Protein–RNA interactions for Protein: Q6PDG5

Smarcc2, SWI/SNF complex subunit SMARCC2, mousemouse

Predictions only

Length 1,213 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcc2Q6PDG5 Optc-205ENSMUST00000153617 1615 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Smarcc2Q6PDG5 Cc2d1a-201ENSMUST00000040383 3471 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Smarcc2Q6PDG5 Rbl2-210ENSMUST00000211136 4504 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Smarcc2Q6PDG5 Mta1-202ENSMUST00000069690 2697 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
Smarcc2Q6PDG5 Rps6ka6-204ENSMUST00000113428 4135 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
Smarcc2Q6PDG5 Dll4-201ENSMUST00000102517 3747 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Smarcc2Q6PDG5 Adam8-202ENSMUST00000106069 3117 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
Smarcc2Q6PDG5 Adam8-201ENSMUST00000026546 3100 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Smarcc2Q6PDG5 Igkv3-10-201ENSMUST00000103397 356 ntAPPRIS ALT2 BASIC12.81□□□□□ -0.36
Smarcc2Q6PDG5 Trmt10b-202ENSMUST00000107800 983 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
Smarcc2Q6PDG5 1700071K01Rik-201ENSMUST00000117522 819 ntBASIC12.81□□□□□ -0.36
Smarcc2Q6PDG5 Gm12194-201ENSMUST00000117756 1012 ntBASIC12.81□□□□□ -0.36
Smarcc2Q6PDG5 Gm13284-201ENSMUST00000121020 547 ntBASIC12.81□□□□□ -0.36
Smarcc2Q6PDG5 Igf1-205ENSMUST00000121952 798 ntTSL 3 BASIC12.81□□□□□ -0.36
Smarcc2Q6PDG5 4930583K01Rik-201ENSMUST00000138180 925 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Smarcc2Q6PDG5 Mocs2-203ENSMUST00000164737 745 ntTSL 3 BASIC12.81□□□□□ -0.36
Smarcc2Q6PDG5 Rps28-203ENSMUST00000173019 437 ntAPPRIS P1 TSL 3 BASIC12.81□□□□□ -0.36
Smarcc2Q6PDG5 Gm23153-201ENSMUST00000175323 313 ntBASIC12.81□□□□□ -0.36
Smarcc2Q6PDG5 Gm6407-201ENSMUST00000176468 549 ntBASIC12.81□□□□□ -0.36
Smarcc2Q6PDG5 Ly6l-201ENSMUST00000177479 430 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
Smarcc2Q6PDG5 A430105J06Rik-201ENSMUST00000180869 1275 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Smarcc2Q6PDG5 Gm37597-201ENSMUST00000191853 382 ntBASIC12.81□□□□□ -0.36
Smarcc2Q6PDG5 Gm43695-201ENSMUST00000196545 196 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Smarcc2Q6PDG5 Gtf3c6-201ENSMUST00000019982 887 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Smarcc2Q6PDG5 Gm15802-202ENSMUST00000209595 1094 ntTSL 5 BASIC12.81□□□□□ -0.36
Smarcc2Q6PDG5 Gm8436-201ENSMUST00000210152 1080 ntBASIC12.81□□□□□ -0.36
Smarcc2Q6PDG5 Olfr567-ps1-201ENSMUST00000210349 857 ntBASIC12.81□□□□□ -0.36
Smarcc2Q6PDG5 Gm5749-201ENSMUST00000210673 1090 ntBASIC12.81□□□□□ -0.36
Smarcc2Q6PDG5 AC154826.1-201ENSMUST00000217369 498 ntTSL 5 BASIC12.81□□□□□ -0.36
Smarcc2Q6PDG5 AC160028.1-201ENSMUST00000219645 1095 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Smarcc2Q6PDG5 Gm12216-207ENSMUST00000220191 1073 ntAPPRIS P5 TSL 5 BASIC12.81□□□□□ -0.36
Smarcc2Q6PDG5 AC164618.2-201ENSMUST00000224770 573 ntBASIC12.81□□□□□ -0.36
Smarcc2Q6PDG5 AC140293.1-201ENSMUST00000225626 1247 ntBASIC12.81□□□□□ -0.36
Smarcc2Q6PDG5 Omt2b-201ENSMUST00000043734 735 ntAPPRIS P1 TSL 2 BASIC12.81□□□□□ -0.36
Smarcc2Q6PDG5 Lsamp-201ENSMUST00000078873 2951 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Smarcc2Q6PDG5 Gm2174-201ENSMUST00000079663 402 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
Smarcc2Q6PDG5 Taar7d-201ENSMUST00000092657 1077 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
Smarcc2Q6PDG5 Iqgap3-201ENSMUST00000071812 5756 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Smarcc2Q6PDG5 Slc10a1-202ENSMUST00000218162 1749 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Smarcc2Q6PDG5 Gm11571-201ENSMUST00000136820 2396 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Smarcc2Q6PDG5 Vmn2r18-201ENSMUST00000165928 2367 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
Smarcc2Q6PDG5 Wbp1l-204ENSMUST00000138302 3900 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
Smarcc2Q6PDG5 Gm5766-201ENSMUST00000160520 1977 ntBASIC12.81□□□□□ -0.36
Smarcc2Q6PDG5 Nfe2l1-212ENSMUST00000169828 3530 ntTSL 2 BASIC12.81□□□□□ -0.36
Smarcc2Q6PDG5 Fdft1-201ENSMUST00000054963 2860 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Smarcc2Q6PDG5 Tubgcp4-201ENSMUST00000039541 4206 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
Smarcc2Q6PDG5 Cyp2s1-202ENSMUST00000108395 3161 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Smarcc2Q6PDG5 Topors-201ENSMUST00000042575 3856 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Smarcc2Q6PDG5 Tnip1-203ENSMUST00000102731 2973 ntAPPRIS P3 TSL 5 BASIC12.81□□□□□ -0.36
Smarcc2Q6PDG5 Rtn4ip1-201ENSMUST00000054418 2981 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Smarcc2Q6PDG5 Dna2-203ENSMUST00000131422 4122 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Smarcc2Q6PDG5 Rasal1-201ENSMUST00000031606 3212 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Smarcc2Q6PDG5 Dclk2-209ENSMUST00000195561 3486 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Smarcc2Q6PDG5 Knop1-202ENSMUST00000063607 4884 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Smarcc2Q6PDG5 Dnm3-202ENSMUST00000086074 7523 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
Smarcc2Q6PDG5 Gm4755-201ENSMUST00000181803 2647 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Smarcc2Q6PDG5 Gm42141-201ENSMUST00000196534 2172 ntBASIC12.8□□□□□ -0.36
Smarcc2Q6PDG5 Gon4l-203ENSMUST00000107498 7537 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Smarcc2Q6PDG5 Ktn1-220ENSMUST00000190252 4436 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Smarcc2Q6PDG5 Riox2-202ENSMUST00000120667 2200 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Smarcc2Q6PDG5 Slc4a8-204ENSMUST00000162049 3532 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Smarcc2Q6PDG5 Ralyl-202ENSMUST00000108373 267 ntTSL 5 BASIC12.8□□□□□ -0.36
Smarcc2Q6PDG5 Rpl35a-205ENSMUST00000115079 510 ntAPPRIS P1 TSL 2 BASIC12.8□□□□□ -0.36
Smarcc2Q6PDG5 Gm12136-201ENSMUST00000120460 1209 ntBASIC12.8□□□□□ -0.36
Smarcc2Q6PDG5 Olfr269-ps1-201ENSMUST00000120783 302 ntBASIC12.8□□□□□ -0.36
Smarcc2Q6PDG5 Gm13117-201ENSMUST00000120894 691 ntBASIC12.8□□□□□ -0.36
Smarcc2Q6PDG5 Gm11269-201ENSMUST00000157011 595 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Smarcc2Q6PDG5 Gm22442-201ENSMUST00000157256 144 ntBASIC12.8□□□□□ -0.36
Smarcc2Q6PDG5 5830487J09Rik-201ENSMUST00000198600 1256 ntTSL 5 BASIC12.8□□□□□ -0.36
Smarcc2Q6PDG5 Gm42953-201ENSMUST00000199363 581 ntTSL 3 BASIC12.8□□□□□ -0.36
Smarcc2Q6PDG5 Gm43380-201ENSMUST00000200421 220 ntBASIC12.8□□□□□ -0.36
Smarcc2Q6PDG5 Gm3017-201ENSMUST00000203603 1126 ntBASIC12.8□□□□□ -0.36
Smarcc2Q6PDG5 Gm10752-201ENSMUST00000218348 729 ntBASIC12.8□□□□□ -0.36
Smarcc2Q6PDG5 1700011B04Rik-204ENSMUST00000220859 422 ntTSL 5 BASIC12.8□□□□□ -0.36
Smarcc2Q6PDG5 Mitd1-201ENSMUST00000027257 1231 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Smarcc2Q6PDG5 4921508M14Rik-201ENSMUST00000061679 1099 ntBASIC12.8□□□□□ -0.36
Smarcc2Q6PDG5 Olfr553-201ENSMUST00000098222 981 ntAPPRIS P1 BASIC12.8□□□□□ -0.36
Smarcc2Q6PDG5 Arhgap24-203ENSMUST00000094559 3346 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Smarcc2Q6PDG5 Gpr173-201ENSMUST00000070316 4855 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Smarcc2Q6PDG5 Glb1l-201ENSMUST00000113623 2339 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
Smarcc2Q6PDG5 Gm43937-201ENSMUST00000204640 3122 ntBASIC12.8□□□□□ -0.36
Smarcc2Q6PDG5 Pafah1b2-201ENSMUST00000172450 6873 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Smarcc2Q6PDG5 Rab30-202ENSMUST00000107179 1304 ntTSL 5 BASIC12.8□□□□□ -0.36
Smarcc2Q6PDG5 Tbl2-204ENSMUST00000153183 7488 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Smarcc2Q6PDG5 Mroh8-202ENSMUST00000143663 3460 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Smarcc2Q6PDG5 Zfp384-206ENSMUST00000112425 2691 ntTSL 5 BASIC12.8□□□□□ -0.36
Smarcc2Q6PDG5 Ica1-204ENSMUST00000115520 1876 ntAPPRIS P2 TSL 5 BASIC12.8□□□□□ -0.36
Smarcc2Q6PDG5 Usp17le-202ENSMUST00000211384 1885 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Smarcc2Q6PDG5 Etv3-201ENSMUST00000117293 2151 ntAPPRIS ALT2 TSL 2 BASIC12.8□□□□□ -0.36
Smarcc2Q6PDG5 AC174678.2-201ENSMUST00000156420 3275 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
Smarcc2Q6PDG5 Immt-206ENSMUST00000166975 2469 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Smarcc2Q6PDG5 Gm10545-201ENSMUST00000097612 4969 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Smarcc2Q6PDG5 Bsnd-201ENSMUST00000054472 2756 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Smarcc2Q6PDG5 Ccdc136-207ENSMUST00000154619 3356 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
Smarcc2Q6PDG5 Mecom-202ENSMUST00000108270 5692 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
Smarcc2Q6PDG5 Pde6c-202ENSMUST00000112329 2895 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Smarcc2Q6PDG5 Gm20671-201ENSMUST00000144673 1731 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
Smarcc2Q6PDG5 Ffar2-201ENSMUST00000053156 2301 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Smarcc2Q6PDG5 A530032D15Rik-201ENSMUST00000160792 1492 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Smarcc2Q6PDG5 Atcayos-203ENSMUST00000150782 3057 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 38.2 ms