Protein–RNA interactions for Protein: Q91V04

Tram1, Translocating chain-associated membrane protein 1, mousemouse

Predictions only

Length 374 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tram1Q91V04 Zfp658-201ENSMUST00000005597 2664 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Tram1Q91V04 Echdc1-201ENSMUST00000020034 3856 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
Tram1Q91V04 Tubb5-201ENSMUST00000001566 2649 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Tram1Q91V04 Hmgb2-201ENSMUST00000067925 2628 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Tram1Q91V04 Nkap-201ENSMUST00000016553 4230 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Tram1Q91V04 Csrnp3-208ENSMUST00000176109 2958 ntAPPRIS ALT2 TSL 5 BASIC9.4□□□□□ -0.9
Tram1Q91V04 Nlgn3-206ENSMUST00000151528 8541 ntAPPRIS ALT2 TSL 5 BASIC9.4□□□□□ -0.9
Tram1Q91V04 Tardbp-210ENSMUST00000172073 6513 ntTSL 5 BASIC9.4□□□□□ -0.9
Tram1Q91V04 Vipas39-202ENSMUST00000072744 2524 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Tram1Q91V04 Slc24a1-201ENSMUST00000037798 5213 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Tram1Q91V04 Gadl1-202ENSMUST00000119291 1729 ntAPPRIS ALT2 TSL 1 (best) BASIC9.4□□□□□ -0.9
Tram1Q91V04 Tchhl1-201ENSMUST00000029516 2066 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Tram1Q91V04 Casz1-201ENSMUST00000094464 4349 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
Tram1Q91V04 Ddx25-201ENSMUST00000034612 6934 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Tram1Q91V04 4921507G05Rik-201ENSMUST00000181348 1653 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
Tram1Q91V04 Grb10-202ENSMUST00000109653 2048 ntTSL 5 BASIC9.4□□□□□ -0.9
Tram1Q91V04 Mfn2-204ENSMUST00000105716 4241 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Tram1Q91V04 Sap30bpos-201ENSMUST00000132264 2352 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
Tram1Q91V04 Gm15370-201ENSMUST00000117158 253 ntBASIC9.4□□□□□ -0.9
Tram1Q91V04 Gm12347-201ENSMUST00000127883 470 ntTSL 3 BASIC9.4□□□□□ -0.9
Tram1Q91V04 1700007P06Rik-201ENSMUST00000160380 823 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
Tram1Q91V04 Gm8459-201ENSMUST00000162504 760 ntBASIC9.4□□□□□ -0.9
Tram1Q91V04 H2al1i-201ENSMUST00000164729 318 ntAPPRIS P1 BASIC9.4□□□□□ -0.9
Tram1Q91V04 Erh-202ENSMUST00000166931 506 ntTSL 2 BASIC9.4□□□□□ -0.9
Tram1Q91V04 Gm7008-202ENSMUST00000170019 402 ntTSL 2 BASIC9.4□□□□□ -0.9
Tram1Q91V04 H2al1h-201ENSMUST00000177926 318 ntAPPRIS P1 BASIC9.4□□□□□ -0.9
Tram1Q91V04 H2al1d-201ENSMUST00000178595 318 ntAPPRIS P1 BASIC9.4□□□□□ -0.9
Tram1Q91V04 H2al1c-201ENSMUST00000178806 318 ntAPPRIS P1 BASIC9.4□□□□□ -0.9
Tram1Q91V04 H2al1f-201ENSMUST00000179004 318 ntAPPRIS P1 BASIC9.4□□□□□ -0.9
Tram1Q91V04 2010320M18Rik-201ENSMUST00000191396 1009 ntBASIC9.4□□□□□ -0.9
Tram1Q91V04 Hax1-206ENSMUST00000197786 857 ntAPPRIS ALT2 TSL 1 (best) BASIC9.4□□□□□ -0.9
Tram1Q91V04 Gm18038-201ENSMUST00000197900 485 ntBASIC9.4□□□□□ -0.9
Tram1Q91V04 AY036118-201ENSMUST00000200021 923 ntBASIC9.4□□□□□ -0.9
Tram1Q91V04 1700003I16Rik-201ENSMUST00000205198 1058 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
Tram1Q91V04 Tm2d3-207ENSMUST00000206517 905 ntAPPRIS ALT2 TSL 5 BASIC9.4□□□□□ -0.9
Tram1Q91V04 Gm31224-201ENSMUST00000212682 513 ntTSL 3 BASIC9.4□□□□□ -0.9
Tram1Q91V04 CT025533.2-201ENSMUST00000228715 1248 ntBASIC9.4□□□□□ -0.9
Tram1Q91V04 Lrrc52-201ENSMUST00000036643 1143 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Tram1Q91V04 Tcn2-205ENSMUST00000109991 1943 ntAPPRIS P1 TSL 5 BASIC9.4□□□□□ -0.9
Tram1Q91V04 Slc27a5-201ENSMUST00000032539 2288 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Tram1Q91V04 Astn1-201ENSMUST00000046110 7195 ntAPPRIS ALT2 TSL 1 (best) BASIC9.4□□□□□ -0.9
Tram1Q91V04 Duxbl1-201ENSMUST00000049793 2266 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Tram1Q91V04 Cap1-201ENSMUST00000069533 2620 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Tram1Q91V04 Ppp2r2a-201ENSMUST00000089230 4010 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Tram1Q91V04 Gm21817-201ENSMUST00000178584 2583 ntBASIC9.4□□□□□ -0.9
Tram1Q91V04 Sh3gl2-204ENSMUST00000107189 3231 ntTSL 1 (best) BASIC9.4□□□□□ -0.91
Tram1Q91V04 Sun1-203ENSMUST00000100517 1522 ntTSL 1 (best) BASIC9.4□□□□□ -0.91
Tram1Q91V04 P3h1-202ENSMUST00000081606 2820 ntAPPRIS ALT2 TSL 1 (best) BASIC9.4□□□□□ -0.91
Tram1Q91V04 Agbl2-201ENSMUST00000037206 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC9.4□□□□□ -0.91
Tram1Q91V04 Eno2-201ENSMUST00000004378 2795 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.91
Tram1Q91V04 Wnk1-224ENSMUST00000203030 8163 ntAPPRIS ALT2 TSL 1 (best) BASIC9.4□□□□□ -0.91
Tram1Q91V04 Gm43660-201ENSMUST00000200956 6548 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
Tram1Q91V04 4732487G21Rik-201ENSMUST00000181495 2664 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
Tram1Q91V04 Gm45495-201ENSMUST00000200940 1700 ntBASIC9.39□□□□□ -0.91
Tram1Q91V04 Vgll4-201ENSMUST00000032459 2028 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Tram1Q91V04 Dhdh-201ENSMUST00000011526 5323 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Tram1Q91V04 Epb41-204ENSMUST00000105970 5059 ntAPPRIS ALT2 TSL 5 BASIC9.39□□□□□ -0.91
Tram1Q91V04 Gm364-201ENSMUST00000114725 2156 ntAPPRIS P1 TSL 2 BASIC9.39□□□□□ -0.91
Tram1Q91V04 Zcchc12-202ENSMUST00000115256 2197 ntAPPRIS P1 TSL 2 BASIC9.39□□□□□ -0.91
Tram1Q91V04 Ly6e-202ENSMUST00000169343 2154 ntAPPRIS P1 TSL 5 BASIC9.39□□□□□ -0.91
Tram1Q91V04 Gm37264-201ENSMUST00000194916 2192 ntBASIC9.39□□□□□ -0.91
Tram1Q91V04 AC115746.1-201ENSMUST00000228949 3617 ntBASIC9.39□□□□□ -0.91
Tram1Q91V04 Myo18a-201ENSMUST00000000645 7307 ntAPPRIS ALT2 TSL 5 BASIC9.39□□□□□ -0.91
Tram1Q91V04 2310065F04Rik-201ENSMUST00000125538 2724 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
Tram1Q91V04 Ccdc136-202ENSMUST00000115275 3279 ntAPPRIS ALT2 TSL 5 BASIC9.39□□□□□ -0.91
Tram1Q91V04 Unc50-202ENSMUST00000114925 1094 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Tram1Q91V04 Gm12857-201ENSMUST00000117678 592 ntBASIC9.39□□□□□ -0.91
Tram1Q91V04 Gm14740-201ENSMUST00000118538 1150 ntBASIC9.39□□□□□ -0.91
Tram1Q91V04 Rpl19-ps1-201ENSMUST00000121059 591 ntBASIC9.39□□□□□ -0.91
Tram1Q91V04 4930589P08Rik-201ENSMUST00000129097 1084 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
Tram1Q91V04 4930471C04Rik-201ENSMUST00000166038 865 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
Tram1Q91V04 1110059E24Rik-208ENSMUST00000179768 962 ntAPPRIS ALT2 TSL 2 BASIC9.39□□□□□ -0.91
Tram1Q91V04 Gm29346-201ENSMUST00000188147 255 ntTSL 3 BASIC9.39□□□□□ -0.91
Tram1Q91V04 Rassf4-202ENSMUST00000203029 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC9.39□□□□□ -0.91
Tram1Q91V04 Polr2h-201ENSMUST00000021405 950 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Tram1Q91V04 AC132384.14-201ENSMUST00000219346 1147 ntBASIC9.39□□□□□ -0.91
Tram1Q91V04 Gm270-201ENSMUST00000223010 976 ntBASIC9.39□□□□□ -0.91
Tram1Q91V04 CT485787.1-201ENSMUST00000225617 968 ntBASIC9.39□□□□□ -0.91
Tram1Q91V04 Tmem54-202ENSMUST00000030577 988 ntAPPRIS ALT2 TSL 3 BASIC9.39□□□□□ -0.91
Tram1Q91V04 Scgb2b2-201ENSMUST00000038835 520 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Tram1Q91V04 Pvalb-201ENSMUST00000005860 977 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Tram1Q91V04 Olfr553-201ENSMUST00000098222 981 ntAPPRIS P1 BASIC9.39□□□□□ -0.91
Tram1Q91V04 Ilf3-201ENSMUST00000067646 3549 ntAPPRIS P4 TSL 1 (best) BASIC9.39□□□□□ -0.91
Tram1Q91V04 Katnal2-208ENSMUST00000137498 1824 ntTSL 5 BASIC9.39□□□□□ -0.91
Tram1Q91V04 Lipg-201ENSMUST00000066532 3787 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Tram1Q91V04 Med12l-206ENSMUST00000199659 11006 ntAPPRIS P2 TSL 5 BASIC9.39□□□□□ -0.91
Tram1Q91V04 Ern2-201ENSMUST00000033153 2914 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Tram1Q91V04 Pax6-206ENSMUST00000111086 2601 ntAPPRIS P3 TSL 1 (best) BASIC9.39□□□□□ -0.91
Tram1Q91V04 Adar-205ENSMUST00000121094 2321 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
Tram1Q91V04 Bco1-201ENSMUST00000034308 2338 ntAPPRIS P3 TSL 1 (best) BASIC9.39□□□□□ -0.91
Tram1Q91V04 Col15a1-203ENSMUST00000107730 1755 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
Tram1Q91V04 Txndc16-205ENSMUST00000139526 5045 ntAPPRIS ALT2 TSL 1 (best) BASIC9.39□□□□□ -0.91
Tram1Q91V04 Gal3st2-201ENSMUST00000094663 2844 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Tram1Q91V04 Serpinc1-201ENSMUST00000064725 4970 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Tram1Q91V04 Eif2s2-201ENSMUST00000099173 2542 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Tram1Q91V04 Clic5-201ENSMUST00000024755 5870 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Tram1Q91V04 Slc5a9-201ENSMUST00000102719 2460 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Tram1Q91V04 Olfr222-202ENSMUST00000214351 2474 ntAPPRIS P1 TSL 5 BASIC9.39□□□□□ -0.91
Tram1Q91V04 Rab27a-201ENSMUST00000034722 2979 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Tram1Q91V04 Wdr60-201ENSMUST00000039349 3721 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Retrieved 100 of 76,532 protein–RNA pairs in 48.1 ms