Protein–RNA interactions for Protein: Q9DB34

Chmp2a, Charged multivesicular body protein 2a, mousemouse

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp2aQ9DB34 Prss46-201ENSMUST00000119427 1211 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Chmp2aQ9DB34 Kcnmb4os1-201ENSMUST00000134586 824 ntTSL 2 BASIC11.45□□□□□ -0.58
Chmp2aQ9DB34 Hsh2d-202ENSMUST00000165324 1238 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Chmp2aQ9DB34 Prr3-206ENSMUST00000173585 770 ntAPPRIS ALT2 TSL 2 BASIC11.45□□□□□ -0.58
Chmp2aQ9DB34 Gm25072-201ENSMUST00000175233 235 ntBASIC11.45□□□□□ -0.58
Chmp2aQ9DB34 Prss46-202ENSMUST00000176403 1257 ntAPPRIS P2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Chmp2aQ9DB34 Gm7929-201ENSMUST00000178711 624 ntAPPRIS P1 TSL 5 BASIC11.45□□□□□ -0.58
Chmp2aQ9DB34 Gm3015-202ENSMUST00000179803 624 ntAPPRIS P1 TSL 5 BASIC11.45□□□□□ -0.58
Chmp2aQ9DB34 A430105J06Rik-201ENSMUST00000180869 1275 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Chmp2aQ9DB34 AU020206-201ENSMUST00000181224 656 ntTSL 2 BASIC11.45□□□□□ -0.58
Chmp2aQ9DB34 Sbsn-205ENSMUST00000182721 677 ntAPPRIS ALT2 TSL 3 BASIC11.45□□□□□ -0.58
Chmp2aQ9DB34 Gm9369-201ENSMUST00000196009 733 ntBASIC11.45□□□□□ -0.58
Chmp2aQ9DB34 Gm35822-201ENSMUST00000204954 562 ntTSL 3 BASIC11.45□□□□□ -0.58
Chmp2aQ9DB34 Gm44593-201ENSMUST00000208372 1249 ntTSL 5 BASIC11.45□□□□□ -0.58
Chmp2aQ9DB34 Gm45572-201ENSMUST00000211774 750 ntTSL 5 BASIC11.45□□□□□ -0.58
Chmp2aQ9DB34 Il18-203ENSMUST00000213916 885 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Chmp2aQ9DB34 Cbx3-ps8-201ENSMUST00000214564 548 ntBASIC11.45□□□□□ -0.58
Chmp2aQ9DB34 AC134248.1-201ENSMUST00000216113 1176 ntBASIC11.45□□□□□ -0.58
Chmp2aQ9DB34 1700011B04Rik-204ENSMUST00000220859 422 ntTSL 5 BASIC11.45□□□□□ -0.58
Chmp2aQ9DB34 AC122346.3-201ENSMUST00000223983 306 ntBASIC11.45□□□□□ -0.58
Chmp2aQ9DB34 AC165154.1-201ENSMUST00000226661 340 ntBASIC11.45□□□□□ -0.58
Chmp2aQ9DB34 AC154589.2-201ENSMUST00000228847 251 ntBASIC11.45□□□□□ -0.58
Chmp2aQ9DB34 n-R5s211-201ENSMUST00000093689 119 ntBASIC11.45□□□□□ -0.58
Chmp2aQ9DB34 Trip4-202ENSMUST00000119245 4211 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Chmp2aQ9DB34 Npl-201ENSMUST00000041874 1735 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Chmp2aQ9DB34 4930517G19Rik-201ENSMUST00000206152 1676 ntBASIC11.45□□□□□ -0.58
Chmp2aQ9DB34 Mapkbp1-201ENSMUST00000066058 6942 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Chmp2aQ9DB34 Dync1i2-201ENSMUST00000081710 2631 ntAPPRIS P3 TSL 1 (best) BASIC11.45□□□□□ -0.58
Chmp2aQ9DB34 Rad23a-201ENSMUST00000003911 2074 ntAPPRIS P3 TSL 1 (best) BASIC11.45□□□□□ -0.58
Chmp2aQ9DB34 Pex26-203ENSMUST00000120066 3861 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Chmp2aQ9DB34 Ccdc136-207ENSMUST00000154619 3356 ntAPPRIS ALT2 TSL 5 BASIC11.45□□□□□ -0.58
Chmp2aQ9DB34 Prr5l-210ENSMUST00000171088 4296 ntAPPRIS P1 TSL 5 BASIC11.45□□□□□ -0.58
Chmp2aQ9DB34 Kcnma1-207ENSMUST00000172099 3354 ntAPPRIS ALT2 TSL 5 BASIC11.45□□□□□ -0.58
Chmp2aQ9DB34 Slc38a3-209ENSMUST00000193932 2463 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Chmp2aQ9DB34 Rapgef3-205ENSMUST00000129223 3750 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Chmp2aQ9DB34 Prom2-202ENSMUST00000103214 4190 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Chmp2aQ9DB34 6030443J06Rik-201ENSMUST00000181209 2380 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Chmp2aQ9DB34 Gm45187-201ENSMUST00000207697 2760 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Chmp2aQ9DB34 Rad51ap2-201ENSMUST00000124065 3175 ntAPPRIS P1 TSL 2 BASIC11.44□□□□□ -0.58
Chmp2aQ9DB34 Ing1-204ENSMUST00000210041 1881 ntTSL 5 BASIC11.44□□□□□ -0.58
Chmp2aQ9DB34 Prdm9-205ENSMUST00000147532 1447 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Chmp2aQ9DB34 Smco1-201ENSMUST00000093183 1408 ntAPPRIS P1 TSL 5 BASIC11.44□□□□□ -0.58
Chmp2aQ9DB34 Sorcs1-208ENSMUST00000211687 7080 ntAPPRIS P2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Chmp2aQ9DB34 Agpat3-211ENSMUST00000166360 3439 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Chmp2aQ9DB34 Fam234b-201ENSMUST00000111915 4221 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Chmp2aQ9DB34 Gm37660-201ENSMUST00000192754 1732 ntBASIC11.44□□□□□ -0.58
Chmp2aQ9DB34 Il34-201ENSMUST00000076846 1709 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Chmp2aQ9DB34 Mtss1l-205ENSMUST00000144041 3225 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Chmp2aQ9DB34 Pls3-201ENSMUST00000033547 3242 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Chmp2aQ9DB34 Rab30-202ENSMUST00000107179 1304 ntTSL 5 BASIC11.44□□□□□ -0.58
Chmp2aQ9DB34 Pml-202ENSMUST00000114136 4343 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Chmp2aQ9DB34 Pcdhga1-201ENSMUST00000194190 4692 ntAPPRIS P2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Chmp2aQ9DB34 Ccnk-202ENSMUST00000221167 2789 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Chmp2aQ9DB34 Rtn3-204ENSMUST00000088171 4973 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Chmp2aQ9DB34 Cat-202ENSMUST00000111168 779 ntTSL 3 BASIC11.44□□□□□ -0.58
Chmp2aQ9DB34 Gm12030-201ENSMUST00000121917 223 ntBASIC11.44□□□□□ -0.58
Chmp2aQ9DB34 Gm14154-201ENSMUST00000142642 579 ntTSL 3 BASIC11.44□□□□□ -0.58
Chmp2aQ9DB34 Gm25554-201ENSMUST00000158075 113 ntBASIC11.44□□□□□ -0.58
Chmp2aQ9DB34 Agtpbp1-216ENSMUST00000168821 721 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Chmp2aQ9DB34 Gm27438-201ENSMUST00000183480 110 ntBASIC11.44□□□□□ -0.58
Chmp2aQ9DB34 Gm4753-201ENSMUST00000188327 1255 ntBASIC11.44□□□□□ -0.58
Chmp2aQ9DB34 Gm29410-201ENSMUST00000188383 694 ntBASIC11.44□□□□□ -0.58
Chmp2aQ9DB34 C630004L07Rik-201ENSMUST00000193236 1275 ntBASIC11.44□□□□□ -0.58
Chmp2aQ9DB34 Gm37638-201ENSMUST00000194337 1123 ntBASIC11.44□□□□□ -0.58
Chmp2aQ9DB34 Gm31401-201ENSMUST00000207352 734 ntTSL 3 BASIC11.44□□□□□ -0.58
Chmp2aQ9DB34 4933402C05Rik-201ENSMUST00000208189 1035 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Chmp2aQ9DB34 Gm45592-201ENSMUST00000209605 1043 ntBASIC11.44□□□□□ -0.58
Chmp2aQ9DB34 AC132901.1-201ENSMUST00000224345 508 ntBASIC11.44□□□□□ -0.58
Chmp2aQ9DB34 Tff2-201ENSMUST00000024826 584 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Chmp2aQ9DB34 Fam212a-201ENSMUST00000048568 1025 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Chmp2aQ9DB34 Shank2-201ENSMUST00000097929 4418 ntTSL 5 BASIC11.44□□□□□ -0.58
Chmp2aQ9DB34 Fbln2-202ENSMUST00000113498 4644 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Chmp2aQ9DB34 Edaradd-201ENSMUST00000179308 6668 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Chmp2aQ9DB34 AC149588.2-201ENSMUST00000228182 1859 ntBASIC11.44□□□□□ -0.58
Chmp2aQ9DB34 Atp11c-201ENSMUST00000033480 5939 ntAPPRIS ALT2 TSL 5 BASIC11.44□□□□□ -0.58
Chmp2aQ9DB34 Il17rd-201ENSMUST00000035336 8280 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Chmp2aQ9DB34 Reps1-210ENSMUST00000164556 2537 ntAPPRIS ALT1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Chmp2aQ9DB34 Gm14005-209ENSMUST00000224993 1832 ntBASIC11.44□□□□□ -0.58
Chmp2aQ9DB34 Camta2-201ENSMUST00000036299 4495 ntAPPRIS P3 TSL 1 (best) BASIC11.44□□□□□ -0.58
Chmp2aQ9DB34 Rwdd3-204ENSMUST00000106466 1484 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Chmp2aQ9DB34 Gm6268-201ENSMUST00000115253 1453 ntAPPRIS P1 TSL 5 BASIC11.44□□□□□ -0.58
Chmp2aQ9DB34 Dzip1l-203ENSMUST00000112885 4350 ntAPPRIS P3 TSL 1 (best) BASIC11.44□□□□□ -0.58
Chmp2aQ9DB34 Inpp5j-201ENSMUST00000044507 3370 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Chmp2aQ9DB34 Fam3a-201ENSMUST00000015427 1427 ntAPPRIS P1 TSL 5 BASIC11.43□□□□□ -0.58
Chmp2aQ9DB34 Mindy4-201ENSMUST00000053094 4270 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Chmp2aQ9DB34 5730405O15Rik-201ENSMUST00000127521 1749 ntTSL 2 BASIC11.43□□□□□ -0.58
Chmp2aQ9DB34 Tmem246-201ENSMUST00000042750 2989 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Chmp2aQ9DB34 Nphs1-203ENSMUST00000126297 3877 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Chmp2aQ9DB34 Clec10a-209ENSMUST00000178945 2332 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Chmp2aQ9DB34 Ttll10-202ENSMUST00000051509 2304 ntAPPRIS P2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Chmp2aQ9DB34 Gm45206-201ENSMUST00000206885 2285 ntBASIC11.43□□□□□ -0.58
Chmp2aQ9DB34 Zcchc8-204ENSMUST00000196282 4350 ntAPPRIS P1 TSL 5 BASIC11.43□□□□□ -0.58
Chmp2aQ9DB34 Mapkap1-209ENSMUST00000147337 3111 ntAPPRIS P2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Chmp2aQ9DB34 Cacna1c-226ENSMUST00000219833 7591 ntTSL 5 BASIC11.43□□□□□ -0.58
Chmp2aQ9DB34 Gm15987-201ENSMUST00000141700 2231 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Chmp2aQ9DB34 Pdcd10-205ENSMUST00000161137 1927 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Chmp2aQ9DB34 Aurkc-203ENSMUST00000207711 1320 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Chmp2aQ9DB34 Sln-201ENSMUST00000048485 1318 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Chmp2aQ9DB34 AW549877-201ENSMUST00000046633 5076 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Chmp2aQ9DB34 Nsd3-210ENSMUST00000153597 1865 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Retrieved 100 of 76,532 protein–RNA pairs in 41.7 ms