Protein–RNA interactions for Protein: Q07802

Ebf1, Transcription factor COE1, mousemouse

Predictions only

Length 591 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ebf1Q07802 Arhgef28-201ENSMUST00000109426 5387 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Ebf1Q07802 Gm38194-201ENSMUST00000194529 2211 ntBASIC11.19□□□□□ -0.62
Ebf1Q07802 Gprc5d-202ENSMUST00000111922 1317 ntAPPRIS P3 TSL 1 (best) BASIC11.19□□□□□ -0.62
Ebf1Q07802 Ablim2-206ENSMUST00000114206 3528 ntAPPRIS ALT2 TSL 5 BASIC11.19□□□□□ -0.62
Ebf1Q07802 Raver1-201ENSMUST00000115487 3470 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Ebf1Q07802 Khnyn-201ENSMUST00000022831 3898 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Ebf1Q07802 Hmgn2-201ENSMUST00000100472 881 ntAPPRIS ALT1 TSL 2 BASIC11.19□□□□□ -0.62
Ebf1Q07802 Gm22937-201ENSMUST00000103954 131 ntBASIC11.19□□□□□ -0.62
Ebf1Q07802 Styxl1-203ENSMUST00000111162 726 ntTSL 5 BASIC11.19□□□□□ -0.62
Ebf1Q07802 Gm9133-201ENSMUST00000118289 540 ntBASIC11.19□□□□□ -0.62
Ebf1Q07802 Snrnp25-202ENSMUST00000121182 659 ntAPPRIS ALT2 TSL 3 BASIC11.19□□□□□ -0.62
Ebf1Q07802 Gm13707-201ENSMUST00000123663 600 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Ebf1Q07802 Ndufb5-204ENSMUST00000127477 1079 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Ebf1Q07802 Olfml3-204ENSMUST00000169286 874 ntBASIC11.19□□□□□ -0.62
Ebf1Q07802 Prr3-206ENSMUST00000173585 770 ntAPPRIS ALT2 TSL 2 BASIC11.19□□□□□ -0.62
Ebf1Q07802 Abhd14a-204ENSMUST00000185334 1109 ntAPPRIS P1 TSL 5 BASIC11.19□□□□□ -0.62
Ebf1Q07802 Gm5267-201ENSMUST00000191574 1045 ntBASIC11.19□□□□□ -0.62
Ebf1Q07802 Gm44953-201ENSMUST00000208745 1286 ntBASIC11.19□□□□□ -0.62
Ebf1Q07802 Il18-203ENSMUST00000213916 885 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Ebf1Q07802 Dennd1c-201ENSMUST00000011623 2520 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Ebf1Q07802 AC160411.1-201ENSMUST00000218544 4560 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Ebf1Q07802 Gm5124-202ENSMUST00000132683 2083 ntBASIC11.19□□□□□ -0.62
Ebf1Q07802 Fga-201ENSMUST00000029630 2083 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Ebf1Q07802 Kpna7-202ENSMUST00000110673 2453 ntAPPRIS ALT2 TSL 5 BASIC11.19□□□□□ -0.62
Ebf1Q07802 Abhd18-203ENSMUST00000159774 4455 ntAPPRIS P1 TSL 5 BASIC11.19□□□□□ -0.62
Ebf1Q07802 Myo15b-201ENSMUST00000040703 2825 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Ebf1Q07802 Tiam1-214ENSMUST00000164263 3569 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Ebf1Q07802 Ctcfl-202ENSMUST00000179693 3174 ntAPPRIS P1 TSL 5 BASIC11.19□□□□□ -0.62
Ebf1Q07802 Prf1-201ENSMUST00000035419 1968 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Ebf1Q07802 Creb3l4-201ENSMUST00000029547 1553 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Ebf1Q07802 Gm43064-201ENSMUST00000199710 3144 ntAPPRIS P1 TSL 2 BASIC11.19□□□□□ -0.62
Ebf1Q07802 Nnt-201ENSMUST00000069902 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC11.19□□□□□ -0.62
Ebf1Q07802 Ffar2-201ENSMUST00000053156 2301 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Ebf1Q07802 Pck1-201ENSMUST00000029017 2661 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Ebf1Q07802 Galntl6-208ENSMUST00000204128 5680 ntAPPRIS P1 TSL 5 BASIC11.19□□□□□ -0.62
Ebf1Q07802 Nsd3-210ENSMUST00000153597 1865 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Ebf1Q07802 Snx13-202ENSMUST00000163677 3681 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Ebf1Q07802 Mpl-202ENSMUST00000102671 2934 ntAPPRIS P3 TSL 1 (best) BASIC11.19□□□□□ -0.62
Ebf1Q07802 Socs6-202ENSMUST00000123826 2921 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Ebf1Q07802 Ctif-201ENSMUST00000165559 6173 ntAPPRIS P1 TSL 5 BASIC11.18□□□□□ -0.62
Ebf1Q07802 Acnat2-202ENSMUST00000107698 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC11.18□□□□□ -0.62
Ebf1Q07802 Tpd52l2-202ENSMUST00000069712 1799 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Ebf1Q07802 Mrvi1-202ENSMUST00000125758 5953 ntAPPRIS ALT2 TSL 2 BASIC11.18□□□□□ -0.62
Ebf1Q07802 Mroh8-202ENSMUST00000143663 3460 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Ebf1Q07802 Pde4b-203ENSMUST00000097950 2756 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Ebf1Q07802 Gadl1-202ENSMUST00000119291 1729 ntAPPRIS ALT2 TSL 1 (best) BASIC11.18□□□□□ -0.62
Ebf1Q07802 Olfr1413-202ENSMUST00000214239 1724 ntAPPRIS P1 TSL 5 BASIC11.18□□□□□ -0.62
Ebf1Q07802 Ceacam9-201ENSMUST00000001984 1396 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Ebf1Q07802 Btg2-201ENSMUST00000020692 2743 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Ebf1Q07802 Rimbp2-204ENSMUST00000198941 6446 ntAPPRIS P3 TSL 2 BASIC11.18□□□□□ -0.62
Ebf1Q07802 Pla2g4c-201ENSMUST00000043612 3382 ntAPPRIS P3 TSL 1 (best) BASIC11.18□□□□□ -0.62
Ebf1Q07802 Ctr9-201ENSMUST00000005749 4300 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Ebf1Q07802 Cep76-201ENSMUST00000097542 3979 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Ebf1Q07802 Shank2-202ENSMUST00000105900 8169 ntTSL 5 BASIC11.18□□□□□ -0.62
Ebf1Q07802 Ighv1-50-201ENSMUST00000103521 390 ntAPPRIS P1 BASIC11.18□□□□□ -0.62
Ebf1Q07802 Gm23745-201ENSMUST00000104230 125 ntBASIC11.18□□□□□ -0.62
Ebf1Q07802 Gm14716-201ENSMUST00000120138 718 ntBASIC11.18□□□□□ -0.62
Ebf1Q07802 Gm5555-201ENSMUST00000120352 1111 ntBASIC11.18□□□□□ -0.62
Ebf1Q07802 Gm11634-201ENSMUST00000154147 755 ntAPPRIS ALT2 TSL 3 BASIC11.18□□□□□ -0.62
Ebf1Q07802 Fxyd5-203ENSMUST00000159924 805 ntAPPRIS P3 TSL 5 BASIC11.18□□□□□ -0.62
Ebf1Q07802 Fxyd5-210ENSMUST00000162116 817 ntAPPRIS P3 TSL 5 BASIC11.18□□□□□ -0.62
Ebf1Q07802 Gm17221-201ENSMUST00000163909 481 ntBASIC11.18□□□□□ -0.62
Ebf1Q07802 Gm5529-201ENSMUST00000165691 891 ntBASIC11.18□□□□□ -0.62
Ebf1Q07802 Gm17073-201ENSMUST00000168069 556 ntBASIC11.18□□□□□ -0.62
Ebf1Q07802 Stx5a-219ENSMUST00000177373 995 ntTSL 5 BASIC11.18□□□□□ -0.62
Ebf1Q07802 Gm5342-201ENSMUST00000181982 1003 ntBASIC11.18□□□□□ -0.62
Ebf1Q07802 1700088E04Rik-211ENSMUST00000190730 691 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Ebf1Q07802 2410002F23Rik-220ENSMUST00000191537 872 ntAPPRIS ALT2 TSL 5 BASIC11.18□□□□□ -0.62
Ebf1Q07802 4930431F10Rik-201ENSMUST00000213122 1157 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Ebf1Q07802 AC122891.1-201ENSMUST00000218671 268 ntBASIC11.18□□□□□ -0.62
Ebf1Q07802 Gstz1-203ENSMUST00000220574 971 ntTSL 2 BASIC11.18□□□□□ -0.62
Ebf1Q07802 B230303A05Rik-204ENSMUST00000223006 748 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Ebf1Q07802 Rnf181-202ENSMUST00000069595 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC11.18□□□□□ -0.62
Ebf1Q07802 Aven-202ENSMUST00000099588 791 ntAPPRIS ALT2 TSL 3 BASIC11.18□□□□□ -0.62
Ebf1Q07802 Gm37122-201ENSMUST00000195313 1567 ntBASIC11.18□□□□□ -0.62
Ebf1Q07802 Cd6-202ENSMUST00000039043 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC11.18□□□□□ -0.62
Ebf1Q07802 Slc5a8-201ENSMUST00000020255 5331 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Ebf1Q07802 B230317F23Rik-201ENSMUST00000052189 2472 ntBASIC11.18□□□□□ -0.62
Ebf1Q07802 Akap10-203ENSMUST00000108710 3394 ntTSL 2 BASIC11.18□□□□□ -0.62
Ebf1Q07802 Ctnnal1-201ENSMUST00000045142 3664 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Ebf1Q07802 Idi1-201ENSMUST00000169314 3027 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Ebf1Q07802 Ddx46-201ENSMUST00000099479 5664 ntAPPRIS ALT2 TSL 5 BASIC11.18□□□□□ -0.62
Ebf1Q07802 Rprd1b-203ENSMUST00000109518 4399 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Ebf1Q07802 Dync1i2-201ENSMUST00000081710 2631 ntAPPRIS P3 TSL 1 (best) BASIC11.18□□□□□ -0.62
Ebf1Q07802 Rsc1a1-201ENSMUST00000105782 1749 ntAPPRIS P1 BASIC11.18□□□□□ -0.62
Ebf1Q07802 Hgs-203ENSMUST00000106205 2898 ntAPPRIS ALT2 TSL 5 BASIC11.18□□□□□ -0.62
Ebf1Q07802 Dmbt1-202ENSMUST00000208311 6272 ntAPPRIS ALT2 TSL 1 (best) BASIC11.18□□□□□ -0.62
Ebf1Q07802 Atp1a3-201ENSMUST00000080882 3621 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Ebf1Q07802 Tacc2-217ENSMUST00000209108 3310 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Ebf1Q07802 Smap1-202ENSMUST00000129254 1365 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Ebf1Q07802 Gm5308-201ENSMUST00000196752 1354 ntBASIC11.17□□□□□ -0.62
Ebf1Q07802 Lrp12-201ENSMUST00000022916 4109 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Ebf1Q07802 Ccdc96-201ENSMUST00000060100 3585 ntAPPRIS P1 BASIC11.17□□□□□ -0.62
Ebf1Q07802 Cish-204ENSMUST00000168260 2742 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Ebf1Q07802 Serpinf2-201ENSMUST00000043696 2192 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Ebf1Q07802 Dzip1l-202ENSMUST00000112884 3791 ntAPPRIS ALT2 TSL 5 BASIC11.17□□□□□ -0.62
Ebf1Q07802 Ntrk3-205ENSMUST00000193002 2678 ntAPPRIS ALT2 TSL 5 BASIC11.17□□□□□ -0.62
Ebf1Q07802 Eid3-201ENSMUST00000211623 1305 ntAPPRIS P1 BASIC11.17□□□□□ -0.62
Ebf1Q07802 Nnt-203ENSMUST00000109204 3198 ntTSL 5 BASIC11.17□□□□□ -0.62
Ebf1Q07802 Rbm10-205ENSMUST00000115375 3698 ntAPPRIS ALT2 TSL 1 (best) BASIC11.17□□□□□ -0.62
Retrieved 100 of 76,532 protein–RNA pairs in 38.3 ms