Protein–RNA interactions for Protein: Q8CDN8

Ccdc38, Coiled-coil domain-containing protein 38, mousemouse

Predictions only

Length 563 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc38Q8CDN8 Zfp454-201ENSMUST00000050595 2059 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Ccdc38Q8CDN8 Rasal1-201ENSMUST00000031606 3212 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Ccdc38Q8CDN8 Lmo3-207ENSMUST00000163065 2425 ntTSL 3 BASIC12.25□□□□□ -0.45
Ccdc38Q8CDN8 Rims2-204ENSMUST00000226410 3685 ntBASIC12.25□□□□□ -0.45
Ccdc38Q8CDN8 Ltc4s-201ENSMUST00000101265 480 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Ccdc38Q8CDN8 Rtn2-202ENSMUST00000108468 1076 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Ccdc38Q8CDN8 Gm15726-201ENSMUST00000144738 509 ntTSL 3 BASIC12.25□□□□□ -0.45
Ccdc38Q8CDN8 Wdr53-204ENSMUST00000178573 1153 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
Ccdc38Q8CDN8 Gm28746-201ENSMUST00000187453 380 ntBASIC12.25□□□□□ -0.45
Ccdc38Q8CDN8 Gm29264-201ENSMUST00000191240 1264 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Ccdc38Q8CDN8 Gm7271-202ENSMUST00000191515 836 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
Ccdc38Q8CDN8 Gm38321-201ENSMUST00000195053 235 ntBASIC12.25□□□□□ -0.45
Ccdc38Q8CDN8 Igkv2-116-201ENSMUST00000199327 362 ntBASIC12.25□□□□□ -0.45
Ccdc38Q8CDN8 Nutf2-202ENSMUST00000212042 645 ntAPPRIS P1 TSL 3 BASIC12.25□□□□□ -0.45
Ccdc38Q8CDN8 Gm17749-201ENSMUST00000216282 690 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Ccdc38Q8CDN8 CT010506.1-201ENSMUST00000223673 349 ntBASIC12.25□□□□□ -0.45
Ccdc38Q8CDN8 AC154589.2-201ENSMUST00000228847 251 ntBASIC12.25□□□□□ -0.45
Ccdc38Q8CDN8 Apc-201ENSMUST00000066133 1185 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Ccdc38Q8CDN8 Olfr520-202ENSMUST00000220185 1330 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
Ccdc38Q8CDN8 Gm9387-201ENSMUST00000098624 1320 ntBASIC12.25□□□□□ -0.45
Ccdc38Q8CDN8 Gm28035-201ENSMUST00000139454 4238 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
Ccdc38Q8CDN8 4930488L21Rik-202ENSMUST00000212638 3164 ntTSL 5 BASIC12.25□□□□□ -0.45
Ccdc38Q8CDN8 Optc-205ENSMUST00000153617 1615 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Ccdc38Q8CDN8 Gm15883-201ENSMUST00000153562 1690 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Ccdc38Q8CDN8 Grik4-201ENSMUST00000034515 3413 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
Ccdc38Q8CDN8 Ankrd53-201ENSMUST00000014891 1739 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Ccdc38Q8CDN8 Slc4a8-204ENSMUST00000162049 3532 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Ccdc38Q8CDN8 Dll4-201ENSMUST00000102517 3747 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Ccdc38Q8CDN8 Gm42031-201ENSMUST00000209823 1885 ntTSL 5 BASIC12.25□□□□□ -0.45
Ccdc38Q8CDN8 Lama4-201ENSMUST00000019992 6046 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Ccdc38Q8CDN8 Loxl3-201ENSMUST00000000707 4098 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Ccdc38Q8CDN8 4930451G09Rik-201ENSMUST00000090457 2206 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Ccdc38Q8CDN8 Vmn2r18-201ENSMUST00000165928 2367 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
Ccdc38Q8CDN8 Abhd4-201ENSMUST00000041197 2401 ntAPPRIS P4 TSL 1 (best) BASIC12.25□□□□□ -0.45
Ccdc38Q8CDN8 Stox2-206ENSMUST00000210030 2734 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Ccdc38Q8CDN8 Wars-205ENSMUST00000161410 2764 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Ccdc38Q8CDN8 Impa1-202ENSMUST00000118410 2988 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Ccdc38Q8CDN8 Myh13-203ENSMUST00000180845 5991 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
Ccdc38Q8CDN8 Ptbp1-206ENSMUST00000165704 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Ccdc38Q8CDN8 Gm10646-201ENSMUST00000213227 3293 ntTSL 2 BASIC12.24□□□□□ -0.45
Ccdc38Q8CDN8 Zfp235-201ENSMUST00000056549 3373 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Ccdc38Q8CDN8 Pex13-201ENSMUST00000020523 4146 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Ccdc38Q8CDN8 Auts2-209ENSMUST00000161804 5392 ntAPPRIS P5 TSL 1 (best) BASIC12.24□□□□□ -0.45
Ccdc38Q8CDN8 Vipr2-201ENSMUST00000011315 3383 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Ccdc38Q8CDN8 Pstpip2-201ENSMUST00000114741 1395 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Ccdc38Q8CDN8 Gm13422-201ENSMUST00000118834 504 ntBASIC12.24□□□□□ -0.45
Ccdc38Q8CDN8 Gm15573-201ENSMUST00000119487 540 ntBASIC12.24□□□□□ -0.45
Ccdc38Q8CDN8 Tcp10a-203ENSMUST00000129709 1778 ntAPPRIS P2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Ccdc38Q8CDN8 Oprm1-230ENSMUST00000154906 2039 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Ccdc38Q8CDN8 Tbc1d22bos-201ENSMUST00000159875 826 ntTSL 3 BASIC12.24□□□□□ -0.45
Ccdc38Q8CDN8 Mybpc3-203ENSMUST00000169776 4163 ntAPPRIS P2 TSL 5 BASIC12.24□□□□□ -0.45
Ccdc38Q8CDN8 Mir5120-201ENSMUST00000175020 78 ntBASIC12.24□□□□□ -0.45
Ccdc38Q8CDN8 Gm5294-201ENSMUST00000179205 651 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
Ccdc38Q8CDN8 1810053B23Rik-205ENSMUST00000188056 1592 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Ccdc38Q8CDN8 Rab3gap2-204ENSMUST00000194740 4418 ntAPPRIS ALT2 TSL 5 BASIC12.24□□□□□ -0.45
Ccdc38Q8CDN8 Gm43817-201ENSMUST00000196459 2262 ntBASIC12.24□□□□□ -0.45
Ccdc38Q8CDN8 Gm44323-201ENSMUST00000198689 129 ntBASIC12.24□□□□□ -0.45
Ccdc38Q8CDN8 4930413E15Rik-201ENSMUST00000202500 1290 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Ccdc38Q8CDN8 Stc2-201ENSMUST00000020546 3940 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Ccdc38Q8CDN8 Wwp2-204ENSMUST00000212205 2758 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Ccdc38Q8CDN8 AC159747.1-201ENSMUST00000219903 265 ntBASIC12.24□□□□□ -0.45
Ccdc38Q8CDN8 Colec11-203ENSMUST00000220836 887 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Ccdc38Q8CDN8 Tnfrsf9-201ENSMUST00000030808 2099 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
Ccdc38Q8CDN8 Foxh1-201ENSMUST00000037824 1306 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Ccdc38Q8CDN8 Galm-201ENSMUST00000039205 2314 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Ccdc38Q8CDN8 Txlna-201ENSMUST00000046425 4569 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Ccdc38Q8CDN8 Piezo2-202ENSMUST00000047480 10724 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Ccdc38Q8CDN8 Ypel4-201ENSMUST00000090729 1676 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Ccdc38Q8CDN8 Vti1a-201ENSMUST00000095950 3405 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Ccdc38Q8CDN8 Snx13-202ENSMUST00000163677 3681 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Ccdc38Q8CDN8 Filip1l-202ENSMUST00000159414 3253 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Ccdc38Q8CDN8 Tnip1-203ENSMUST00000102731 2973 ntAPPRIS P3 TSL 5 BASIC12.24□□□□□ -0.45
Ccdc38Q8CDN8 Itgb2-201ENSMUST00000000299 2970 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Ccdc38Q8CDN8 Lpo-201ENSMUST00000103177 2926 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Ccdc38Q8CDN8 Robo1-201ENSMUST00000023600 7563 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Ccdc38Q8CDN8 Snw1-201ENSMUST00000021428 2232 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Ccdc38Q8CDN8 Gm16169-202ENSMUST00000162432 2128 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Ccdc38Q8CDN8 Rad1-202ENSMUST00000100775 4085 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Ccdc38Q8CDN8 D630003M21Rik-201ENSMUST00000046944 3910 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
Ccdc38Q8CDN8 E2f8-201ENSMUST00000058745 3691 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Ccdc38Q8CDN8 Psmc2-201ENSMUST00000030769 1785 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Ccdc38Q8CDN8 Ptp4a3-203ENSMUST00000165541 3539 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
Ccdc38Q8CDN8 Bcat2-208ENSMUST00000211173 1684 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Ccdc38Q8CDN8 Oc90-202ENSMUST00000079776 1670 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Ccdc38Q8CDN8 Cdh15-201ENSMUST00000034443 3251 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Ccdc38Q8CDN8 Shc1-210ENSMUST00000191485 3154 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
Ccdc38Q8CDN8 4930555B11Rik-201ENSMUST00000123210 1533 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Ccdc38Q8CDN8 Enpp4-201ENSMUST00000024757 4560 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Ccdc38Q8CDN8 Bsnd-201ENSMUST00000054472 2756 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Ccdc38Q8CDN8 Csnk1a1-204ENSMUST00000165123 4083 ntAPPRIS P2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Ccdc38Q8CDN8 Ikbkb-202ENSMUST00000063401 3977 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Ccdc38Q8CDN8 Tmc5-203ENSMUST00000121715 3906 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Ccdc38Q8CDN8 Cdc42se1-204ENSMUST00000107201 907 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Ccdc38Q8CDN8 Csmd2os-202ENSMUST00000179945 643 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Ccdc38Q8CDN8 Mir6546-201ENSMUST00000184460 62 ntBASIC12.23□□□□□ -0.45
Ccdc38Q8CDN8 2010010A06Rik-201ENSMUST00000185628 258 ntBASIC12.23□□□□□ -0.45
Ccdc38Q8CDN8 Platr10-202ENSMUST00000191479 818 ntBASIC12.23□□□□□ -0.45
Ccdc38Q8CDN8 Gm37458-201ENSMUST00000194055 410 ntBASIC12.23□□□□□ -0.45
Ccdc38Q8CDN8 Gm37826-201ENSMUST00000195329 322 ntBASIC12.23□□□□□ -0.45
Ccdc38Q8CDN8 Gm4959-201ENSMUST00000197271 1044 ntBASIC12.23□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 73 ms