Protein–RNA interactions for Protein: Q99K46

Usp11, Ubiquitin carboxyl-terminal hydrolase 11, mousemouse

Predictions only

Length 921 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp11Q99K46 Bcl7a-202ENSMUST00000117971 4642 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Usp11Q99K46 Pde4b-203ENSMUST00000097950 2756 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Usp11Q99K46 Abhd18-201ENSMUST00000108077 3277 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Usp11Q99K46 Zmat1-201ENSMUST00000064659 3501 ntAPPRIS P2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Usp11Q99K46 Fcrla-201ENSMUST00000046322 1679 ntAPPRIS P4 TSL 1 (best) BASIC11.58□□□□□ -0.56
Usp11Q99K46 Gm38115-201ENSMUST00000194317 2413 ntTSL 5 BASIC11.58□□□□□ -0.56
Usp11Q99K46 Dnajb12-204ENSMUST00000146590 3070 ntAPPRIS P2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Usp11Q99K46 Plek2-201ENSMUST00000021544 1583 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Usp11Q99K46 Dab2-211ENSMUST00000161812 2710 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Usp11Q99K46 Parvg-207ENSMUST00000163667 2700 ntAPPRIS ALT2 TSL 5 BASIC11.58□□□□□ -0.56
Usp11Q99K46 Pisd-203ENSMUST00000120591 2491 ntAPPRIS ALT2 TSL 5 BASIC11.58□□□□□ -0.56
Usp11Q99K46 Snhg18-201ENSMUST00000181536 1486 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Usp11Q99K46 Kif2c-202ENSMUST00000106436 2378 ntAPPRIS ALT2 TSL 5 BASIC11.57□□□□□ -0.56
Usp11Q99K46 Itgal-205ENSMUST00000170971 3662 ntAPPRIS ALT2 TSL 5 BASIC11.57□□□□□ -0.56
Usp11Q99K46 Zfp36-201ENSMUST00000051241 2790 ntAPPRIS P2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Usp11Q99K46 Gm37031-201ENSMUST00000195487 2530 ntBASIC11.57□□□□□ -0.56
Usp11Q99K46 Gm44663-201ENSMUST00000206898 3150 ntBASIC11.57□□□□□ -0.56
Usp11Q99K46 Ddx52-201ENSMUST00000049257 3194 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Usp11Q99K46 Gm37613-201ENSMUST00000195677 3580 ntBASIC11.57□□□□□ -0.56
Usp11Q99K46 Mamdc2-201ENSMUST00000036069 3338 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Usp11Q99K46 Gsdmcl-ps-203ENSMUST00000188367 1375 ntBASIC11.57□□□□□ -0.56
Usp11Q99K46 Tpd52l2-202ENSMUST00000069712 1799 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Usp11Q99K46 Nfya-201ENSMUST00000046719 3645 ntAPPRIS ALT1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Usp11Q99K46 Ckap2-201ENSMUST00000046916 2593 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Usp11Q99K46 Shank2-201ENSMUST00000097929 4418 ntTSL 5 BASIC11.57□□□□□ -0.56
Usp11Q99K46 AC122273.1-201ENSMUST00000213634 2327 ntBASIC11.57□□□□□ -0.56
Usp11Q99K46 Rnf41-201ENSMUST00000096386 3144 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Usp11Q99K46 Gm21358-201ENSMUST00000191645 1659 ntBASIC11.57□□□□□ -0.56
Usp11Q99K46 Gm25076-201ENSMUST00000104098 132 ntBASIC11.57□□□□□ -0.56
Usp11Q99K46 Cd300ld2-202ENSMUST00000106578 918 ntAPPRIS P1 TSL 5 BASIC11.57□□□□□ -0.56
Usp11Q99K46 Krtap4-16-201ENSMUST00000107437 954 ntAPPRIS P1 BASIC11.57□□□□□ -0.56
Usp11Q99K46 Rtn2-202ENSMUST00000108468 1076 ntAPPRIS ALT2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Usp11Q99K46 Fam129a-203ENSMUST00000111875 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Usp11Q99K46 Gm15131-201ENSMUST00000119124 595 ntBASIC11.57□□□□□ -0.56
Usp11Q99K46 Gm15374-201ENSMUST00000119313 844 ntBASIC11.57□□□□□ -0.56
Usp11Q99K46 Aamdc-203ENSMUST00000124552 618 ntTSL 3 BASIC11.57□□□□□ -0.56
Usp11Q99K46 Mrpl20-202ENSMUST00000130188 442 ntTSL 3 BASIC11.57□□□□□ -0.56
Usp11Q99K46 Gm11772-201ENSMUST00000136542 532 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Usp11Q99K46 Cideb-201ENSMUST00000001497 1212 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Usp11Q99K46 2310057J18Rik-204ENSMUST00000152363 1043 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Usp11Q99K46 Gm22334-201ENSMUST00000158070 133 ntBASIC11.57□□□□□ -0.56
Usp11Q99K46 Fhit-204ENSMUST00000161302 860 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Usp11Q99K46 Apoe-210ENSMUST00000174710 514 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Usp11Q99K46 Gm19459-201ENSMUST00000176240 835 ntBASIC11.57□□□□□ -0.56
Usp11Q99K46 Higd1c-202ENSMUST00000177211 555 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Usp11Q99K46 Gm3551-201ENSMUST00000190750 664 ntBASIC11.57□□□□□ -0.56
Usp11Q99K46 4930422M22Rik-201ENSMUST00000191492 948 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Usp11Q99K46 Gm37299-201ENSMUST00000193951 826 ntBASIC11.57□□□□□ -0.56
Usp11Q99K46 Gm9645-201ENSMUST00000197131 792 ntBASIC11.57□□□□□ -0.56
Usp11Q99K46 Gm44980-201ENSMUST00000205826 314 ntBASIC11.57□□□□□ -0.56
Usp11Q99K46 Saa2-202ENSMUST00000210272 511 ntTSL 3 BASIC11.57□□□□□ -0.56
Usp11Q99K46 Gm45856-201ENSMUST00000212752 416 ntBASIC11.57□□□□□ -0.56
Usp11Q99K46 AC122891.1-201ENSMUST00000218671 268 ntBASIC11.57□□□□□ -0.56
Usp11Q99K46 Emp3-201ENSMUST00000038876 736 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Usp11Q99K46 Sstr2-201ENSMUST00000067591 1041 ntTSL 2 BASIC11.57□□□□□ -0.56
Usp11Q99K46 Gm10179-201ENSMUST00000086233 688 ntBASIC11.57□□□□□ -0.56
Usp11Q99K46 Hsd3b6-201ENSMUST00000029463 1802 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Usp11Q99K46 Nrxn1-215ENSMUST00000173917 1439 ntTSL 2 BASIC11.57□□□□□ -0.56
Usp11Q99K46 Hnrnpc-210ENSMUST00000228232 2535 ntAPPRIS P5 BASIC11.57□□□□□ -0.56
Usp11Q99K46 Tfr2-207ENSMUST00000198866 3072 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Usp11Q99K46 Crebrf-203ENSMUST00000142539 2674 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Usp11Q99K46 Rbm27-201ENSMUST00000046972 6134 ntAPPRIS ALT2 TSL 5 BASIC11.57□□□□□ -0.56
Usp11Q99K46 Gramd1b-212ENSMUST00000165104 3824 ntAPPRIS P2 TSL 5 BASIC11.57□□□□□ -0.56
Usp11Q99K46 Palb2-204ENSMUST00000106469 2559 ntAPPRIS ALT2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Usp11Q99K46 Shroom2-202ENSMUST00000101141 7494 ntAPPRIS P3 TSL 1 (best) BASIC11.57□□□□□ -0.56
Usp11Q99K46 Cage1-201ENSMUST00000074969 2856 ntAPPRIS P1 TSL 5 BASIC11.57□□□□□ -0.56
Usp11Q99K46 Sap18-204ENSMUST00000128764 5125 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Usp11Q99K46 1810014B01Rik-202ENSMUST00000218095 1622 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Usp11Q99K46 1700010I14Rik-201ENSMUST00000024650 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Usp11Q99K46 Mdm1-201ENSMUST00000020437 3074 ntAPPRIS P3 TSL 1 (best) BASIC11.56□□□□□ -0.56
Usp11Q99K46 Sirpa-204ENSMUST00000103203 3674 ntAPPRIS P3 TSL 5 BASIC11.56□□□□□ -0.56
Usp11Q99K46 Mthfd1l-203ENSMUST00000120585 3687 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Usp11Q99K46 Ddx21-201ENSMUST00000045866 4722 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Usp11Q99K46 Clrn1-203ENSMUST00000072551 1662 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Usp11Q99K46 Mical1-203ENSMUST00000119962 3565 ntAPPRIS ALT2 TSL 5 BASIC11.56□□□□□ -0.56
Usp11Q99K46 Stat5a-202ENSMUST00000107356 3738 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Usp11Q99K46 Cnga4-202ENSMUST00000210344 1977 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Usp11Q99K46 Rbms3-201ENSMUST00000044901 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Usp11Q99K46 Dync1i2-208ENSMUST00000112144 2565 ntAPPRIS ALT1 TSL 5 BASIC11.56□□□□□ -0.56
Usp11Q99K46 Ncf1-202ENSMUST00000111275 2721 ntAPPRIS P3 TSL 1 (best) BASIC11.56□□□□□ -0.56
Usp11Q99K46 Btbd7-206ENSMUST00000223554 8157 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Usp11Q99K46 Flna-201ENSMUST00000033699 8312 ntAPPRIS ALT2 TSL 5 BASIC11.56□□□□□ -0.56
Usp11Q99K46 Eif5a-206ENSMUST00000108609 849 ntAPPRIS P1 TSL 3 BASIC11.56□□□□□ -0.56
Usp11Q99K46 Asns-202ENSMUST00000115542 2016 ntAPPRIS P1 TSL 5 BASIC11.56□□□□□ -0.56
Usp11Q99K46 Gsto2-202ENSMUST00000120645 1277 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Usp11Q99K46 Gm11246-201ENSMUST00000120880 345 ntBASIC11.56□□□□□ -0.56
Usp11Q99K46 Tia1-211ENSMUST00000130967 1445 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Usp11Q99K46 Gm13257-201ENSMUST00000132840 665 ntTSL 3 BASIC11.56□□□□□ -0.56
Usp11Q99K46 Gm11815-201ENSMUST00000139423 708 ntTSL 5 BASIC11.56□□□□□ -0.56
Usp11Q99K46 Aamdc-213ENSMUST00000154853 883 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Usp11Q99K46 Etv1-211ENSMUST00000162563 1865 ntAPPRIS P1 TSL 5 BASIC11.56□□□□□ -0.56
Usp11Q99K46 F12-202ENSMUST00000170921 478 ntTSL 3 BASIC11.56□□□□□ -0.56
Usp11Q99K46 Gm5342-201ENSMUST00000181982 1003 ntBASIC11.56□□□□□ -0.56
Usp11Q99K46 Ly6e-203ENSMUST00000185861 838 ntAPPRIS P1 TSL 2 BASIC11.56□□□□□ -0.56
Usp11Q99K46 1700088E04Rik-203ENSMUST00000186053 535 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Usp11Q99K46 Med8-201ENSMUST00000019229 1145 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Usp11Q99K46 3110080O07Rik-201ENSMUST00000193469 1021 ntBASIC11.56□□□□□ -0.56
Usp11Q99K46 Gm37458-201ENSMUST00000194055 410 ntBASIC11.56□□□□□ -0.56
Usp11Q99K46 4930413E15Rik-201ENSMUST00000202500 1290 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Usp11Q99K46 Gm4593-201ENSMUST00000205334 1555 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Retrieved 100 of 76,532 protein–RNA pairs in 44.9 ms