Protein–RNA interactions for Protein: Q9ES64

Ush1c, Harmonin, mousemouse

Predictions only

Length 910 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ush1cQ9ES64 Ccdc15-204ENSMUST00000216042 1669 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Ush1cQ9ES64 Stra6-201ENSMUST00000034880 2993 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Ush1cQ9ES64 Upp2-201ENSMUST00000059102 2498 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Ush1cQ9ES64 Tex21-202ENSMUST00000218426 1980 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Ush1cQ9ES64 Eif2ak4-203ENSMUST00000110869 1715 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Ush1cQ9ES64 A530053M12Rik-201ENSMUST00000187918 1467 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Ush1cQ9ES64 AC113441.2-201ENSMUST00000221538 1468 ntBASIC12.54□□□□□ -0.4
Ush1cQ9ES64 Ccdc40-201ENSMUST00000035935 4979 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Ush1cQ9ES64 Gpr37-201ENSMUST00000054867 4974 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Ush1cQ9ES64 Atg4b-201ENSMUST00000027502 4173 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Ush1cQ9ES64 Itgal-203ENSMUST00000118405 3909 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Ush1cQ9ES64 Ablim1-212ENSMUST00000111558 3123 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
Ush1cQ9ES64 Btnl4-201ENSMUST00000065841 1761 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
Ush1cQ9ES64 A930007I19Rik-201ENSMUST00000180737 2319 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Ush1cQ9ES64 Zmynd8-221ENSMUST00000177633 5093 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Ush1cQ9ES64 Apc-203ENSMUST00000115781 12346 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
Ush1cQ9ES64 Hsd3b5-201ENSMUST00000044094 1549 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Ush1cQ9ES64 Gm3294-201ENSMUST00000164104 7367 ntTSL 3 BASIC12.54□□□□□ -0.4
Ush1cQ9ES64 Ppm1f-201ENSMUST00000027373 4922 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Ush1cQ9ES64 Lmo7-205ENSMUST00000159314 5774 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Ush1cQ9ES64 Zfp606-202ENSMUST00000123589 3509 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Ush1cQ9ES64 Tnnt3-209ENSMUST00000105947 780 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
Ush1cQ9ES64 Myl2-203ENSMUST00000111751 889 ntAPPRIS P1 TSL 3 BASIC12.54□□□□□ -0.4
Ush1cQ9ES64 Camk1d-202ENSMUST00000114987 1295 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Ush1cQ9ES64 Dnmt3l-203ENSMUST00000131825 1113 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Ush1cQ9ES64 Gm13442-201ENSMUST00000135749 663 ntTSL 3 BASIC12.54□□□□□ -0.4
Ush1cQ9ES64 Dnmt3l-206ENSMUST00000139539 1279 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Ush1cQ9ES64 Tnni2-206ENSMUST00000149529 768 ntAPPRIS P1 TSL 2 BASIC12.54□□□□□ -0.4
Ush1cQ9ES64 Cmtm1-201ENSMUST00000159039 1130 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Ush1cQ9ES64 Rhoc-204ENSMUST00000176347 583 ntTSL 5 BASIC12.54□□□□□ -0.4
Ush1cQ9ES64 Gm25700-201ENSMUST00000177693 110 ntBASIC12.54□□□□□ -0.4
Ush1cQ9ES64 Gm9866-204ENSMUST00000183238 351 ntTSL 5 BASIC12.54□□□□□ -0.4
Ush1cQ9ES64 Gm2260-201ENSMUST00000184965 657 ntBASIC12.54□□□□□ -0.4
Ush1cQ9ES64 Gm19412-201ENSMUST00000185388 436 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Ush1cQ9ES64 Gm28345-201ENSMUST00000188769 1139 ntTSL 5 BASIC12.54□□□□□ -0.4
Ush1cQ9ES64 Gm28970-201ENSMUST00000191098 1139 ntTSL 5 BASIC12.54□□□□□ -0.4
Ush1cQ9ES64 Mllt11-204ENSMUST00000198948 793 ntAPPRIS P1 TSL 3 BASIC12.54□□□□□ -0.4
Ush1cQ9ES64 Gm32633-201ENSMUST00000205726 587 ntTSL 3 BASIC12.54□□□□□ -0.4
Ush1cQ9ES64 AC125206.1-201ENSMUST00000214070 739 ntTSL 5 BASIC12.54□□□□□ -0.4
Ush1cQ9ES64 Rab13-201ENSMUST00000065418 1107 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Ush1cQ9ES64 Ogdh-204ENSMUST00000101554 4106 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Ush1cQ9ES64 Bora-201ENSMUST00000022656 2726 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Ush1cQ9ES64 Plin2-201ENSMUST00000000466 1888 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Ush1cQ9ES64 Atp6v0a4-202ENSMUST00000114908 3307 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Ush1cQ9ES64 Nampt-201ENSMUST00000020886 4527 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Ush1cQ9ES64 AI606181-201ENSMUST00000099454 2796 ntAPPRIS P1 BASIC12.54□□□□□ -0.4
Ush1cQ9ES64 CT010447.1-201ENSMUST00000225657 1608 ntBASIC12.54□□□□□ -0.4
Ush1cQ9ES64 Dcaf8-201ENSMUST00000074144 4656 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Ush1cQ9ES64 Ttc16-206ENSMUST00000161430 2874 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
Ush1cQ9ES64 Rgs17-203ENSMUST00000117676 1651 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Ush1cQ9ES64 Avil-203ENSMUST00000129173 2925 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
Ush1cQ9ES64 Galm-201ENSMUST00000039205 2314 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Ush1cQ9ES64 Thsd7b-201ENSMUST00000040311 3895 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Ush1cQ9ES64 Arntl2-202ENSMUST00000111636 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Ush1cQ9ES64 Arntl2-203ENSMUST00000111638 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Ush1cQ9ES64 Arntl2-201ENSMUST00000080530 1740 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
Ush1cQ9ES64 Gm5846-201ENSMUST00000193146 1414 ntBASIC12.54□□□□□ -0.4
Ush1cQ9ES64 Slf2-201ENSMUST00000096053 6880 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Ush1cQ9ES64 Ces2h-201ENSMUST00000172032 2445 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
Ush1cQ9ES64 Pde4b-203ENSMUST00000097950 2756 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Ush1cQ9ES64 Shank2-201ENSMUST00000097929 4418 ntTSL 5 BASIC12.53□□□□□ -0.4
Ush1cQ9ES64 Sun1-204ENSMUST00000110882 2454 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
Ush1cQ9ES64 Gm29222-201ENSMUST00000185442 2167 ntTSL 5 BASIC12.53□□□□□ -0.4
Ush1cQ9ES64 Gm29449-201ENSMUST00000187820 2168 ntTSL 5 BASIC12.53□□□□□ -0.4
Ush1cQ9ES64 Gm28104-201ENSMUST00000188331 2168 ntTSL 5 BASIC12.53□□□□□ -0.4
Ush1cQ9ES64 Gm28743-201ENSMUST00000189014 2168 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Ush1cQ9ES64 Gm29384-201ENSMUST00000190852 2168 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Ush1cQ9ES64 Gm37538-201ENSMUST00000192417 2168 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Ush1cQ9ES64 Gm7742-201ENSMUST00000167648 1527 ntBASIC12.53□□□□□ -0.4
Ush1cQ9ES64 Gm7732-201ENSMUST00000170486 1527 ntBASIC12.53□□□□□ -0.4
Ush1cQ9ES64 Gm7740-201ENSMUST00000186171 1527 ntBASIC12.53□□□□□ -0.4
Ush1cQ9ES64 Gm7736-201ENSMUST00000096981 1527 ntBASIC12.53□□□□□ -0.4
Ush1cQ9ES64 Kalrn-203ENSMUST00000114947 2922 ntTSL 5 BASIC12.53□□□□□ -0.4
Ush1cQ9ES64 Zbtb8b-201ENSMUST00000053042 3288 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Ush1cQ9ES64 Ctsa-202ENSMUST00000103092 3646 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
Ush1cQ9ES64 Cfb-201ENSMUST00000025229 2737 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Ush1cQ9ES64 Cela2a-201ENSMUST00000102481 1070 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Ush1cQ9ES64 Gm11564-201ENSMUST00000105055 691 ntAPPRIS P1 BASIC12.53□□□□□ -0.4
Ush1cQ9ES64 Mrpl55-205ENSMUST00000108787 718 ntTSL 2 BASIC12.53□□□□□ -0.4
Ush1cQ9ES64 Rap1a-ps2-201ENSMUST00000118467 559 ntBASIC12.53□□□□□ -0.4
Ush1cQ9ES64 4930471C06Rik-202ENSMUST00000143070 579 ntTSL 3 BASIC12.53□□□□□ -0.4
Ush1cQ9ES64 Swi5-207ENSMUST00000183946 768 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
Ush1cQ9ES64 Gm8856-201ENSMUST00000185254 1144 ntBASIC12.53□□□□□ -0.4
Ush1cQ9ES64 Gm38321-201ENSMUST00000195053 235 ntBASIC12.53□□□□□ -0.4
Ush1cQ9ES64 Hax1-205ENSMUST00000197767 1092 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
Ush1cQ9ES64 Gm43962-201ENSMUST00000203898 190 ntBASIC12.53□□□□□ -0.4
Ush1cQ9ES64 Rps4l-202ENSMUST00000204242 789 ntBASIC12.53□□□□□ -0.4
Ush1cQ9ES64 Gm45691-201ENSMUST00000206905 1120 ntBASIC12.53□□□□□ -0.4
Ush1cQ9ES64 Gm45598-202ENSMUST00000210719 986 ntBASIC12.53□□□□□ -0.4
Ush1cQ9ES64 Gzmn-202ENSMUST00000225535 989 ntBASIC12.53□□□□□ -0.4
Ush1cQ9ES64 Nit2-201ENSMUST00000023432 1280 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Ush1cQ9ES64 Nmur1-201ENSMUST00000027440 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Ush1cQ9ES64 Cldn17-201ENSMUST00000069549 1172 ntAPPRIS P1 BASIC12.53□□□□□ -0.4
Ush1cQ9ES64 Olfr61-201ENSMUST00000084455 936 ntAPPRIS P1 BASIC12.53□□□□□ -0.4
Ush1cQ9ES64 C1rb-201ENSMUST00000184647 2429 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Ush1cQ9ES64 C330027C09Rik-202ENSMUST00000117994 3977 ntTSL 5 BASIC12.53□□□□□ -0.4
Ush1cQ9ES64 Cd160-203ENSMUST00000165991 2458 ntAPPRIS ALT2 TSL 3 BASIC12.53□□□□□ -0.4
Ush1cQ9ES64 Anxa11os-201ENSMUST00000184083 2479 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Ush1cQ9ES64 5430419D17Rik-203ENSMUST00000208921 7948 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
Ush1cQ9ES64 Med12l-206ENSMUST00000199659 11006 ntAPPRIS P2 TSL 5 BASIC12.53□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 50.9 ms