Protein–RNA interactions for Protein: Q8CCB4

Vps53, Vacuolar protein sorting-associated protein 53 homolog, mousemouse

Predictions only

Length 832 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps53Q8CCB4 Gm15411-201ENSMUST00000133243 3488 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Vps53Q8CCB4 Dhx34-201ENSMUST00000094816 4073 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Vps53Q8CCB4 Tle6-210ENSMUST00000142948 1961 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Vps53Q8CCB4 Eya1-209ENSMUST00000190337 2199 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Vps53Q8CCB4 Ldb2-204ENSMUST00000199256 2596 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Vps53Q8CCB4 Poldip3-202ENSMUST00000100375 3157 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Vps53Q8CCB4 Olfr77-202ENSMUST00000217347 5980 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
Vps53Q8CCB4 Pxdn-208ENSMUST00000220271 6377 ntTSL 5 BASIC12.81□□□□□ -0.36
Vps53Q8CCB4 Chil1-207ENSMUST00000153856 1839 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Vps53Q8CCB4 Dlec1-208ENSMUST00000165231 5263 ntAPPRIS P2 TSL 5 BASIC12.81□□□□□ -0.36
Vps53Q8CCB4 Pigu-205ENSMUST00000165234 1626 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
Vps53Q8CCB4 Gm26794-201ENSMUST00000180810 4312 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Vps53Q8CCB4 Qsox1-201ENSMUST00000035325 3348 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
Vps53Q8CCB4 Gm21358-201ENSMUST00000191645 1659 ntBASIC12.81□□□□□ -0.36
Vps53Q8CCB4 Gm9035-201ENSMUST00000218318 1697 ntBASIC12.81□□□□□ -0.36
Vps53Q8CCB4 Lima1-201ENSMUST00000073691 4215 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Vps53Q8CCB4 Srd5a3-202ENSMUST00000113506 1241 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
Vps53Q8CCB4 Gm12274-201ENSMUST00000120062 385 ntBASIC12.81□□□□□ -0.36
Vps53Q8CCB4 Gm5257-201ENSMUST00000121823 790 ntBASIC12.81□□□□□ -0.36
Vps53Q8CCB4 Gm14397-201ENSMUST00000124728 576 ntTSL 3 BASIC12.81□□□□□ -0.36
Vps53Q8CCB4 Gm16341-201ENSMUST00000126385 377 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Vps53Q8CCB4 BB557941-201ENSMUST00000126549 1097 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Vps53Q8CCB4 Gm13267-201ENSMUST00000142787 698 ntTSL 3 BASIC12.81□□□□□ -0.36
Vps53Q8CCB4 Gm22146-201ENSMUST00000157397 288 ntBASIC12.81□□□□□ -0.36
Vps53Q8CCB4 Olfml3-204ENSMUST00000169286 874 ntBASIC12.81□□□□□ -0.36
Vps53Q8CCB4 Clec7a-202ENSMUST00000184581 707 ntAPPRIS P2 TSL 3 BASIC12.81□□□□□ -0.36
Vps53Q8CCB4 Gm18561-201ENSMUST00000206027 804 ntBASIC12.81□□□□□ -0.36
Vps53Q8CCB4 Gm8436-201ENSMUST00000210152 1080 ntBASIC12.81□□□□□ -0.36
Vps53Q8CCB4 Gm5749-201ENSMUST00000210673 1090 ntBASIC12.81□□□□□ -0.36
Vps53Q8CCB4 Gm4065-202ENSMUST00000218911 986 ntTSL 3 BASIC12.81□□□□□ -0.36
Vps53Q8CCB4 AC154572.1-201ENSMUST00000226098 1204 ntBASIC12.81□□□□□ -0.36
Vps53Q8CCB4 Ppp2r1b-201ENSMUST00000034560 3647 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Vps53Q8CCB4 Ccnk-202ENSMUST00000221167 2789 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Vps53Q8CCB4 Cmya5-201ENSMUST00000062122 11850 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Vps53Q8CCB4 Ern1-201ENSMUST00000001059 6946 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Vps53Q8CCB4 Odf2l-204ENSMUST00000106192 2425 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
Vps53Q8CCB4 Ndufaf1-203ENSMUST00000110802 1308 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Vps53Q8CCB4 Cfap161-201ENSMUST00000011298 1335 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Vps53Q8CCB4 Slc45a3-201ENSMUST00000027695 3340 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Vps53Q8CCB4 CT010462.1-202ENSMUST00000222225 2225 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Vps53Q8CCB4 Trmt12-201ENSMUST00000036937 4454 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
Vps53Q8CCB4 Crispld2-202ENSMUST00000108972 2928 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
Vps53Q8CCB4 Tcn2-207ENSMUST00000109993 2027 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Vps53Q8CCB4 Glyctk-202ENSMUST00000112543 4081 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Vps53Q8CCB4 Gfm1-201ENSMUST00000077271 4078 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Vps53Q8CCB4 Nfx1-202ENSMUST00000091614 3617 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Vps53Q8CCB4 Ablim1-210ENSMUST00000111550 2731 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
Vps53Q8CCB4 Lsamp-206ENSMUST00000187695 3411 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Vps53Q8CCB4 Ptprr-206ENSMUST00000148731 2511 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
Vps53Q8CCB4 Atp11c-202ENSMUST00000101527 6044 ntAPPRIS P4 TSL 1 (best) BASIC12.81□□□□□ -0.36
Vps53Q8CCB4 Nxf2-202ENSMUST00000113187 2316 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Vps53Q8CCB4 Rnf220-201ENSMUST00000030439 3029 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
Vps53Q8CCB4 Drc7-201ENSMUST00000058479 2832 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Vps53Q8CCB4 Wnk1-204ENSMUST00000088646 8364 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Vps53Q8CCB4 Slc10a3-203ENSMUST00000114146 1902 ntAPPRIS P2 TSL 5 BASIC12.8□□□□□ -0.36
Vps53Q8CCB4 Scyl2-204ENSMUST00000174252 4817 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
Vps53Q8CCB4 Tmem109-201ENSMUST00000038128 2188 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Vps53Q8CCB4 Hspa5-201ENSMUST00000028222 3672 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Vps53Q8CCB4 Plscr1-202ENSMUST00000186364 1471 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Vps53Q8CCB4 Cars-202ENSMUST00000105909 2462 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Vps53Q8CCB4 5031434O11Rik-201ENSMUST00000180404 3731 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Vps53Q8CCB4 Oplah-201ENSMUST00000023222 3970 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Vps53Q8CCB4 Gtf2a1-202ENSMUST00000063314 2265 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Vps53Q8CCB4 Gm24791-201ENSMUST00000104284 131 ntBASIC12.8□□□□□ -0.36
Vps53Q8CCB4 Rhox3c-202ENSMUST00000115189 648 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
Vps53Q8CCB4 Gm15617-201ENSMUST00000118973 771 ntBASIC12.8□□□□□ -0.36
Vps53Q8CCB4 Gm15374-201ENSMUST00000119313 844 ntBASIC12.8□□□□□ -0.36
Vps53Q8CCB4 Vmn1r-ps104-201ENSMUST00000120960 771 ntBASIC12.8□□□□□ -0.36
Vps53Q8CCB4 Cideb-201ENSMUST00000001497 1212 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Vps53Q8CCB4 Tro-208ENSMUST00000164071 891 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
Vps53Q8CCB4 Gm8451-201ENSMUST00000170338 447 ntBASIC12.8□□□□□ -0.36
Vps53Q8CCB4 Rhox3a2-204ENSMUST00000184565 823 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
Vps53Q8CCB4 Gm7271-202ENSMUST00000191515 836 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
Vps53Q8CCB4 Gm43695-201ENSMUST00000196545 196 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Vps53Q8CCB4 2010109P13Rik-201ENSMUST00000204605 392 ntBASIC12.8□□□□□ -0.36
Vps53Q8CCB4 Klk1b19-ps-201ENSMUST00000205322 696 ntBASIC12.8□□□□□ -0.36
Vps53Q8CCB4 Gm18460-201ENSMUST00000208088 464 ntBASIC12.8□□□□□ -0.36
Vps53Q8CCB4 Gm18514-201ENSMUST00000218980 436 ntBASIC12.8□□□□□ -0.36
Vps53Q8CCB4 Mitd1-201ENSMUST00000027257 1231 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Vps53Q8CCB4 Gm7536-201ENSMUST00000077389 444 ntBASIC12.8□□□□□ -0.36
Vps53Q8CCB4 Gm5453-201ENSMUST00000080866 447 ntBASIC12.8□□□□□ -0.36
Vps53Q8CCB4 Rhox3e-201ENSMUST00000081327 648 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
Vps53Q8CCB4 Rhox3a2-201ENSMUST00000096459 828 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Vps53Q8CCB4 Olfr1230-201ENSMUST00000099787 918 ntAPPRIS P1 BASIC12.8□□□□□ -0.36
Vps53Q8CCB4 Tmem129-201ENSMUST00000019439 2828 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Vps53Q8CCB4 Snhg17-203ENSMUST00000141809 1553 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Vps53Q8CCB4 4833420G17Rik-204ENSMUST00000225186 2627 ntAPPRIS P1 BASIC12.8□□□□□ -0.36
Vps53Q8CCB4 Tmem138-201ENSMUST00000025568 1590 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Vps53Q8CCB4 Foxp1-201ENSMUST00000074346 2118 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Vps53Q8CCB4 Spata2-201ENSMUST00000057627 4012 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Vps53Q8CCB4 Pls3-201ENSMUST00000033547 3242 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Vps53Q8CCB4 Cpa5-201ENSMUST00000062758 2187 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Vps53Q8CCB4 Sult1a1-201ENSMUST00000106371 1370 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Vps53Q8CCB4 Sult1a1-202ENSMUST00000106372 1369 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Vps53Q8CCB4 EU599041-202ENSMUST00000205291 1386 ntTSL 5 BASIC12.8□□□□□ -0.36
Vps53Q8CCB4 Cldn12-201ENSMUST00000060947 3597 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Vps53Q8CCB4 Avpr2-202ENSMUST00000101470 2787 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Vps53Q8CCB4 Aoc2-201ENSMUST00000041095 2543 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Vps53Q8CCB4 Mbd1-202ENSMUST00000224047 2838 ntAPPRIS P1 BASIC12.8□□□□□ -0.36
Vps53Q8CCB4 Rin1-208ENSMUST00000225427 4503 ntAPPRIS P2 BASIC12.8□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 44.9 ms