Protein–RNA interactions for Protein: Q8CCH2

Nhlrc3, NHL repeat-containing protein 3, mousemouse

Predictions only

Length 347 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nhlrc3Q8CCH2 Synpo2l-201ENSMUST00000057090 4394 ntTSL 1 (best) BASIC9.26□□□□□ -0.93
Nhlrc3Q8CCH2 Ass1-201ENSMUST00000102840 1696 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
Nhlrc3Q8CCH2 Htr2c-202ENSMUST00000096299 4883 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
Nhlrc3Q8CCH2 Htr1b-202ENSMUST00000183482 4724 ntAPPRIS P1 TSL 3 BASIC9.26□□□□□ -0.93
Nhlrc3Q8CCH2 4833422M21Rik-203ENSMUST00000181747 1365 ntTSL 1 (best) BASIC9.26□□□□□ -0.93
Nhlrc3Q8CCH2 Zfp606-202ENSMUST00000123589 3509 ntTSL 1 (best) BASIC9.26□□□□□ -0.93
Nhlrc3Q8CCH2 Pop1-201ENSMUST00000052290 3395 ntAPPRIS P4 TSL 1 (best) BASIC9.26□□□□□ -0.93
Nhlrc3Q8CCH2 Srrm4-202ENSMUST00000139425 2798 ntTSL 1 (best) BASIC9.26□□□□□ -0.93
Nhlrc3Q8CCH2 Scamp1-203ENSMUST00000152555 1877 ntTSL 1 (best) BASIC9.26□□□□□ -0.93
Nhlrc3Q8CCH2 Hyal2-206ENSMUST00000195681 2968 ntBASIC9.26□□□□□ -0.93
Nhlrc3Q8CCH2 P3h1-202ENSMUST00000081606 2820 ntAPPRIS ALT2 TSL 1 (best) BASIC9.26□□□□□ -0.93
Nhlrc3Q8CCH2 Dnmbp-206ENSMUST00000212592 3901 ntTSL 1 (best) BASIC9.26□□□□□ -0.93
Nhlrc3Q8CCH2 Zmynd11-206ENSMUST00000110637 3770 ntTSL 5 BASIC9.26□□□□□ -0.93
Nhlrc3Q8CCH2 Akap12-201ENSMUST00000045730 6195 ntAPPRIS P2 TSL 1 (best) BASIC9.26□□□□□ -0.93
Nhlrc3Q8CCH2 Slc7a3-202ENSMUST00000101362 2371 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
Nhlrc3Q8CCH2 Gm14058-201ENSMUST00000116082 735 ntBASIC9.26□□□□□ -0.93
Nhlrc3Q8CCH2 Gm16481-201ENSMUST00000119074 1227 ntBASIC9.26□□□□□ -0.93
Nhlrc3Q8CCH2 Cfap100-204ENSMUST00000134224 849 ntTSL 1 (best) BASIC9.26□□□□□ -0.93
Nhlrc3Q8CCH2 C230038L03Rik-202ENSMUST00000136294 1197 ntTSL 2 BASIC9.26□□□□□ -0.93
Nhlrc3Q8CCH2 F630206G17Rik-201ENSMUST00000137002 685 ntTSL 1 (best) BASIC9.26□□□□□ -0.93
Nhlrc3Q8CCH2 Gm15738-202ENSMUST00000140892 427 ntTSL 2 BASIC9.26□□□□□ -0.93
Nhlrc3Q8CCH2 Gm3948-201ENSMUST00000147795 421 ntTSL 3 BASIC9.26□□□□□ -0.93
Nhlrc3Q8CCH2 Gm14249-201ENSMUST00000156239 1017 ntTSL 5 BASIC9.26□□□□□ -0.93
Nhlrc3Q8CCH2 Mir1938-201ENSMUST00000158746 100 ntBASIC9.26□□□□□ -0.93
Nhlrc3Q8CCH2 U2af1l4-234ENSMUST00000171850 564 ntTSL 5 BASIC9.26□□□□□ -0.93
Nhlrc3Q8CCH2 Gm23694-201ENSMUST00000179335 110 ntBASIC9.26□□□□□ -0.93
Nhlrc3Q8CCH2 Dynlt1b-201ENSMUST00000179569 768 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
Nhlrc3Q8CCH2 Gm27552-201ENSMUST00000183351 62 ntBASIC9.26□□□□□ -0.93
Nhlrc3Q8CCH2 Gm27844-201ENSMUST00000183613 62 ntBASIC9.26□□□□□ -0.93
Nhlrc3Q8CCH2 Gm28746-201ENSMUST00000187453 380 ntBASIC9.26□□□□□ -0.93
Nhlrc3Q8CCH2 AU022133-201ENSMUST00000200601 873 ntBASIC9.26□□□□□ -0.93
Nhlrc3Q8CCH2 Gm42800-201ENSMUST00000202494 733 ntTSL 5 BASIC9.26□□□□□ -0.93
Nhlrc3Q8CCH2 Gng8-204ENSMUST00000205716 432 ntAPPRIS P1 TSL 3 BASIC9.26□□□□□ -0.93
Nhlrc3Q8CCH2 Gm32111-201ENSMUST00000207689 846 ntBASIC9.26□□□□□ -0.93
Nhlrc3Q8CCH2 Gm45909-201ENSMUST00000212413 1031 ntBASIC9.26□□□□□ -0.93
Nhlrc3Q8CCH2 Gm34973-201ENSMUST00000217087 572 ntTSL 3 BASIC9.26□□□□□ -0.93
Nhlrc3Q8CCH2 CT009713.8-201ENSMUST00000225448 560 ntBASIC9.26□□□□□ -0.93
Nhlrc3Q8CCH2 Scgb3a2-201ENSMUST00000043803 842 ntTSL 1 (best) BASIC9.26□□□□□ -0.93
Nhlrc3Q8CCH2 Wfdc21-201ENSMUST00000070832 434 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
Nhlrc3Q8CCH2 Olfr887-201ENSMUST00000074681 930 ntAPPRIS P1 BASIC9.26□□□□□ -0.93
Nhlrc3Q8CCH2 Mrpl18-201ENSMUST00000079121 1219 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
Nhlrc3Q8CCH2 Gm25125-201ENSMUST00000083340 136 ntBASIC9.26□□□□□ -0.93
Nhlrc3Q8CCH2 Iqcf1-201ENSMUST00000085114 613 ntAPPRIS P4 TSL 1 (best) BASIC9.26□□□□□ -0.93
Nhlrc3Q8CCH2 Msrb3-201ENSMUST00000092143 3843 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
Nhlrc3Q8CCH2 Olfr584-201ENSMUST00000098210 964 ntBASIC9.26□□□□□ -0.93
Nhlrc3Q8CCH2 Eif3d-201ENSMUST00000100484 1910 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
Nhlrc3Q8CCH2 Gm30228-201ENSMUST00000218501 1949 ntTSL 3 BASIC9.26□□□□□ -0.93
Nhlrc3Q8CCH2 Fam114a2-201ENSMUST00000020831 2557 ntAPPRIS P3 TSL 1 (best) BASIC9.26□□□□□ -0.93
Nhlrc3Q8CCH2 Ltbp2-201ENSMUST00000002073 6769 ntAPPRIS ALT2 TSL 5 BASIC9.26□□□□□ -0.93
Nhlrc3Q8CCH2 Dnmt3a-218ENSMUST00000174817 8737 ntAPPRIS ALT2 TSL 1 (best) BASIC9.26□□□□□ -0.93
Nhlrc3Q8CCH2 Fnbp1l-201ENSMUST00000162409 5198 ntTSL 5 BASIC9.26□□□□□ -0.93
Nhlrc3Q8CCH2 Ddr1-202ENSMUST00000097333 3593 ntAPPRIS ALT2 TSL 1 (best) BASIC9.26□□□□□ -0.93
Nhlrc3Q8CCH2 Syncrip-208ENSMUST00000174282 3404 ntAPPRIS ALT1 TSL 1 (best) BASIC9.26□□□□□ -0.93
Nhlrc3Q8CCH2 Unkl-202ENSMUST00000039734 4779 ntAPPRIS P1 TSL 5 BASIC9.26□□□□□ -0.93
Nhlrc3Q8CCH2 Zp3-201ENSMUST00000005073 1323 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
Nhlrc3Q8CCH2 8430408G22Rik-201ENSMUST00000067354 1339 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
Nhlrc3Q8CCH2 Henmt1-203ENSMUST00000106586 1838 ntAPPRIS P2 TSL 1 (best) BASIC9.26□□□□□ -0.93
Nhlrc3Q8CCH2 1700036A12Rik-202ENSMUST00000190053 1828 ntTSL 1 (best) BASIC9.26□□□□□ -0.93
Nhlrc3Q8CCH2 Hmgb1-201ENSMUST00000085546 2838 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
Nhlrc3Q8CCH2 Man2c1-211ENSMUST00000160147 3820 ntAPPRIS P2 TSL 1 (best) BASIC9.26□□□□□ -0.93
Nhlrc3Q8CCH2 B3galt5-201ENSMUST00000099497 5147 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
Nhlrc3Q8CCH2 Nanog-201ENSMUST00000012540 2211 ntAPPRIS P3 TSL 1 (best) BASIC9.25□□□□□ -0.93
Nhlrc3Q8CCH2 Catsper1-201ENSMUST00000043380 2061 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
Nhlrc3Q8CCH2 Anapc15-213ENSMUST00000178851 2797 ntTSL 2 BASIC9.25□□□□□ -0.93
Nhlrc3Q8CCH2 Snhg17-203ENSMUST00000141809 1553 ntTSL 1 (best) BASIC9.25□□□□□ -0.93
Nhlrc3Q8CCH2 Tubb5-201ENSMUST00000001566 2649 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
Nhlrc3Q8CCH2 Pik3r5-201ENSMUST00000021283 4370 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
Nhlrc3Q8CCH2 AC108416.1-201ENSMUST00000228755 1558 ntBASIC9.25□□□□□ -0.93
Nhlrc3Q8CCH2 Hcar2-201ENSMUST00000057145 1930 ntAPPRIS P1 BASIC9.25□□□□□ -0.93
Nhlrc3Q8CCH2 Edil3-202ENSMUST00000081769 5317 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
Nhlrc3Q8CCH2 Mta1-202ENSMUST00000069690 2697 ntAPPRIS ALT2 TSL 5 BASIC9.25□□□□□ -0.93
Nhlrc3Q8CCH2 Apobec3-204ENSMUST00000175714 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC9.25□□□□□ -0.93
Nhlrc3Q8CCH2 Sgsm1-202ENSMUST00000057209 4339 ntTSL 1 (best) BASIC9.25□□□□□ -0.93
Nhlrc3Q8CCH2 Adck1-201ENSMUST00000101165 2158 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
Nhlrc3Q8CCH2 Gm26862-201ENSMUST00000181886 2191 ntTSL 1 (best) BASIC9.25□□□□□ -0.93
Nhlrc3Q8CCH2 Cyp7b1-201ENSMUST00000035625 2166 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
Nhlrc3Q8CCH2 Ralgps1-202ENSMUST00000091039 2738 ntTSL 1 (best) BASIC9.25□□□□□ -0.93
Nhlrc3Q8CCH2 Gm5795-201ENSMUST00000100920 984 ntAPPRIS P2 TSL 5 BASIC9.25□□□□□ -0.93
Nhlrc3Q8CCH2 Ypel3-202ENSMUST00000106356 785 ntAPPRIS P1 TSL 5 BASIC9.25□□□□□ -0.93
Nhlrc3Q8CCH2 Gm11941-201ENSMUST00000119904 610 ntBASIC9.25□□□□□ -0.93
Nhlrc3Q8CCH2 Gm11450-201ENSMUST00000121144 333 ntBASIC9.25□□□□□ -0.93
Nhlrc3Q8CCH2 Gm9089-201ENSMUST00000122027 526 ntBASIC9.25□□□□□ -0.93
Nhlrc3Q8CCH2 Spx-202ENSMUST00000126521 357 ntAPPRIS P2 TSL 5 BASIC9.25□□□□□ -0.93
Nhlrc3Q8CCH2 Gm11642-201ENSMUST00000150442 440 ntTSL 5 BASIC9.25□□□□□ -0.93
Nhlrc3Q8CCH2 Gm3685-201ENSMUST00000169215 984 ntAPPRIS P5 TSL 5 BASIC9.25□□□□□ -0.93
Nhlrc3Q8CCH2 Gm9639-201ENSMUST00000172205 678 ntAPPRIS P1 BASIC9.25□□□□□ -0.93
Nhlrc3Q8CCH2 Gstt3-203ENSMUST00000173537 687 ntTSL 3 BASIC9.25□□□□□ -0.93
Nhlrc3Q8CCH2 Mir99ahg-209ENSMUST00000182820 835 ntTSL 1 (best) BASIC9.25□□□□□ -0.93
Nhlrc3Q8CCH2 Gm28032-201ENSMUST00000184104 96 ntBASIC9.25□□□□□ -0.93
Nhlrc3Q8CCH2 Gm37284-201ENSMUST00000193607 539 ntBASIC9.25□□□□□ -0.93
Nhlrc3Q8CCH2 Gm37707-201ENSMUST00000195309 325 ntTSL 3 BASIC9.25□□□□□ -0.93
Nhlrc3Q8CCH2 Gstp-ps-201ENSMUST00000195526 631 ntBASIC9.25□□□□□ -0.93
Nhlrc3Q8CCH2 Gm43186-201ENSMUST00000198130 824 ntBASIC9.25□□□□□ -0.93
Nhlrc3Q8CCH2 Rad51d-202ENSMUST00000021033 1201 ntTSL 1 (best) BASIC9.25□□□□□ -0.93
Nhlrc3Q8CCH2 Gm18212-201ENSMUST00000211678 889 ntBASIC9.25□□□□□ -0.93
Nhlrc3Q8CCH2 Gm2517-201ENSMUST00000215651 348 ntBASIC9.25□□□□□ -0.93
Nhlrc3Q8CCH2 Gm9111-201ENSMUST00000219394 709 ntBASIC9.25□□□□□ -0.93
Nhlrc3Q8CCH2 Kcnk7-201ENSMUST00000052448 1226 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
Nhlrc3Q8CCH2 Agrp-201ENSMUST00000005849 661 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
Nhlrc3Q8CCH2 Hist1h1b-201ENSMUST00000080511 743 ntAPPRIS P1 BASIC9.25□□□□□ -0.93
Retrieved 100 of 76,532 protein–RNA pairs in 99 ms