Protein–RNA interactions for Protein: Q61602

Gli3, Transcriptional activator GLI3, mousemouse

Predictions only

Length 1,583 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gli3Q61602 Rbm15-201ENSMUST00000061772 4343 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Gli3Q61602 Zbtb4-202ENSMUST00000108639 7811 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Gli3Q61602 Runx3-201ENSMUST00000056977 3884 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Gli3Q61602 Tead4-203ENSMUST00000130454 1718 ntTSL 5 BASIC14.42□□□□□ -0.1
Gli3Q61602 Gm7964-201ENSMUST00000051522 1378 ntBASIC14.42□□□□□ -0.1
Gli3Q61602 Pla2g15-201ENSMUST00000034377 2706 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Gli3Q61602 Rbm48-201ENSMUST00000042753 2368 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Gli3Q61602 Nhsl1-209ENSMUST00000207038 4854 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
Gli3Q61602 Ctsd-201ENSMUST00000066401 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Gli3Q61602 Etfbkmt-202ENSMUST00000111547 1250 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Gli3Q61602 Lypla1-202ENSMUST00000115529 930 ntTSL 2 BASIC14.42□□□□□ -0.1
Gli3Q61602 Gm7180-201ENSMUST00000121753 513 ntBASIC14.42□□□□□ -0.1
Gli3Q61602 Gm14048-201ENSMUST00000121864 1268 ntBASIC14.42□□□□□ -0.1
Gli3Q61602 Cfap77-202ENSMUST00000157048 1042 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Gli3Q61602 Gm16350-201ENSMUST00000162958 446 ntTSL 2 BASIC14.42□□□□□ -0.1
Gli3Q61602 Gm37016-201ENSMUST00000195507 660 ntTSL 5 BASIC14.42□□□□□ -0.1
Gli3Q61602 Gm31363-201ENSMUST00000199362 541 ntTSL 3 BASIC14.42□□□□□ -0.1
Gli3Q61602 Hbq1a-201ENSMUST00000020535 604 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Gli3Q61602 Gm29725-201ENSMUST00000206614 407 ntBASIC14.42□□□□□ -0.1
Gli3Q61602 Irf2bpl-201ENSMUST00000038422 4098 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
Gli3Q61602 Pcdha1-202ENSMUST00000193839 4925 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Gli3Q61602 Tmcc3os-201ENSMUST00000146744 2912 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Gli3Q61602 5830473C10Rik-202ENSMUST00000200765 1691 ntTSL 5 BASIC14.41□□□□□ -0.1
Gli3Q61602 Lrrc4-201ENSMUST00000062304 3615 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
Gli3Q61602 Slc16a2-201ENSMUST00000042664 4152 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Gli3Q61602 Msl2-201ENSMUST00000085177 4889 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Gli3Q61602 Gp2-202ENSMUST00000207887 1853 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Gli3Q61602 Synj2-202ENSMUST00000080283 4793 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Gli3Q61602 AU040320-201ENSMUST00000047431 4384 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Gli3Q61602 Igkv4-55-201ENSMUST00000103359 379 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
Gli3Q61602 Gm15363-201ENSMUST00000118897 631 ntBASIC14.41□□□□□ -0.1
Gli3Q61602 Gm11701-201ENSMUST00000121277 1142 ntBASIC14.41□□□□□ -0.1
Gli3Q61602 1700056N10Rik-201ENSMUST00000141875 1043 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Gli3Q61602 Gm15841-201ENSMUST00000160540 517 ntTSL 3 BASIC14.41□□□□□ -0.1
Gli3Q61602 Spc25-209ENSMUST00000167875 1194 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
Gli3Q61602 Tmem265-202ENSMUST00000190278 587 ntTSL 3 BASIC14.41□□□□□ -0.1
Gli3Q61602 Gm37362-201ENSMUST00000194567 634 ntTSL 5 BASIC14.41□□□□□ -0.1
Gli3Q61602 CT025689.5-201ENSMUST00000224316 986 ntBASIC14.41□□□□□ -0.1
Gli3Q61602 Mif-201ENSMUST00000038169 544 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Gli3Q61602 Rsl24d1-201ENSMUST00000034738 1543 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Gli3Q61602 Gm9951-202ENSMUST00000149618 1772 ntTSL 2 BASIC14.41□□□□□ -0.1
Gli3Q61602 Fgfr1-203ENSMUST00000119398 3789 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Gli3Q61602 Nup62cl-201ENSMUST00000101212 1996 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Gli3Q61602 Clec10a-202ENSMUST00000102571 1496 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
Gli3Q61602 Slc10a3-203ENSMUST00000114146 1902 ntAPPRIS P2 TSL 5 BASIC14.41□□□□□ -0.1
Gli3Q61602 Fam173b-203ENSMUST00000161061 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Gli3Q61602 1700108F19Rik-205ENSMUST00000190818 1412 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Gli3Q61602 Larp7-201ENSMUST00000029588 2121 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
Gli3Q61602 Muc3-201ENSMUST00000041226 1853 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Gli3Q61602 Gm42890-202ENSMUST00000167642 2566 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Gli3Q61602 Fam160a2-202ENSMUST00000074686 3212 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
Gli3Q61602 AU022754-201ENSMUST00000180441 2976 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Gli3Q61602 Parvg-207ENSMUST00000163667 2700 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
Gli3Q61602 Kif2a-202ENSMUST00000117423 2023 ntTSL 5 BASIC14.4□□□□□ -0.1
Gli3Q61602 Hk1-205ENSMUST00000130422 2916 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
Gli3Q61602 D630008O14Rik-201ENSMUST00000144260 1568 ntTSL 2 BASIC14.4□□□□□ -0.1
Gli3Q61602 Sgk1-201ENSMUST00000020145 2456 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Gli3Q61602 Pros1-201ENSMUST00000023629 3303 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Gli3Q61602 Gm43625-201ENSMUST00000199177 1539 ntBASIC14.4□□□□□ -0.1
Gli3Q61602 AC140209.1-203ENSMUST00000227412 1524 ntBASIC14.4□□□□□ -0.1
Gli3Q61602 Vps35-201ENSMUST00000034131 3474 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Gli3Q61602 Lrrc8a-201ENSMUST00000095078 4301 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
Gli3Q61602 Gm9008-201ENSMUST00000097218 2353 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
Gli3Q61602 Rsph14-203ENSMUST00000159994 1728 ntTSL 5 BASIC14.4□□□□□ -0.1
Gli3Q61602 Flywch1-201ENSMUST00000045517 2798 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Gli3Q61602 Tnfrsf21-201ENSMUST00000024708 3626 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Gli3Q61602 Tnni2-201ENSMUST00000105971 732 ntAPPRIS P1 TSL 2 BASIC14.4□□□□□ -0.1
Gli3Q61602 Gm14834-201ENSMUST00000119416 795 ntBASIC14.4□□□□□ -0.1
Gli3Q61602 Gm14156-201ENSMUST00000121538 483 ntBASIC14.4□□□□□ -0.1
Gli3Q61602 Gm15347-201ENSMUST00000145372 385 ntTSL 3 BASIC14.4□□□□□ -0.1
Gli3Q61602 Gm11464-201ENSMUST00000146963 537 ntTSL 5 BASIC14.4□□□□□ -0.1
Gli3Q61602 Msra-204ENSMUST00000210363 1042 ntTSL 5 BASIC14.4□□□□□ -0.1
Gli3Q61602 Gm46328-201ENSMUST00000217924 976 ntTSL 5 BASIC14.4□□□□□ -0.1
Gli3Q61602 CT030732.1-201ENSMUST00000226885 246 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
Gli3Q61602 Gm16907-201ENSMUST00000180734 2317 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Gli3Q61602 Gm26912-201ENSMUST00000180988 1483 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Gli3Q61602 Fbxo40-202ENSMUST00000114806 2518 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Gli3Q61602 Gm14735-201ENSMUST00000121772 3088 ntBASIC14.4□□□□□ -0.1
Gli3Q61602 Gm13361-201ENSMUST00000119977 1431 ntBASIC14.4□□□□□ -0.1
Gli3Q61602 Vamp1-202ENSMUST00000063588 1400 ntTSL 2 BASIC14.4□□□□□ -0.1
Gli3Q61602 Nck1-202ENSMUST00000116522 4476 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Gli3Q61602 Gm9583-201ENSMUST00000219613 1843 ntBASIC14.4□□□□□ -0.1
Gli3Q61602 Chic2-201ENSMUST00000075452 9699 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Gli3Q61602 Myocd-201ENSMUST00000101042 2585 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Gli3Q61602 Esrp1-204ENSMUST00000108313 3696 ntTSL 5 BASIC14.4□□□□□ -0.1
Gli3Q61602 Exoc3l4-209ENSMUST00000222897 2665 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Gli3Q61602 Clec12b-201ENSMUST00000032261 1521 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Gli3Q61602 Rplp2-202ENSMUST00000106003 449 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
Gli3Q61602 Gm9434-201ENSMUST00000118975 813 ntBASIC14.39□□□□□ -0.11
Gli3Q61602 Gm27403-201ENSMUST00000184662 214 ntBASIC14.39□□□□□ -0.11
Gli3Q61602 Gm8369-204ENSMUST00000188633 1227 ntAPPRIS P1 TSL 3 BASIC14.39□□□□□ -0.11
Gli3Q61602 Gm7384-201ENSMUST00000203682 530 ntBASIC14.39□□□□□ -0.11
Gli3Q61602 Gm34358-201ENSMUST00000204585 665 ntTSL 3 BASIC14.39□□□□□ -0.11
Gli3Q61602 Gm30873-201ENSMUST00000207512 1222 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Gli3Q61602 Gm5668-201ENSMUST00000220897 436 ntBASIC14.39□□□□□ -0.11
Gli3Q61602 Gm11361-201ENSMUST00000223428 607 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
Gli3Q61602 Rps6kl1-202ENSMUST00000221972 2881 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Gli3Q61602 Traf3ip3-201ENSMUST00000043550 2122 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Gli3Q61602 Bcl2-202ENSMUST00000189999 2841 ntBASIC14.39□□□□□ -0.11
Gli3Q61602 5730405O15Rik-201ENSMUST00000127521 1749 ntTSL 2 BASIC14.39□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 36.1 ms