Protein–RNA interactions for Protein: Q4FZC9

Syne3, Nesprin-3, mousemouse

Predictions only

Length 975 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Syne3Q4FZC9 Fbxo40-201ENSMUST00000075869 5137 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Syne3Q4FZC9 Ankrd26-201ENSMUST00000112830 6930 ntAPPRIS P1 TSL 5 BASIC11.68□□□□□ -0.54
Syne3Q4FZC9 Sgca-205ENSMUST00000166320 1428 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Syne3Q4FZC9 Pcdhga10-201ENSMUST00000193404 4732 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Syne3Q4FZC9 Ankub1-202ENSMUST00000197088 1854 ntAPPRIS P1 TSL 5 BASIC11.68□□□□□ -0.54
Syne3Q4FZC9 AC174678.2-201ENSMUST00000156420 3275 ntAPPRIS P1 TSL 5 BASIC11.68□□□□□ -0.54
Syne3Q4FZC9 Anks1b-218ENSMUST00000182595 3715 ntTSL 5 BASIC11.68□□□□□ -0.54
Syne3Q4FZC9 Csgalnact1-203ENSMUST00000130214 3029 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Syne3Q4FZC9 Raver1-201ENSMUST00000115487 3470 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Syne3Q4FZC9 Myh13-203ENSMUST00000180845 5991 ntAPPRIS P1 TSL 5 BASIC11.67□□□□□ -0.54
Syne3Q4FZC9 Sept9-205ENSMUST00000106354 3869 ntAPPRIS ALT2 TSL 5 BASIC11.67□□□□□ -0.54
Syne3Q4FZC9 Syn2-202ENSMUST00000169345 3854 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Syne3Q4FZC9 Gal3st4-201ENSMUST00000100530 3162 ntAPPRIS P3 TSL 1 (best) BASIC11.67□□□□□ -0.54
Syne3Q4FZC9 2410002F23Rik-204ENSMUST00000107948 2908 ntAPPRIS P2 TSL 2 BASIC11.67□□□□□ -0.54
Syne3Q4FZC9 4933409D19Rik-201ENSMUST00000193674 1557 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Syne3Q4FZC9 Csnk1g1-214ENSMUST00000206594 2482 ntAPPRIS P2 TSL 5 BASIC11.67□□□□□ -0.54
Syne3Q4FZC9 Mcm2-201ENSMUST00000058011 3371 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Syne3Q4FZC9 Ctsb-201ENSMUST00000006235 4743 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Syne3Q4FZC9 Zfat-205ENSMUST00000162173 3561 ntAPPRIS ALT2 TSL 5 BASIC11.67□□□□□ -0.54
Syne3Q4FZC9 Ptbp3-201ENSMUST00000030076 6855 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Syne3Q4FZC9 Lcorl-205ENSMUST00000121573 2378 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Syne3Q4FZC9 Dpep2-201ENSMUST00000034373 1702 ntAPPRIS P4 TSL 1 (best) BASIC11.67□□□□□ -0.54
Syne3Q4FZC9 Ndor1-201ENSMUST00000100329 4517 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Syne3Q4FZC9 Eps8l1-204ENSMUST00000163893 3868 ntAPPRIS P2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Syne3Q4FZC9 Tceanc-202ENSMUST00000112188 4050 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Syne3Q4FZC9 Thsd4-206ENSMUST00000171654 8522 ntAPPRIS P1 TSL 5 BASIC11.67□□□□□ -0.54
Syne3Q4FZC9 Trmt12-201ENSMUST00000036937 4454 ntAPPRIS P1 BASIC11.67□□□□□ -0.54
Syne3Q4FZC9 Nmt2-201ENSMUST00000081932 4461 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Syne3Q4FZC9 Rplp2-202ENSMUST00000106003 449 ntAPPRIS P1 TSL 2 BASIC11.67□□□□□ -0.54
Syne3Q4FZC9 Ssc4d-202ENSMUST00000111150 459 ntTSL 2 BASIC11.67□□□□□ -0.54
Syne3Q4FZC9 Gm12856-201ENSMUST00000119471 1293 ntBASIC11.67□□□□□ -0.54
Syne3Q4FZC9 Mup-ps29-201ENSMUST00000122281 202 ntBASIC11.67□□□□□ -0.54
Syne3Q4FZC9 Gm11789-203ENSMUST00000140645 737 ntTSL 2 BASIC11.67□□□□□ -0.54
Syne3Q4FZC9 Gstt3-203ENSMUST00000173537 687 ntTSL 3 BASIC11.67□□□□□ -0.54
Syne3Q4FZC9 Gm21778-201ENSMUST00000178779 471 ntBASIC11.67□□□□□ -0.54
Syne3Q4FZC9 9930004E17Rik-201ENSMUST00000180031 498 ntBASIC11.67□□□□□ -0.54
Syne3Q4FZC9 Gm37905-201ENSMUST00000195310 341 ntBASIC11.67□□□□□ -0.54
Syne3Q4FZC9 Gm45682-201ENSMUST00000209434 1256 ntTSL 5 BASIC11.67□□□□□ -0.54
Syne3Q4FZC9 AC159002.1-201ENSMUST00000226714 924 ntBASIC11.67□□□□□ -0.54
Syne3Q4FZC9 Olfr284-201ENSMUST00000063289 918 ntAPPRIS P1 BASIC11.67□□□□□ -0.54
Syne3Q4FZC9 Fpr-rs3-201ENSMUST00000071189 1032 ntAPPRIS P1 BASIC11.67□□□□□ -0.54
Syne3Q4FZC9 Ifnab-201ENSMUST00000071378 1058 ntAPPRIS P1 BASIC11.67□□□□□ -0.54
Syne3Q4FZC9 Gm10020-201ENSMUST00000081993 612 ntBASIC11.67□□□□□ -0.54
Syne3Q4FZC9 Krtap6-2-201ENSMUST00000082065 786 ntAPPRIS P1 BASIC11.67□□□□□ -0.54
Syne3Q4FZC9 Fbxo43-201ENSMUST00000058643 4035 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Syne3Q4FZC9 Zfp114-203ENSMUST00000206547 3154 ntAPPRIS P2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Syne3Q4FZC9 Slco2a1-201ENSMUST00000035148 7122 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Syne3Q4FZC9 Corin-207ENSMUST00000177290 2943 ntAPPRIS ALT2 TSL 5 BASIC11.67□□□□□ -0.54
Syne3Q4FZC9 Zfp354b-201ENSMUST00000109124 2455 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Syne3Q4FZC9 Asb6-201ENSMUST00000041726 4147 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Syne3Q4FZC9 Mdm1-201ENSMUST00000020437 3074 ntAPPRIS P3 TSL 1 (best) BASIC11.67□□□□□ -0.54
Syne3Q4FZC9 Mobp-202ENSMUST00000093773 3286 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Syne3Q4FZC9 Wdr31-202ENSMUST00000107452 1437 ntAPPRIS ALT1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Syne3Q4FZC9 Rbm47-205ENSMUST00000167950 4895 ntAPPRIS P3 TSL 1 (best) BASIC11.67□□□□□ -0.54
Syne3Q4FZC9 Gm4900-201ENSMUST00000222046 1628 ntBASIC11.67□□□□□ -0.54
Syne3Q4FZC9 Stard4-201ENSMUST00000025236 5097 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Syne3Q4FZC9 AC155245.1-201ENSMUST00000222266 1804 ntBASIC11.67□□□□□ -0.54
Syne3Q4FZC9 Unc5cl-201ENSMUST00000074574 2838 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Syne3Q4FZC9 Mefv-202ENSMUST00000100222 3249 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Syne3Q4FZC9 Calu-201ENSMUST00000031779 3229 ntAPPRIS P5 TSL 1 (best) BASIC11.67□□□□□ -0.54
Syne3Q4FZC9 Nedd9-202ENSMUST00000163623 4626 ntAPPRIS P3 TSL 1 (best) BASIC11.67□□□□□ -0.54
Syne3Q4FZC9 Smtn-210ENSMUST00000170588 3386 ntAPPRIS P2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Syne3Q4FZC9 Mpv17l-204ENSMUST00000141971 2155 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Syne3Q4FZC9 Tubb2b-201ENSMUST00000075774 2182 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Syne3Q4FZC9 Nfe2l1-212ENSMUST00000169828 3530 ntTSL 2 BASIC11.66□□□□□ -0.54
Syne3Q4FZC9 Colec12-201ENSMUST00000040069 3322 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Syne3Q4FZC9 Smok3a-201ENSMUST00000085886 2723 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Syne3Q4FZC9 Tnpo3-201ENSMUST00000012679 4251 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Syne3Q4FZC9 Gtf3c6-206ENSMUST00000217537 2526 ntAPPRIS P2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Syne3Q4FZC9 Tasp1-202ENSMUST00000099304 2127 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Syne3Q4FZC9 Madd-204ENSMUST00000077941 5990 ntAPPRIS ALT2 TSL 2 BASIC11.66□□□□□ -0.54
Syne3Q4FZC9 Madd-205ENSMUST00000099723 5977 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Syne3Q4FZC9 Slc10a3-203ENSMUST00000114146 1902 ntAPPRIS P2 TSL 5 BASIC11.66□□□□□ -0.54
Syne3Q4FZC9 Rab11fip2-202ENSMUST00000170819 1539 ntAPPRIS P1 TSL 5 BASIC11.66□□□□□ -0.54
Syne3Q4FZC9 Camk1g-201ENSMUST00000016323 2469 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Syne3Q4FZC9 A230077H06Rik-202ENSMUST00000189574 2477 ntTSL 2 BASIC11.66□□□□□ -0.54
Syne3Q4FZC9 Vwa5b2-202ENSMUST00000096197 4527 ntAPPRIS ALT2 TSL 5 BASIC11.66□□□□□ -0.54
Syne3Q4FZC9 Cep350-204ENSMUST00000138762 13307 ntAPPRIS P1 TSL 5 BASIC11.66□□□□□ -0.54
Syne3Q4FZC9 Rad51b-202ENSMUST00000171210 1858 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Syne3Q4FZC9 Fam198b-202ENSMUST00000118853 6729 ntAPPRIS P1 TSL 5 BASIC11.66□□□□□ -0.54
Syne3Q4FZC9 Abca2-201ENSMUST00000102919 8033 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Syne3Q4FZC9 Atf7ip2-201ENSMUST00000044005 2778 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Syne3Q4FZC9 Slc12a8-203ENSMUST00000119173 2382 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Syne3Q4FZC9 Cfap100-204ENSMUST00000134224 849 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Syne3Q4FZC9 Gad1-207ENSMUST00000148210 1021 ntTSL 5 BASIC11.66□□□□□ -0.54
Syne3Q4FZC9 Gm24992-201ENSMUST00000157412 130 ntBASIC11.66□□□□□ -0.54
Syne3Q4FZC9 Bhmt-ps1-201ENSMUST00000178743 1224 ntBASIC11.66□□□□□ -0.54
Syne3Q4FZC9 Smlr1-201ENSMUST00000179685 669 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Syne3Q4FZC9 Ly6c1-202ENSMUST00000179762 838 ntAPPRIS P3 TSL 1 (best) BASIC11.66□□□□□ -0.54
Syne3Q4FZC9 Calm5-202ENSMUST00000184271 423 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Syne3Q4FZC9 Mrip-ps-201ENSMUST00000184613 940 ntBASIC11.66□□□□□ -0.54
Syne3Q4FZC9 Gm28306-201ENSMUST00000191315 529 ntTSL 5 BASIC11.66□□□□□ -0.54
Syne3Q4FZC9 Gm37458-201ENSMUST00000194055 410 ntBASIC11.66□□□□□ -0.54
Syne3Q4FZC9 Gm43520-201ENSMUST00000197996 164 ntBASIC11.66□□□□□ -0.54
Syne3Q4FZC9 Gm43692-201ENSMUST00000198236 1062 ntBASIC11.66□□□□□ -0.54
Syne3Q4FZC9 Gm44126-201ENSMUST00000204831 514 ntBASIC11.66□□□□□ -0.54
Syne3Q4FZC9 Itgax-203ENSMUST00000205460 1215 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Syne3Q4FZC9 Gm40709-203ENSMUST00000219695 973 ntTSL 5 BASIC11.66□□□□□ -0.54
Syne3Q4FZC9 AC155712.2-201ENSMUST00000220398 643 ntTSL 3 BASIC11.66□□□□□ -0.54
Syne3Q4FZC9 Gm36423-202ENSMUST00000222215 1298 ntTSL 5 BASIC11.66□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 46 ms