Protein–RNA interactions for Protein: Q6P9Z1

Smarcd3, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 3, mousemouse

Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcd3Q6P9Z1 Gm7857-201ENSMUST00000117957 358 ntBASIC10.06□□□□□ -0.8
Smarcd3Q6P9Z1 Gm53-203ENSMUST00000143887 757 ntTSL 3 BASIC10.06□□□□□ -0.8
Smarcd3Q6P9Z1 Arf4os-201ENSMUST00000166902 566 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
Smarcd3Q6P9Z1 U2af1l4-234ENSMUST00000171850 564 ntTSL 5 BASIC10.06□□□□□ -0.8
Smarcd3Q6P9Z1 Gm23694-201ENSMUST00000179335 110 ntBASIC10.06□□□□□ -0.8
Smarcd3Q6P9Z1 Eloc-207ENSMUST00000187910 620 ntTSL 2 BASIC10.06□□□□□ -0.8
Smarcd3Q6P9Z1 Gm37301-201ENSMUST00000195412 568 ntBASIC10.06□□□□□ -0.8
Smarcd3Q6P9Z1 Gm43401-201ENSMUST00000198829 394 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
Smarcd3Q6P9Z1 Gm43852-201ENSMUST00000202098 917 ntBASIC10.06□□□□□ -0.8
Smarcd3Q6P9Z1 Gm8574-201ENSMUST00000203207 924 ntBASIC10.06□□□□□ -0.8
Smarcd3Q6P9Z1 Gm2517-201ENSMUST00000215651 348 ntBASIC10.06□□□□□ -0.8
Smarcd3Q6P9Z1 Gm5369-201ENSMUST00000217499 588 ntBASIC10.06□□□□□ -0.8
Smarcd3Q6P9Z1 AC124171.1-201ENSMUST00000221151 567 ntTSL 5 BASIC10.06□□□□□ -0.8
Smarcd3Q6P9Z1 CT009713.8-201ENSMUST00000225448 560 ntBASIC10.06□□□□□ -0.8
Smarcd3Q6P9Z1 Pbp2-201ENSMUST00000050471 1279 ntAPPRIS P1 BASIC10.06□□□□□ -0.8
Smarcd3Q6P9Z1 Agrp-201ENSMUST00000005849 661 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Smarcd3Q6P9Z1 Gm3402-202ENSMUST00000077133 924 ntAPPRIS ALT2 TSL 5 BASIC10.06□□□□□ -0.8
Smarcd3Q6P9Z1 Hist1h1b-201ENSMUST00000080511 743 ntAPPRIS P1 BASIC10.06□□□□□ -0.8
Smarcd3Q6P9Z1 Invs-201ENSMUST00000030029 5633 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Smarcd3Q6P9Z1 Sp6-201ENSMUST00000047997 3546 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Smarcd3Q6P9Z1 Plcxd2-201ENSMUST00000130481 7140 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Smarcd3Q6P9Z1 Cacna1f-201ENSMUST00000115725 6028 ntAPPRIS ALT2 TSL 5 BASIC10.06□□□□□ -0.8
Smarcd3Q6P9Z1 Trmt44-201ENSMUST00000030980 3790 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Smarcd3Q6P9Z1 Cdk5rap1-201ENSMUST00000028990 1970 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Smarcd3Q6P9Z1 Pcdha4-201ENSMUST00000192295 4129 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
Smarcd3Q6P9Z1 Grem1-201ENSMUST00000099575 4148 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Smarcd3Q6P9Z1 Sgca-205ENSMUST00000166320 1428 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Smarcd3Q6P9Z1 Gm6124-201ENSMUST00000188240 2580 ntBASIC10.06□□□□□ -0.8
Smarcd3Q6P9Z1 Cpeb1-209ENSMUST00000178892 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC10.06□□□□□ -0.8
Smarcd3Q6P9Z1 Gm5532-201ENSMUST00000097531 1751 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
Smarcd3Q6P9Z1 Uaca-202ENSMUST00000214354 4417 ntAPPRIS ALT2 TSL 5 BASIC10.06□□□□□ -0.8
Smarcd3Q6P9Z1 Gm13398-201ENSMUST00000149378 2837 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
Smarcd3Q6P9Z1 Gm15883-201ENSMUST00000153562 1690 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
Smarcd3Q6P9Z1 Arpp21-217ENSMUST00000161412 1687 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
Smarcd3Q6P9Z1 Aldh1a3-201ENSMUST00000015278 3443 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Smarcd3Q6P9Z1 Pdcd10-205ENSMUST00000161137 1927 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Smarcd3Q6P9Z1 1600014C10Rik-202ENSMUST00000165308 3335 ntAPPRIS P1 TSL 5 BASIC10.05□□□□□ -0.8
Smarcd3Q6P9Z1 1600014C10Rik-204ENSMUST00000178207 3341 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
Smarcd3Q6P9Z1 Gm18198-201ENSMUST00000204986 1551 ntBASIC10.05□□□□□ -0.8
Smarcd3Q6P9Z1 Apba2-201ENSMUST00000032732 3321 ntAPPRIS P2 TSL 1 (best) BASIC10.05□□□□□ -0.8
Smarcd3Q6P9Z1 Wwp2-204ENSMUST00000212205 2758 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
Smarcd3Q6P9Z1 Celsr2-201ENSMUST00000090558 10598 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Smarcd3Q6P9Z1 Atxn7l3-203ENSMUST00000107134 3712 ntAPPRIS ALT1 TSL 5 BASIC10.05□□□□□ -0.8
Smarcd3Q6P9Z1 Olfr1349-207ENSMUST00000216447 2448 ntAPPRIS P1 TSL 5 BASIC10.05□□□□□ -0.8
Smarcd3Q6P9Z1 Son-202ENSMUST00000114037 8399 ntAPPRIS P2 TSL 1 (best) BASIC10.05□□□□□ -0.8
Smarcd3Q6P9Z1 Capn15-204ENSMUST00000212149 4555 ntAPPRIS P3 TSL 5 BASIC10.05□□□□□ -0.8
Smarcd3Q6P9Z1 Abcg1-201ENSMUST00000024829 3610 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Smarcd3Q6P9Z1 Traf3-201ENSMUST00000021706 7060 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Smarcd3Q6P9Z1 Ubap2-202ENSMUST00000108068 4380 ntAPPRIS ALT2 TSL 1 (best) BASIC10.05□□□□□ -0.8
Smarcd3Q6P9Z1 Hist2h4-201ENSMUST00000171473 1630 ntAPPRIS P1 BASIC10.05□□□□□ -0.8
Smarcd3Q6P9Z1 Sgk1-203ENSMUST00000100036 2476 ntTSL 5 BASIC10.05□□□□□ -0.8
Smarcd3Q6P9Z1 Khdrbs2-204ENSMUST00000188257 5278 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
Smarcd3Q6P9Z1 Gm16099-202ENSMUST00000151873 660 ntTSL 5 BASIC10.05□□□□□ -0.8
Smarcd3Q6P9Z1 Arid3b-204ENSMUST00000164010 1259 ntTSL 5 BASIC10.05□□□□□ -0.8
Smarcd3Q6P9Z1 Gm17231-203ENSMUST00000170133 637 ntTSL 3 BASIC10.05□□□□□ -0.8
Smarcd3Q6P9Z1 H2-M2-202ENSMUST00000171139 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC10.05□□□□□ -0.8
Smarcd3Q6P9Z1 Tmem267-202ENSMUST00000176171 880 ntAPPRIS P1 TSL 2 BASIC10.05□□□□□ -0.8
Smarcd3Q6P9Z1 Gm21778-201ENSMUST00000178779 471 ntBASIC10.05□□□□□ -0.8
Smarcd3Q6P9Z1 Gm27341-201ENSMUST00000183570 106 ntBASIC10.05□□□□□ -0.8
Smarcd3Q6P9Z1 Gm27241-202ENSMUST00000185013 570 ntTSL 2 BASIC10.05□□□□□ -0.8
Smarcd3Q6P9Z1 Gm37466-201ENSMUST00000195692 652 ntBASIC10.05□□□□□ -0.8
Smarcd3Q6P9Z1 Gm43186-201ENSMUST00000198130 824 ntBASIC10.05□□□□□ -0.8
Smarcd3Q6P9Z1 1700112L15Rik-201ENSMUST00000212067 510 ntBASIC10.05□□□□□ -0.8
Smarcd3Q6P9Z1 1700128F08Rik-201ENSMUST00000034483 1110 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
Smarcd3Q6P9Z1 Lcn8-201ENSMUST00000038482 651 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Smarcd3Q6P9Z1 C1qb-201ENSMUST00000046384 1088 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Smarcd3Q6P9Z1 Crabp2-201ENSMUST00000005019 931 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Smarcd3Q6P9Z1 Prr15l-202ENSMUST00000062172 1242 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Smarcd3Q6P9Z1 Gtf2i-222ENSMUST00000174354 4084 ntAPPRIS ALT2 TSL 2 BASIC10.05□□□□□ -0.8
Smarcd3Q6P9Z1 Gm37368-201ENSMUST00000193173 3212 ntBASIC10.05□□□□□ -0.8
Smarcd3Q6P9Z1 Lvrn-201ENSMUST00000025358 3219 ntAPPRIS P1 TSL 5 BASIC10.05□□□□□ -0.8
Smarcd3Q6P9Z1 Elmo2-201ENSMUST00000071699 3247 ntAPPRIS ALT2 TSL 1 (best) BASIC10.05□□□□□ -0.8
Smarcd3Q6P9Z1 Tacc2-205ENSMUST00000207282 3464 ntAPPRIS ALT2 TSL 1 (best) BASIC10.05□□□□□ -0.8
Smarcd3Q6P9Z1 Fubp1-202ENSMUST00000166984 6523 ntAPPRIS P2 TSL 1 (best) BASIC10.05□□□□□ -0.8
Smarcd3Q6P9Z1 Fam47e-202ENSMUST00000131166 1500 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
Smarcd3Q6P9Z1 Zmynd8-221ENSMUST00000177633 5093 ntAPPRIS ALT2 TSL 1 (best) BASIC10.05□□□□□ -0.8
Smarcd3Q6P9Z1 Nrg1-212ENSMUST00000208598 1778 ntTSL 5 BASIC10.05□□□□□ -0.8
Smarcd3Q6P9Z1 Ppp1r17-201ENSMUST00000052827 1757 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Smarcd3Q6P9Z1 Prpf40b-202ENSMUST00000118287 3129 ntAPPRIS ALT2 TSL 1 (best) BASIC10.05□□□□□ -0.8
Smarcd3Q6P9Z1 Lnx1-202ENSMUST00000087161 2753 ntAPPRIS P1 TSL 5 BASIC10.05□□□□□ -0.8
Smarcd3Q6P9Z1 Dclk3-201ENSMUST00000111879 3005 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Smarcd3Q6P9Z1 Lrtm2-201ENSMUST00000068351 4001 ntAPPRIS P1 TSL 2 BASIC10.05□□□□□ -0.8
Smarcd3Q6P9Z1 Adra1a-202ENSMUST00000159068 4282 ntAPPRIS P1 TSL 2 BASIC10.05□□□□□ -0.8
Smarcd3Q6P9Z1 Dph7-201ENSMUST00000028351 1666 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Smarcd3Q6P9Z1 Zfp114-203ENSMUST00000206547 3154 ntAPPRIS P2 TSL 1 (best) BASIC10.05□□□□□ -0.8
Smarcd3Q6P9Z1 Ddx52-201ENSMUST00000049257 3194 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Smarcd3Q6P9Z1 Uhrf1-202ENSMUST00000113035 3402 ntAPPRIS ALT2 TSL 1 (best) BASIC10.05□□□□□ -0.8
Smarcd3Q6P9Z1 Olfr1490-202ENSMUST00000213900 5165 ntAPPRIS ALT2 TSL 5 BASIC10.05□□□□□ -0.8
Smarcd3Q6P9Z1 Unc5cl-201ENSMUST00000074574 2838 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Smarcd3Q6P9Z1 Tcp10a-202ENSMUST00000128533 2589 ntAPPRIS P2 TSL 1 (best) BASIC10.05□□□□□ -0.8
Smarcd3Q6P9Z1 Snhg17-203ENSMUST00000141809 1553 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
Smarcd3Q6P9Z1 Fasn-205ENSMUST00000206589 8333 ntAPPRIS ALT2 TSL 5 BASIC10.05□□□□□ -0.8
Smarcd3Q6P9Z1 Tank-204ENSMUST00000112501 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC10.05□□□□□ -0.8
Smarcd3Q6P9Z1 Gm4846-201ENSMUST00000143922 1744 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Smarcd3Q6P9Z1 Myo5a-201ENSMUST00000123128 11702 ntTSL 5 BASIC10.04□□□□□ -0.8
Smarcd3Q6P9Z1 Pde4c-202ENSMUST00000110095 3290 ntAPPRIS P2 TSL 1 (best) BASIC10.04□□□□□ -0.8
Smarcd3Q6P9Z1 Fam228a-201ENSMUST00000111154 3004 ntAPPRIS P2 TSL 1 (best) BASIC10.04□□□□□ -0.8
Smarcd3Q6P9Z1 Trpm2-203ENSMUST00000105401 7274 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Smarcd3Q6P9Z1 Nos1-206ENSMUST00000142742 10123 ntAPPRIS P2 TSL 5 BASIC10.04□□□□□ -0.8
Smarcd3Q6P9Z1 Optc-205ENSMUST00000153617 1615 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Retrieved 100 of 76,532 protein–RNA pairs in 58.2 ms