2 TSL 1 (best) BASIC10.67□□□□□ -0.7
Cdh17Q9R100 Pigh-203ENSMUST00000217998 2868 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Cdh17Q9R100 Itk-202ENSMUST00000101306 1185 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Cdh17Q9R100 Polr2i-203ENSMUST00000108193 488 ntTSL 3 BASIC10.67□□□□□ -0.7
Cdh17Q9R100 Gm15236-201ENSMUST00000117309 379 ntBASIC10.67□□□□□ -0.7
Cdh17Q9R100 Gm15573-201ENSMUST00000119487 540 ntBASIC10.67□□□□□ -0.7
Cdh17Q9R100 Gm12224-201ENSMUST00000124047 567 ntTSL 2 BASIC10.67□□□□□ -0.7
Cdh17Q9R100 Gm3233-201ENSMUST00000168997 693 ntAPPRIS P1 BASIC10.67□□□□□ -0.7
Cdh17Q9R100 Ly6e-203ENSMUST00000185861 838 ntAPPRIS P1 TSL 2 BASIC10.67□□□□□ -0.7
Cdh17Q9R100 Gm29199-201ENSMUST00000187766 775 ntBASIC10.67□□□□□ -0.7
Cdh17Q9R100 Gm29264-201ENSMUST00000191240 1264 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Cdh17Q9R100 Gm37852-201ENSMUST00000193027 350 ntBASIC10.67□□□□□ -0.7
Cdh17Q9R100 Gm37312-201ENSMUST00000195753 685 ntTSL 5 BASIC10.67□□□□□ -0.7
Cdh17Q9R100 Gm19046-201ENSMUST00000221263 1298 ntBASIC10.67□□□□□ -0.7
Cdh17Q9R100 Vmn1r212-201ENSMUST00000095960 1164 ntAPPRIS P1 BASIC10.67□□□□□ -0.7
Cdh17Q9R100 Ugt1a10-201ENSMUST00000113142 2244 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Cdh17Q9R100 Mmp19-203ENSMUST00000219404 2236 ntAPPRIS ALT2 TSL 1 (best) BASIC10.67□□□□□ -0.7
Cdh17Q9R100 Slc9a8-202ENSMUST00000073873 4429 ntAPPRIS ALT2 TSL 5 BASIC10.67□□□□□ -0.7
Cdh17Q9R100 Mpp1-202ENSMUST00000114091 1558 ntTSL 2 BASIC10.67□□□□□ -0.7
Cdh17Q9R100 Zfp869-201ENSMUST00000080987 1590 ntAPPRIS P1 TSL 5 BASIC10.67□□□□□ -0.7
Cdh17Q9R100 Sgk3-203ENSMUST00000168907 3779 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Cdh17Q9R100 Hmg20a-206ENSMUST00000217518 2468 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Cdh17Q9R100 Srrm4-202ENSMUST00000139425 2798 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Cdh17Q9R100 Zfp629-201ENSMUST00000058038 6120 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Cdh17Q9R100 Cd6-203ENSMUST00000080292 3032 ntAPPRIS P3 TSL 1 (best) BASIC10.67□□□□□ -0.7
Cdh17Q9R100 Pcdhb14-201ENSMUST00000052387 8695 ntAPPRIS P1 BASIC10.67□□□□□ -0.7
Cdh17Q9R100 Zfp654-202ENSMUST00000207826 6261 ntAPPRIS ALT2 TSL 5 BASIC10.67□□□□□ -0.7
Cdh17Q9R100 Cpvl-202ENSMUST00000203101 1488 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Cdh17Q9R100 Uimc1-204ENSMUST00000127195 2936 ntAPPRIS ALT2 TSL 5 BASIC10.67□□□□□ -0.7
Cdh17Q9R100 Zdhhc21-201ENSMUST00000030110 8763 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Cdh17Q9R100 Pard3-213ENSMUST00000160766 4949 ntAPPRIS ALT2 TSL 5 BASIC10.67□□□□□ -0.7
Cdh17Q9R100 Cstf1-201ENSMUST00000116375 3451 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Cdh17Q9R100 Bcl7a-202ENSMUST00000117971 4642 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Cdh17Q9R100 Ngfr-201ENSMUST00000000122 3446 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Cdh17Q9R100 Dclre1b-203ENSMUST00000106832 2299 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Cdh17Q9R100 Vwa7-202ENSMUST00000172499 3970 ntAPPRIS ALT2 TSL 1 (best) BASIC10.67□□□□□ -0.7
Cdh17Q9R100 Col6a6-202ENSMUST00000098441 8781 ntAPPRIS P2 TSL 5 BASIC10.67□□□□□ -0.7
Cdh17Q9R100 Cdk5rap1-201ENSMUST00000028990 1970 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Cdh17Q9R100 Pde3a-201ENSMUST00000043259 12302 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Cdh17Q9R100 Manea-201ENSMUST00000041374 4867 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Cdh17Q9R100 AC140462.2-201ENSMUST00000225718 2433 ntBASIC10.66□□□□□ -0.7
Cdh17Q9R100 Dcaf11-206ENSMUST00000128490 2660 ntAPPRIS P2 TSL 2 BASIC10.66□□□□□ -0.7
Cdh17Q9R100 Dcaf17-209ENSMUST00000154704 7739 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Cdh17Q9R100 Olfr520-202ENSMUST00000220185 1330 ntAPPRIS P1 TSL 5 BASIC10.66□□□□□ -0.7
Cdh17Q9R100 Gm9387-201ENSMUST00000098624 1320 ntBASIC10.66□□□□□ -0.7
Cdh17Q9R100 Il16-203ENSMUST00000145610 3183 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Cdh17Q9R100 Gm11735-201ENSMUST00000106377 1581 ntBASIC10.66□□□□□ -0.7
Cdh17Q9R100 Anxa7-201ENSMUST00000065504 2851 ntAPPRIS P2 TSL 1 (best) BASIC10.66□□□□□ -0.7
Cdh17Q9R100 AC090962.2-201ENSMUST00000225064 1801 ntBASIC10.66□□□□□ -0.7
Cdh17Q9R100 Slc39a14-210ENSMUST00000152067 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC10.66□□□□□ -0.7
Cdh17Q9R100 Ighv8-11-201ENSMUST00000103536 358 ntAPPRIS P1 BASIC10.66□□□□□ -0.7
Cdh17Q9R100 Gngt2-207ENSMUST00000107714 558 ntAPPRIS P1 TSL 3 BASIC10.66□□□□□ -0.7
Cdh17Q9R100 Rtn2-202ENSMUST00000108468 1076 ntAPPRIS ALT2 TSL 1 (best) BASIC10.66□□□□□ -0.7
Cdh17Q9R100 Sfxn5-204ENSMUST00000113788 514 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Cdh17Q9R100 4930589P08Rik-201ENSMUST00000129097 1084 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Cdh17Q9R100 Vmn2r-ps54-203ENSMUST00000150856 1142 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Cdh17Q9R100 Gm37458-201ENSMUST00000194055 410 ntBASIC10.66□□□□□ -0.7
Cdh17Q9R100 Gm40414-201ENSMUST00000197608 481 ntBASIC10.66□□□□□ -0.7
Cdh17Q9R100 CT485606.1-201ENSMUST00000213187 878 ntBASIC10.66□□□□□ -0.7
Cdh17Q9R100 CT010465.1-201ENSMUST00000222463 809 ntTSL 5 BASIC10.66□□□□□ -0.7
Cdh17Q9R100 Spcs1-203ENSMUST00000226374 592 ntBASIC10.66□□□□□ -0.7
Cdh17Q9R100 AC122035.1-201ENSMUST00000227576 1016 ntBASIC10.66□□□□□ -0.7
Cdh17Q9R100 Snx24-201ENSMUST00000025417 994 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Cdh17Q9R100 Mitd1-201ENSMUST00000027257 1231 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Cdh17Q9R100 AC124433.1-202ENSMUST00000224762 1535 ntBASIC10.66□□□□□ -0.7
Cdh17Q9R100 Avil-201ENSMUST00000026500 3033 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Cdh17Q9R100 Lingo1-201ENSMUST00000053568 3295 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Cdh17Q9R100 Ndor1-201ENSMUST00000100329 4517 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Cdh17Q9R100 Socs6-201ENSMUST00000070116 6036 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Cdh17Q9R100 Zfp354b-201ENSMUST00000109124 2455 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Cdh17Q9R100 Olfr370-203ENSMUST00000214156 2475 ntAPPRIS P1 TSL 5 BASIC10.66□□□□□ -0.7
Cdh17Q9R100 Slc30a8-201ENSMUST00000037240 1971 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Cdh17Q9R100 9530026P05Rik-204ENSMUST00000204449 1740 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Cdh17Q9R100 AC122367.1-201ENSMUST00000221978 1709 ntBASIC10.66□□□□□ -0.7
Cdh17Q9R100 Ap1m2-201ENSMUST00000003397 1706 ntAPPRIS P3 TSL 1 (best) BASIC10.66□□□□□ -0.7
Cdh17Q9R100 Il1rap-202ENSMUST00000096129 4438 ntAPPRIS ALT2 TSL 1 (best) BASIC10.66□□□□□ -0.7
Cdh17Q9R100 Acad9-201ENSMUST00000011492 3930 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Cdh17Q9R100 D930048N14Rik-202ENSMUST00000117859 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC10.66□□□□□ -0.7
Cdh17Q9R100 Myo7a-204ENSMUST00000107128 7506 ntAPPRIS ALT2 TSL 5 BASIC10.66□□□□□ -0.7
Cdh17Q9R100 Zfp330-201ENSMUST00000034147 1675 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Cdh17Q9R100 Rbm8a-206ENSMUST00000200647 2620 ntTSL 2 BASIC10.66□□□□□ -0.7
Cdh17Q9R100 Lrba-202ENSMUST00000192145 8843 ntAPPRIS ALT2 TSL 1 (best) BASIC10.66□□□□□ -0.7
Cdh17Q9R100 Rufy2-204ENSMUST00000131718 2816 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Cdh17Q9R100 Ly75-201ENSMUST00000028362 5172 ntAPPRIS P2 TSL 1 (best) BASIC10.66□□□□□ -0.7
Cdh17Q9R100 Ankub1-202ENSMUST00000197088 1854 ntAPPRIS P1 TSL 5 BASIC10.66□□□□□ -0.7
Cdh17Q9R100 Cenpn-203ENSMUST00000212263 1616 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Cdh17Q9R100 Vrtn-203ENSMUST00000167227 3440 ntAPPRIS P1 TSL 3 BASIC10.65□□□□□ -0.7
Cdh17Q9R100 Gal3st4-201ENSMUST00000100530 3162 ntAPPRIS P3 TSL 1 (best) BASIC10.65□□□□□ -0.7
Cdh17Q9R100 Gm45699-201ENSMUST00000212838 1576 ntTSL 2 BASIC10.65□□□□□ -0.7
Cdh17Q9R100 Tead3-207ENSMUST00000219703 1320 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
Cdh17Q9R100 Dennd4c-202ENSMUST00000082026 7940 ntAPPRIS ALT2 TSL 5 BASIC10.65□□□□□ -0.7
Cdh17Q9R100 Aldoa-201ENSMUST00000032934 1511 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Cdh17Q9R100 Gm20758-201ENSMUST00000220339 2171 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
Cdh17Q9R100 Elmo2-201ENSMUST00000071699 3247 ntAPPRIS ALT2 TSL 1 (best) BASIC10.65□□□□□ -0.7
Cdh17Q9R100 Tcn2-206ENSMUST00000109992 1945 ntAPPRIS P1 TSL 5 BASIC10.65□□□□□ -0.7
Cdh17Q9R100 Scaf1-201ENSMUST00000085383 4293 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Cdh17Q9R100 Avpr2-202ENSMUST00000101470 2787 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
Cdh17Q9R100 Serf2-202ENSMUST00000110615 876 ntTSL 2 BASIC10.65□□□□□ -0.7
Cdh17Q9R100 Rpl28-ps1-201ENSMUST00000121497 414 ntBASIC10.65□□□□□ -0.7
Retrieved 100 of 76,532 protein–RNA pairs in 50.7 ms