Protein–RNA interactions for Protein: Q6PDX6

Rnf220, E3 ubiquitin-protein ligase Rnf220, mousemouse

Predictions only

Length 566 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf220Q6PDX6 Gm5149-201ENSMUST00000199768 620 ntTSL 3 BASIC10.38□□□□□ -0.75
Rnf220Q6PDX6 Scoc-203ENSMUST00000212031 409 ntAPPRIS P3 TSL 1 (best) BASIC10.38□□□□□ -0.75
Rnf220Q6PDX6 Rassf5-205ENSMUST00000212202 958 ntTSL 5 BASIC10.38□□□□□ -0.75
Rnf220Q6PDX6 Gm26953-204ENSMUST00000212526 553 ntTSL 5 BASIC10.38□□□□□ -0.75
Rnf220Q6PDX6 Calml4-207ENSMUST00000215968 526 ntTSL 2 BASIC10.38□□□□□ -0.75
Rnf220Q6PDX6 AC025913.2-202ENSMUST00000219248 605 ntTSL 5 BASIC10.38□□□□□ -0.75
Rnf220Q6PDX6 Gm36756-203ENSMUST00000223029 1166 ntTSL 5 BASIC10.38□□□□□ -0.75
Rnf220Q6PDX6 Rsph9-201ENSMUST00000024762 966 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Rnf220Q6PDX6 Polr2d-201ENSMUST00000025106 956 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Rnf220Q6PDX6 Hsd17b10-201ENSMUST00000026289 962 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Rnf220Q6PDX6 Rps3a1-201ENSMUST00000029722 977 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Rnf220Q6PDX6 Dnal4-202ENSMUST00000069877 1011 ntTSL 5 BASIC10.38□□□□□ -0.75
Rnf220Q6PDX6 Olfr667-201ENSMUST00000071362 981 ntAPPRIS P1 BASIC10.38□□□□□ -0.75
Rnf220Q6PDX6 Vmn1r8-201ENSMUST00000078186 1213 ntAPPRIS P1 BASIC10.38□□□□□ -0.75
Rnf220Q6PDX6 Olfr666-201ENSMUST00000081116 957 ntAPPRIS P1 BASIC10.38□□□□□ -0.75
Rnf220Q6PDX6 Fam234a-202ENSMUST00000118487 2629 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Rnf220Q6PDX6 Tgfbrap1-201ENSMUST00000095014 5607 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Rnf220Q6PDX6 Slc38a4-202ENSMUST00000166223 1908 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Rnf220Q6PDX6 Gsdmc2-202ENSMUST00000188404 2078 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Rnf220Q6PDX6 Mmp21-202ENSMUST00000122136 1599 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Rnf220Q6PDX6 Auts2-209ENSMUST00000161804 5392 ntAPPRIS P5 TSL 1 (best) BASIC10.38□□□□□ -0.75
Rnf220Q6PDX6 Prdx6-202ENSMUST00000071718 2387 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Rnf220Q6PDX6 Bub1b-201ENSMUST00000038341 3668 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Rnf220Q6PDX6 Tro-203ENSMUST00000112709 6610 ntAPPRIS P3 TSL 5 BASIC10.38□□□□□ -0.75
Rnf220Q6PDX6 Rdh16f1-201ENSMUST00000128247 2766 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Rnf220Q6PDX6 Fam84a-201ENSMUST00000020926 4164 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Rnf220Q6PDX6 Enthd1-201ENSMUST00000096347 2110 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Rnf220Q6PDX6 Fgd1-202ENSMUST00000112685 3240 ntTSL 5 BASIC10.37□□□□□ -0.75
Rnf220Q6PDX6 Abcc4-201ENSMUST00000036554 5715 ntAPPRIS P3 TSL 1 (best) BASIC10.37□□□□□ -0.75
Rnf220Q6PDX6 Olfr624-201ENSMUST00000062144 5731 ntAPPRIS P1 BASIC10.37□□□□□ -0.75
Rnf220Q6PDX6 Gm9271-201ENSMUST00000185988 2580 ntBASIC10.37□□□□□ -0.75
Rnf220Q6PDX6 Slc6a16-203ENSMUST00000213347 2865 ntAPPRIS P5 TSL 5 BASIC10.37□□□□□ -0.75
Rnf220Q6PDX6 Gm43820-201ENSMUST00000199414 3346 ntBASIC10.37□□□□□ -0.75
Rnf220Q6PDX6 Tcn2-203ENSMUST00000109989 1949 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Rnf220Q6PDX6 Ces2e-201ENSMUST00000034355 2699 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Rnf220Q6PDX6 Tra2b-204ENSMUST00000161286 3403 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Rnf220Q6PDX6 Ccnt2-201ENSMUST00000027587 6738 ntAPPRIS P2 TSL 1 (best) BASIC10.37□□□□□ -0.75
Rnf220Q6PDX6 Slf2-201ENSMUST00000096053 6880 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Rnf220Q6PDX6 Rbm3-204ENSMUST00000115617 1152 ntAPPRIS P3 TSL 1 (best) BASIC10.37□□□□□ -0.75
Rnf220Q6PDX6 Gm5940-201ENSMUST00000117582 1068 ntBASIC10.37□□□□□ -0.75
Rnf220Q6PDX6 Gm11660-201ENSMUST00000120955 412 ntBASIC10.37□□□□□ -0.75
Rnf220Q6PDX6 Cdc23-203ENSMUST00000133181 4133 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Rnf220Q6PDX6 Gm15501-201ENSMUST00000133910 849 ntTSL 3 BASIC10.37□□□□□ -0.75
Rnf220Q6PDX6 Gm12199-201ENSMUST00000137567 517 ntTSL 3 BASIC10.37□□□□□ -0.75
Rnf220Q6PDX6 Hoxb5os-202ENSMUST00000150698 596 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Rnf220Q6PDX6 AA672651-201ENSMUST00000151550 489 ntTSL 2 BASIC10.37□□□□□ -0.75
Rnf220Q6PDX6 Sh2d6-203ENSMUST00000159877 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC10.37□□□□□ -0.75
Rnf220Q6PDX6 Sh2d6-206ENSMUST00000162561 1251 ntAPPRIS P5 TSL 1 (best) BASIC10.37□□□□□ -0.75
Rnf220Q6PDX6 Nudt17-202ENSMUST00000171249 1110 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Rnf220Q6PDX6 Ap1g1-206ENSMUST00000179104 1096 ntBASIC10.37□□□□□ -0.75
Rnf220Q6PDX6 Gm36937-201ENSMUST00000192957 429 ntTSL 3 BASIC10.37□□□□□ -0.75
Rnf220Q6PDX6 Gm19710-201ENSMUST00000200257 640 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Rnf220Q6PDX6 Gm44066-201ENSMUST00000203263 519 ntTSL 3 BASIC10.37□□□□□ -0.75
Rnf220Q6PDX6 A530021J07Rik-202ENSMUST00000207727 1406 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Rnf220Q6PDX6 AC125206.1-201ENSMUST00000214070 739 ntTSL 5 BASIC10.37□□□□□ -0.75
Rnf220Q6PDX6 AC159896.2-201ENSMUST00000214753 269 ntBASIC10.37□□□□□ -0.75
Rnf220Q6PDX6 AC132260.2-201ENSMUST00000224482 344 ntBASIC10.37□□□□□ -0.75
Rnf220Q6PDX6 Thoc7-209ENSMUST00000225325 765 ntBASIC10.37□□□□□ -0.75
Rnf220Q6PDX6 AC161537.1-201ENSMUST00000226199 1015 ntBASIC10.37□□□□□ -0.75
Rnf220Q6PDX6 Ccdc183-201ENSMUST00000028309 1719 ntAPPRIS P1 TSL 5 BASIC10.37□□□□□ -0.75
Rnf220Q6PDX6 Sit1-201ENSMUST00000030180 1228 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Rnf220Q6PDX6 Gm7399-201ENSMUST00000032395 858 ntBASIC10.37□□□□□ -0.75
Rnf220Q6PDX6 Abcf3-201ENSMUST00000003319 3090 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Rnf220Q6PDX6 Ovgp1-201ENSMUST00000000573 2616 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Rnf220Q6PDX6 Ccdc28a-202ENSMUST00000080860 1190 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Rnf220Q6PDX6 Armcx4-201ENSMUST00000124226 7996 ntAPPRIS P1 TSL 2 BASIC10.37□□□□□ -0.75
Rnf220Q6PDX6 Slc22a14-204ENSMUST00000170400 2110 ntAPPRIS P1 TSL 5 BASIC10.37□□□□□ -0.75
Rnf220Q6PDX6 Tcn2-202ENSMUST00000109988 1957 ntAPPRIS P1 TSL 5 BASIC10.37□□□□□ -0.75
Rnf220Q6PDX6 Kcnma1-213ENSMUST00000188991 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC10.37□□□□□ -0.75
Rnf220Q6PDX6 Radil-202ENSMUST00000085758 3714 ntAPPRIS ALT2 TSL 2 BASIC10.37□□□□□ -0.75
Rnf220Q6PDX6 Skp2-201ENSMUST00000096482 3118 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Rnf220Q6PDX6 Rnf123-207ENSMUST00000160249 4426 ntAPPRIS P3 TSL 5 BASIC10.37□□□□□ -0.75
Rnf220Q6PDX6 Prdm1-204ENSMUST00000218369 2517 ntAPPRIS ALT2 TSL 5 BASIC10.37□□□□□ -0.75
Rnf220Q6PDX6 Polr3c-201ENSMUST00000029741 2390 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Rnf220Q6PDX6 Gm45768-201ENSMUST00000206763 3202 ntBASIC10.37□□□□□ -0.75
Rnf220Q6PDX6 Alppl2-201ENSMUST00000027455 2092 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Rnf220Q6PDX6 Gm7841-201ENSMUST00000122108 1629 ntBASIC10.36□□□□□ -0.75
Rnf220Q6PDX6 Gm4810-201ENSMUST00000177721 1607 ntBASIC10.36□□□□□ -0.75
Rnf220Q6PDX6 Gm7168-201ENSMUST00000088809 1603 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Rnf220Q6PDX6 Akt1-205ENSMUST00000128300 1342 ntTSL 5 BASIC10.36□□□□□ -0.75
Rnf220Q6PDX6 Fpr1-201ENSMUST00000061516 1324 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Rnf220Q6PDX6 Kdm4a-201ENSMUST00000050288 3279 ntAPPRIS P3 TSL 1 (best) BASIC10.36□□□□□ -0.75
Rnf220Q6PDX6 Npas4-201ENSMUST00000056129 3277 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Rnf220Q6PDX6 Wnt5a-202ENSMUST00000112272 3650 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Rnf220Q6PDX6 Gm4419-201ENSMUST00000180671 1729 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Rnf220Q6PDX6 Sema4d-203ENSMUST00000110040 4472 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Rnf220Q6PDX6 Sema4d-201ENSMUST00000021900 4482 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Rnf220Q6PDX6 Dcc-201ENSMUST00000073379 4855 ntTSL 5 BASIC10.36□□□□□ -0.75
Rnf220Q6PDX6 Gm42488-201ENSMUST00000197648 3225 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Rnf220Q6PDX6 AC123619.2-202ENSMUST00000225097 1568 ntBASIC10.36□□□□□ -0.75
Rnf220Q6PDX6 Tigd4-201ENSMUST00000062623 3459 ntAPPRIS P1 BASIC10.36□□□□□ -0.75
Rnf220Q6PDX6 Myo18a-208ENSMUST00000108375 7513 ntAPPRIS ALT2 TSL 5 BASIC10.36□□□□□ -0.75
Rnf220Q6PDX6 Svs1-201ENSMUST00000037696 2775 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Rnf220Q6PDX6 Med12l-206ENSMUST00000199659 11006 ntAPPRIS P2 TSL 5 BASIC10.36□□□□□ -0.75
Rnf220Q6PDX6 Nrep-201ENSMUST00000051087 2223 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Rnf220Q6PDX6 Gm16686-201ENSMUST00000141816 396 ntAPPRIS P1 BASIC10.36□□□□□ -0.75
Rnf220Q6PDX6 Hsbp1l1-201ENSMUST00000166219 1251 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Rnf220Q6PDX6 Gm17334-201ENSMUST00000170390 907 ntAPPRIS P1 BASIC10.36□□□□□ -0.75
Rnf220Q6PDX6 5430405H02Rik-202ENSMUST00000176134 1196 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Rnf220Q6PDX6 Gm43050-201ENSMUST00000201062 338 ntTSL 2 BASIC10.36□□□□□ -0.75
Retrieved 100 of 76,532 protein–RNA pairs in 101.9 ms