Protein–RNA interactions for Protein: Q7TSG2

Ctdp1, RNA polymerase II subunit A C-terminal domain phosphatase, mousemouse

Predictions only

Length 960 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ctdp1Q7TSG2 Pcdh20-202ENSMUST00000192557 3362 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Ctdp1Q7TSG2 Smarca2-201ENSMUST00000025862 5921 ntAPPRIS P2 TSL 5 BASIC11.96□□□□□ -0.49
Ctdp1Q7TSG2 Inca1-202ENSMUST00000108541 1150 ntAPPRIS P3 TSL 1 (best) BASIC11.96□□□□□ -0.49
Ctdp1Q7TSG2 Gsg1-202ENSMUST00000111909 1087 ntAPPRIS ALT2 TSL 5 BASIC11.96□□□□□ -0.49
Ctdp1Q7TSG2 Tpm1-210ENSMUST00000113693 1054 ntTSL 5 BASIC11.96□□□□□ -0.49
Ctdp1Q7TSG2 Gm13461-201ENSMUST00000120980 662 ntBASIC11.96□□□□□ -0.49
Ctdp1Q7TSG2 Gm8199-201ENSMUST00000121323 823 ntBASIC11.96□□□□□ -0.49
Ctdp1Q7TSG2 Inca1-205ENSMUST00000126114 1189 ntAPPRIS P3 TSL 1 (best) BASIC11.96□□□□□ -0.49
Ctdp1Q7TSG2 Gm22846-201ENSMUST00000157706 270 ntBASIC11.96□□□□□ -0.49
Ctdp1Q7TSG2 Fhit-204ENSMUST00000161302 860 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Ctdp1Q7TSG2 Rpl31-202ENSMUST00000178079 487 ntAPPRIS P1 TSL 2 BASIC11.96□□□□□ -0.49
Ctdp1Q7TSG2 Gm19705-203ENSMUST00000181491 678 ntTSL 5 BASIC11.96□□□□□ -0.49
Ctdp1Q7TSG2 Gm27184-201ENSMUST00000185095 607 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Ctdp1Q7TSG2 Gm28375-201ENSMUST00000185304 430 ntTSL 3 BASIC11.96□□□□□ -0.49
Ctdp1Q7TSG2 Gm42682-201ENSMUST00000198349 1265 ntBASIC11.96□□□□□ -0.49
Ctdp1Q7TSG2 Gm21221-201ENSMUST00000202876 1073 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Ctdp1Q7TSG2 Gm35060-201ENSMUST00000207669 825 ntAPPRIS P1 TSL 5 BASIC11.96□□□□□ -0.49
Ctdp1Q7TSG2 Gm45909-201ENSMUST00000212413 1031 ntBASIC11.96□□□□□ -0.49
Ctdp1Q7TSG2 Cct2-206ENSMUST00000219573 637 ntTSL 3 BASIC11.96□□□□□ -0.49
Ctdp1Q7TSG2 AC154680.1-201ENSMUST00000224376 859 ntBASIC11.96□□□□□ -0.49
Ctdp1Q7TSG2 AC159002.1-201ENSMUST00000226714 924 ntBASIC11.96□□□□□ -0.49
Ctdp1Q7TSG2 Gm1821-202ENSMUST00000227415 750 ntBASIC11.96□□□□□ -0.49
Ctdp1Q7TSG2 Immp1l-201ENSMUST00000037499 955 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Ctdp1Q7TSG2 Inca1-201ENSMUST00000073625 1218 ntAPPRIS P3 TSL 1 (best) BASIC11.96□□□□□ -0.49
Ctdp1Q7TSG2 Fn1-203ENSMUST00000186129 7797 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.49
Ctdp1Q7TSG2 Neu2-207ENSMUST00000172222 1715 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.49
Ctdp1Q7TSG2 Myo9a-203ENSMUST00000128341 11985 ntAPPRIS ALT2 TSL 5 BASIC11.96□□□□□ -0.5
Ctdp1Q7TSG2 Gm15271-201ENSMUST00000134627 2110 ntTSL 5 BASIC11.96□□□□□ -0.5
Ctdp1Q7TSG2 Pdpk1-202ENSMUST00000102927 7161 ntAPPRIS P3 TSL 1 (best) BASIC11.96□□□□□ -0.5
Ctdp1Q7TSG2 Ankrd52-201ENSMUST00000014642 6620 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Ctdp1Q7TSG2 Disp1-201ENSMUST00000003035 4984 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Ctdp1Q7TSG2 A930007I19Rik-201ENSMUST00000180737 2319 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Ctdp1Q7TSG2 Galm-201ENSMUST00000039205 2314 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Ctdp1Q7TSG2 Dlec1-208ENSMUST00000165231 5263 ntAPPRIS P2 TSL 5 BASIC11.95□□□□□ -0.5
Ctdp1Q7TSG2 Kyat1-201ENSMUST00000044038 1876 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Ctdp1Q7TSG2 Cd79b-201ENSMUST00000044228 1431 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Ctdp1Q7TSG2 Mybpc3-201ENSMUST00000111430 4154 ntAPPRIS ALT2 TSL 5 BASIC11.95□□□□□ -0.5
Ctdp1Q7TSG2 Tcp10a-202ENSMUST00000128533 2589 ntAPPRIS P2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Ctdp1Q7TSG2 Gm6124-201ENSMUST00000188240 2580 ntBASIC11.95□□□□□ -0.5
Ctdp1Q7TSG2 Reps1-210ENSMUST00000164556 2537 ntAPPRIS ALT1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Ctdp1Q7TSG2 Cln3-204ENSMUST00000116269 2487 ntAPPRIS P2 TSL 5 BASIC11.95□□□□□ -0.5
Ctdp1Q7TSG2 Nrp1-201ENSMUST00000026917 3597 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Ctdp1Q7TSG2 AW549877-201ENSMUST00000046633 5076 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Ctdp1Q7TSG2 1700030K09Rik-202ENSMUST00000121902 2373 ntAPPRIS ALT2 TSL 5 BASIC11.95□□□□□ -0.5
Ctdp1Q7TSG2 Pmp22-203ENSMUST00000108701 723 ntAPPRIS P1 TSL 3 BASIC11.95□□□□□ -0.5
Ctdp1Q7TSG2 Gm13809-201ENSMUST00000117921 597 ntBASIC11.95□□□□□ -0.5
Ctdp1Q7TSG2 Rps19-ps9-201ENSMUST00000161787 414 ntBASIC11.95□□□□□ -0.5
Ctdp1Q7TSG2 Gm21057-202ENSMUST00000206111 512 ntTSL 2 BASIC11.95□□□□□ -0.5
Ctdp1Q7TSG2 Olfr368-202ENSMUST00000217299 1200 ntAPPRIS P1 TSL 5 BASIC11.95□□□□□ -0.5
Ctdp1Q7TSG2 CT009718.3-201ENSMUST00000221116 367 ntBASIC11.95□□□□□ -0.5
Ctdp1Q7TSG2 Neil1-201ENSMUST00000034842 1170 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Ctdp1Q7TSG2 Rbp2-201ENSMUST00000035029 672 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Ctdp1Q7TSG2 1700001J03Rik-201ENSMUST00000073721 787 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Ctdp1Q7TSG2 Mrpl18-201ENSMUST00000079121 1219 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Ctdp1Q7TSG2 Gm45675-201ENSMUST00000211202 3429 ntBASIC11.95□□□□□ -0.5
Ctdp1Q7TSG2 Ptk2b-203ENSMUST00000111121 3365 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Ctdp1Q7TSG2 Shank2-201ENSMUST00000097929 4418 ntTSL 5 BASIC11.95□□□□□ -0.5
Ctdp1Q7TSG2 Trim6-206ENSMUST00000214578 1506 ntTSL 5 BASIC11.95□□□□□ -0.5
Ctdp1Q7TSG2 Elovl5-201ENSMUST00000034904 2782 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Ctdp1Q7TSG2 Gria4-202ENSMUST00000063508 5352 ntAPPRIS P3 TSL 1 (best) BASIC11.95□□□□□ -0.5
Ctdp1Q7TSG2 Phactr1-213ENSMUST00000148891 5307 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Ctdp1Q7TSG2 Lhx9-202ENSMUST00000046870 3645 ntAPPRIS ALT1 TSL 5 BASIC11.94□□□□□ -0.5
Ctdp1Q7TSG2 Ccdc167-203ENSMUST00000129091 2256 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Ctdp1Q7TSG2 Gm10827-201ENSMUST00000181897 2586 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Ctdp1Q7TSG2 4930488L21Rik-202ENSMUST00000212638 3164 ntTSL 5 BASIC11.94□□□□□ -0.5
Ctdp1Q7TSG2 Atxn7l3-203ENSMUST00000107134 3712 ntAPPRIS ALT1 TSL 5 BASIC11.94□□□□□ -0.5
Ctdp1Q7TSG2 Gm44103-201ENSMUST00000204364 3662 ntBASIC11.94□□□□□ -0.5
Ctdp1Q7TSG2 Iqce-201ENSMUST00000041783 6037 ntAPPRIS P3 TSL 1 (best) BASIC11.94□□□□□ -0.5
Ctdp1Q7TSG2 Unc45a-202ENSMUST00000107368 3635 ntAPPRIS P1 TSL 5 BASIC11.94□□□□□ -0.5
Ctdp1Q7TSG2 Scamp1-203ENSMUST00000152555 1877 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Ctdp1Q7TSG2 Tti2-204ENSMUST00000210129 4159 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Ctdp1Q7TSG2 Gm15513-201ENSMUST00000140646 1569 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Ctdp1Q7TSG2 Gm12165-201ENSMUST00000117047 342 ntBASIC11.94□□□□□ -0.5
Ctdp1Q7TSG2 Mup-ps29-201ENSMUST00000122281 202 ntBASIC11.94□□□□□ -0.5
Ctdp1Q7TSG2 Lyzl4os-202ENSMUST00000156364 726 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Ctdp1Q7TSG2 U2af1l4-234ENSMUST00000171850 564 ntTSL 5 BASIC11.94□□□□□ -0.5
Ctdp1Q7TSG2 Spaca6-209ENSMUST00000172097 1073 ntAPPRIS P1 TSL 5 BASIC11.94□□□□□ -0.5
Ctdp1Q7TSG2 1110038B12Rik-208ENSMUST00000174714 520 ntTSL 2 BASIC11.94□□□□□ -0.5
Ctdp1Q7TSG2 Gm19353-201ENSMUST00000184561 445 ntBASIC11.94□□□□□ -0.5
Ctdp1Q7TSG2 Mir124-2hg-207ENSMUST00000189868 535 ntTSL 2 BASIC11.94□□□□□ -0.5
Ctdp1Q7TSG2 8030442B05Rik-201ENSMUST00000192626 1035 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Ctdp1Q7TSG2 Rbakdn-201ENSMUST00000198334 520 ntTSL 2 BASIC11.94□□□□□ -0.5
Ctdp1Q7TSG2 AC122408.1-201ENSMUST00000218949 218 ntBASIC11.94□□□□□ -0.5
Ctdp1Q7TSG2 Gm40578-201ENSMUST00000220837 390 ntTSL 2 BASIC11.94□□□□□ -0.5
Ctdp1Q7TSG2 AC112945.1-201ENSMUST00000226413 514 ntBASIC11.94□□□□□ -0.5
Ctdp1Q7TSG2 Krtap5-1-201ENSMUST00000084413 588 ntAPPRIS P1 TSL 5 BASIC11.94□□□□□ -0.5
Ctdp1Q7TSG2 Tagln3-201ENSMUST00000096057 1240 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Ctdp1Q7TSG2 Tom1l2-204ENSMUST00000095254 4940 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Ctdp1Q7TSG2 Tiam1-204ENSMUST00000114124 7406 ntAPPRIS P1 TSL 5 BASIC11.94□□□□□ -0.5
Ctdp1Q7TSG2 Ccdc136-208ENSMUST00000180829 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Ctdp1Q7TSG2 Hottip-201ENSMUST00000141300 2346 ntTSL 2 BASIC11.94□□□□□ -0.5
Ctdp1Q7TSG2 Lrfn5-202ENSMUST00000119481 3615 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Ctdp1Q7TSG2 Eno3-201ENSMUST00000072841 1454 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Ctdp1Q7TSG2 Psat1-205ENSMUST00000162053 2291 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Ctdp1Q7TSG2 Bod1l-201ENSMUST00000050556 10540 ntAPPRIS P3 TSL 5 BASIC11.94□□□□□ -0.5
Ctdp1Q7TSG2 2010111I01Rik-201ENSMUST00000021911 2979 ntAPPRIS ALT2 TSL 5 BASIC11.94□□□□□ -0.5
Ctdp1Q7TSG2 Ighmbp2-201ENSMUST00000025751 3720 ntAPPRIS P2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Ctdp1Q7TSG2 Zmym6-201ENSMUST00000046751 4210 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Ctdp1Q7TSG2 Fam90a1b-201ENSMUST00000044989 2939 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Ctdp1Q7TSG2 Kdm4a-204ENSMUST00000106406 4663 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Retrieved 100 of 76,532 protein–RNA pairs in 74.6 ms