Protein–RNA interactions for Protein: Q6ZPL9

Ddx55, ATP-dependent RNA helicase DDX55, mousemouse

Known RBP Predictions only

Length 600 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx55Q6ZPL9 Gm36307-201ENSMUST00000195831 953 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Ddx55Q6ZPL9 Gm31314-201ENSMUST00000201435 609 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Ddx55Q6ZPL9 Gm45783-201ENSMUST00000210877 656 ntAPPRIS P1 TSL 3 BASIC12.5□□□□□ -0.41
Ddx55Q6ZPL9 Thy1-205ENSMUST00000215156 460 ntTSL 5 BASIC12.5□□□□□ -0.41
Ddx55Q6ZPL9 Tmod3-205ENSMUST00000215821 898 ntTSL 3 BASIC12.5□□□□□ -0.41
Ddx55Q6ZPL9 Ccl25-201ENSMUST00000024004 1058 ntAPPRIS P2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Ddx55Q6ZPL9 Gm5424-201ENSMUST00000053865 1240 ntBASIC12.5□□□□□ -0.41
Ddx55Q6ZPL9 Olfr1417-201ENSMUST00000061235 948 ntAPPRIS P1 BASIC12.5□□□□□ -0.41
Ddx55Q6ZPL9 Olfr1121-201ENSMUST00000062555 945 ntAPPRIS P1 BASIC12.5□□□□□ -0.41
Ddx55Q6ZPL9 Pcdh1-202ENSMUST00000159405 3880 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
Ddx55Q6ZPL9 Gm12716-201ENSMUST00000120606 1354 ntBASIC12.5□□□□□ -0.41
Ddx55Q6ZPL9 Gm26818-201ENSMUST00000181367 1360 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Ddx55Q6ZPL9 Ttc1-201ENSMUST00000048578 1438 ntAPPRIS P2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Ddx55Q6ZPL9 Mcemp1-201ENSMUST00000014118 1494 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Ddx55Q6ZPL9 Tcl1b4-202ENSMUST00000222867 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Ddx55Q6ZPL9 Atxn7l1-203ENSMUST00000110824 1675 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Ddx55Q6ZPL9 Nr5a2-205ENSMUST00000192929 1756 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Ddx55Q6ZPL9 Ppid-201ENSMUST00000029382 1752 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Ddx55Q6ZPL9 Cd247-205ENSMUST00000161559 1816 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Ddx55Q6ZPL9 E230029C05Rik-203ENSMUST00000208028 2066 ntBASIC12.5□□□□□ -0.41
Ddx55Q6ZPL9 Gm42833-201ENSMUST00000196019 2124 ntBASIC12.5□□□□□ -0.41
Ddx55Q6ZPL9 Stim1-209ENSMUST00000211457 2183 ntTSL 5 BASIC12.5□□□□□ -0.41
Ddx55Q6ZPL9 Galntl6-202ENSMUST00000098757 2210 ntTSL 5 BASIC12.5□□□□□ -0.41
Ddx55Q6ZPL9 Cd19-201ENSMUST00000032968 2432 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Ddx55Q6ZPL9 Slc26a6-201ENSMUST00000098376 2402 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
Ddx55Q6ZPL9 Serpine1-202ENSMUST00000077523 2697 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
Ddx55Q6ZPL9 Slc25a40-201ENSMUST00000066921 2784 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Ddx55Q6ZPL9 Nupl1-206ENSMUST00000225111 2936 ntBASIC12.5□□□□□ -0.41
Ddx55Q6ZPL9 Mast1-201ENSMUST00000109741 4872 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Ddx55Q6ZPL9 Camta2-202ENSMUST00000100933 4383 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
Ddx55Q6ZPL9 Cux1-204ENSMUST00000175975 10945 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Ddx55Q6ZPL9 Rspo2-203ENSMUST00000226810 3091 ntAPPRIS P1 BASIC12.49□□□□□ -0.41
Ddx55Q6ZPL9 Gm45902-202ENSMUST00000140494 2390 ntAPPRIS P1 TSL 2 BASIC12.49□□□□□ -0.41
Ddx55Q6ZPL9 6030443J06Rik-201ENSMUST00000181209 2380 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Ddx55Q6ZPL9 Bmp3-201ENSMUST00000031278 6548 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Ddx55Q6ZPL9 Eloc-208ENSMUST00000188641 2014 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Ddx55Q6ZPL9 Igtp-201ENSMUST00000035266 2022 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Ddx55Q6ZPL9 Sin3a-206ENSMUST00000168177 5086 ntAPPRIS ALT1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Ddx55Q6ZPL9 Exosc9-201ENSMUST00000029269 1617 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Ddx55Q6ZPL9 Tns2-202ENSMUST00000169627 4707 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Ddx55Q6ZPL9 Gm29245-201ENSMUST00000187332 1416 ntBASIC12.49□□□□□ -0.41
Ddx55Q6ZPL9 Ccdc130-201ENSMUST00000005120 1441 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
Ddx55Q6ZPL9 Gm8725-201ENSMUST00000221829 1333 ntBASIC12.49□□□□□ -0.41
Ddx55Q6ZPL9 Gm13192-201ENSMUST00000101199 208 ntBASIC12.49□□□□□ -0.41
Ddx55Q6ZPL9 4930412O13Rik-202ENSMUST00000114919 558 ntAPPRIS ALT2 TSL 2 BASIC12.49□□□□□ -0.41
Ddx55Q6ZPL9 Gm10443-201ENSMUST00000119024 210 ntBASIC12.49□□□□□ -0.41
Ddx55Q6ZPL9 6430531B16Rik-202ENSMUST00000121412 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Ddx55Q6ZPL9 Gm12950-201ENSMUST00000121683 417 ntBASIC12.49□□□□□ -0.41
Ddx55Q6ZPL9 Gm14004-201ENSMUST00000138875 590 ntTSL 2 BASIC12.49□□□□□ -0.41
Ddx55Q6ZPL9 Tctex1d1-205ENSMUST00000140654 891 ntAPPRIS ALT2 TSL 2 BASIC12.49□□□□□ -0.41
Ddx55Q6ZPL9 Gm7805-201ENSMUST00000154348 448 ntBASIC12.49□□□□□ -0.41
Ddx55Q6ZPL9 Atp5e-201ENSMUST00000016396 421 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Ddx55Q6ZPL9 Stard6-206ENSMUST00000174118 1185 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Ddx55Q6ZPL9 Gm20091-201ENSMUST00000179683 189 ntBASIC12.49□□□□□ -0.41
Ddx55Q6ZPL9 Gm26943-201ENSMUST00000182295 957 ntBASIC12.49□□□□□ -0.41
Ddx55Q6ZPL9 Gm37860-201ENSMUST00000195380 1034 ntBASIC12.49□□□□□ -0.41
Ddx55Q6ZPL9 Gm7047-201ENSMUST00000196224 1063 ntBASIC12.49□□□□□ -0.41
Ddx55Q6ZPL9 Gm20568-201ENSMUST00000197129 208 ntBASIC12.49□□□□□ -0.41
Ddx55Q6ZPL9 Gm5311-201ENSMUST00000203518 709 ntBASIC12.49□□□□□ -0.41
Ddx55Q6ZPL9 Gm32872-201ENSMUST00000220037 205 ntTSL 3 BASIC12.49□□□□□ -0.41
Ddx55Q6ZPL9 AC102569.1-201ENSMUST00000221563 685 ntBASIC12.49□□□□□ -0.41
Ddx55Q6ZPL9 Lcn3-201ENSMUST00000028304 684 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Ddx55Q6ZPL9 Stpg4-201ENSMUST00000040609 847 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Ddx55Q6ZPL9 Gm9701-201ENSMUST00000077976 427 ntBASIC12.49□□□□□ -0.41
Ddx55Q6ZPL9 Dmbt1-201ENSMUST00000084509 6243 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
Ddx55Q6ZPL9 Trim23-201ENSMUST00000022225 3416 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Ddx55Q6ZPL9 Esco2-201ENSMUST00000022613 2913 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Ddx55Q6ZPL9 Nxph1-202ENSMUST00000160300 2815 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Ddx55Q6ZPL9 Tmem129-201ENSMUST00000019439 2828 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Ddx55Q6ZPL9 Adcy9-201ENSMUST00000005719 4457 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
Ddx55Q6ZPL9 Tmem181a-201ENSMUST00000088940 4405 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Ddx55Q6ZPL9 Traf7-201ENSMUST00000070777 2384 ntTSL 5 BASIC12.49□□□□□ -0.41
Ddx55Q6ZPL9 Myh6-205ENSMUST00000226297 6008 ntAPPRIS P1 BASIC12.49□□□□□ -0.41
Ddx55Q6ZPL9 Tunar-201ENSMUST00000180458 3282 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Ddx55Q6ZPL9 Kcna10-201ENSMUST00000055064 1913 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Ddx55Q6ZPL9 AC160060.1-201ENSMUST00000217840 1813 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Ddx55Q6ZPL9 Mettl8-201ENSMUST00000090849 1842 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Ddx55Q6ZPL9 Slc6a12-209ENSMUST00000171008 1674 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
Ddx55Q6ZPL9 Otud7b-201ENSMUST00000035519 8043 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Ddx55Q6ZPL9 Gm4755-201ENSMUST00000181803 2647 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Ddx55Q6ZPL9 Ankrd55-202ENSMUST00000056047 1556 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Ddx55Q6ZPL9 Prkch-201ENSMUST00000021527 3545 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Ddx55Q6ZPL9 Mettl18-202ENSMUST00000111490 1419 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Ddx55Q6ZPL9 Pip4k2c-201ENSMUST00000013970 3307 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Ddx55Q6ZPL9 4921507P07Rik-201ENSMUST00000031852 2378 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Ddx55Q6ZPL9 Vamp1-202ENSMUST00000063588 1400 ntTSL 2 BASIC12.48□□□□□ -0.41
Ddx55Q6ZPL9 Sgpp2-201ENSMUST00000036172 4002 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Ddx55Q6ZPL9 Tubb2b-201ENSMUST00000075774 2182 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Ddx55Q6ZPL9 1110020A21Rik-201ENSMUST00000181147 853 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Ddx55Q6ZPL9 Gm37597-201ENSMUST00000191853 382 ntBASIC12.48□□□□□ -0.41
Ddx55Q6ZPL9 Gm44540-201ENSMUST00000205640 354 ntBASIC12.48□□□□□ -0.41
Ddx55Q6ZPL9 AC132384.2-201ENSMUST00000218018 526 ntBASIC12.48□□□□□ -0.41
Ddx55Q6ZPL9 CT010486.3-201ENSMUST00000224555 811 ntBASIC12.48□□□□□ -0.41
Ddx55Q6ZPL9 AC134860.2-201ENSMUST00000225277 1036 ntBASIC12.48□□□□□ -0.41
Ddx55Q6ZPL9 Iah1-201ENSMUST00000076813 1141 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Ddx55Q6ZPL9 Gm4778-201ENSMUST00000098878 1098 ntBASIC12.48□□□□□ -0.41
Ddx55Q6ZPL9 Tjp3-205ENSMUST00000219479 2901 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Ddx55Q6ZPL9 Cttn-201ENSMUST00000033407 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Ddx55Q6ZPL9 Stim1-202ENSMUST00000209255 4362 ntTSL 5 BASIC12.48□□□□□ -0.41
Ddx55Q6ZPL9 Hectd2os-203ENSMUST00000142067 2662 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 49.8 ms