Protein–RNA interactions for Protein: P52946

Pdx1, Pancreas/duodenum homeobox protein 1, mousemouse

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdx1P52946 Gm10436-202ENSMUST00000220521 1788 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Pdx1P52946 Bmp3-203ENSMUST00000200388 6609 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Pdx1P52946 Tmem88b-201ENSMUST00000097742 3471 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Pdx1P52946 Ddr1-212ENSMUST00000166980 3627 ntAPPRIS P3 TSL 1 (best) BASIC10.84□□□□□ -0.67
Pdx1P52946 Hap1-202ENSMUST00000138603 3316 ntAPPRIS ALT2 TSL 5 BASIC10.84□□□□□ -0.67
Pdx1P52946 Tmem184b-202ENSMUST00000178522 3314 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Pdx1P52946 D2hgdh-201ENSMUST00000097633 3232 ntAPPRIS P3 TSL 1 (best) BASIC10.84□□□□□ -0.67
Pdx1P52946 Kcnh6-202ENSMUST00000106903 2816 ntTSL 5 BASIC10.84□□□□□ -0.67
Pdx1P52946 Cd6-202ENSMUST00000039043 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Pdx1P52946 Tctn3-201ENSMUST00000025981 2743 ntAPPRIS P2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Pdx1P52946 Cap1-201ENSMUST00000069533 2620 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Pdx1P52946 Lax1-201ENSMUST00000169295 2309 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Pdx1P52946 Mphosph10-201ENSMUST00000032735 2248 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Pdx1P52946 Gm44415-201ENSMUST00000204151 2112 ntBASIC10.84□□□□□ -0.67
Pdx1P52946 Gm5833-202ENSMUST00000190707 1932 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Pdx1P52946 A230009B12Rik-202ENSMUST00000159602 1810 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Pdx1P52946 Fam180a-201ENSMUST00000051176 1606 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Pdx1P52946 Aldoa-202ENSMUST00000087566 1549 ntTSL 5 BASIC10.84□□□□□ -0.67
Pdx1P52946 Meikin-201ENSMUST00000094193 1433 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Pdx1P52946 Wipf2-201ENSMUST00000037480 7011 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Pdx1P52946 Pde5a-201ENSMUST00000066728 6939 ntAPPRIS P2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Pdx1P52946 Matn2-205ENSMUST00000227759 3569 ntAPPRIS ALT2 BASIC10.83□□□□□ -0.67
Pdx1P52946 Grhl1-202ENSMUST00000085553 3469 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.67
Pdx1P52946 Plpp3-201ENSMUST00000064139 3159 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Pdx1P52946 Smarca2-209ENSMUST00000176030 5862 ntAPPRIS ALT2 TSL 5 BASIC10.83□□□□□ -0.68
Pdx1P52946 Sptbn5-204ENSMUST00000156159 3625 ntAPPRIS P1 TSL 5 BASIC10.83□□□□□ -0.68
Pdx1P52946 Satb1-208ENSMUST00000144331 6243 ntAPPRIS P2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Pdx1P52946 Mtss1l-205ENSMUST00000144041 3225 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Pdx1P52946 Gm45234-201ENSMUST00000129411 4359 ntAPPRIS P1 TSL 2 BASIC10.83□□□□□ -0.68
Pdx1P52946 Sh3d21-201ENSMUST00000094760 1859 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Pdx1P52946 Mecomos-201ENSMUST00000125611 5510 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Pdx1P52946 Ncstn-201ENSMUST00000003550 2901 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Pdx1P52946 Nckap5-212ENSMUST00000162877 2630 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Pdx1P52946 Myo7a-201ENSMUST00000084979 6849 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Pdx1P52946 Rnf144b-201ENSMUST00000068891 4640 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Pdx1P52946 Lypd6-202ENSMUST00000112712 3495 ntAPPRIS P1 TSL 5 BASIC10.83□□□□□ -0.68
Pdx1P52946 Slc25a51-201ENSMUST00000107796 4433 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Pdx1P52946 Gm19027-201ENSMUST00000187291 1355 ntBASIC10.83□□□□□ -0.68
Pdx1P52946 Dnajb12-204ENSMUST00000146590 3070 ntAPPRIS P2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Pdx1P52946 Gm10961-201ENSMUST00000106703 144 ntAPPRIS P1 TSL 5 BASIC10.83□□□□□ -0.68
Pdx1P52946 Rps9-204ENSMUST00000108625 914 ntAPPRIS P1 TSL 2 BASIC10.83□□□□□ -0.68
Pdx1P52946 Bri3-202ENSMUST00000110695 669 ntTSL 2 BASIC10.83□□□□□ -0.68
Pdx1P52946 Sgcg-202ENSMUST00000121148 1298 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Pdx1P52946 4930571N24Rik-202ENSMUST00000142914 598 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Pdx1P52946 Gm15978-201ENSMUST00000161043 738 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Pdx1P52946 Gm8705-201ENSMUST00000180823 812 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Pdx1P52946 Rpain-201ENSMUST00000018593 1100 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Pdx1P52946 1700008A23Rik-201ENSMUST00000191694 691 ntBASIC10.83□□□□□ -0.68
Pdx1P52946 Gm42655-201ENSMUST00000202782 1134 ntBASIC10.83□□□□□ -0.68
Pdx1P52946 AC159462.1-201ENSMUST00000214822 687 ntTSL 5 BASIC10.83□□□□□ -0.68
Pdx1P52946 Gm9139-201ENSMUST00000218817 700 ntBASIC10.83□□□□□ -0.68
Pdx1P52946 Gm12216-207ENSMUST00000220191 1073 ntAPPRIS P5 TSL 5 BASIC10.83□□□□□ -0.68
Pdx1P52946 AC154435.1-201ENSMUST00000223938 959 ntBASIC10.83□□□□□ -0.68
Pdx1P52946 Pbp2-201ENSMUST00000050471 1279 ntAPPRIS P1 BASIC10.83□□□□□ -0.68
Pdx1P52946 Olfr71-201ENSMUST00000055401 939 ntAPPRIS P1 BASIC10.83□□□□□ -0.68
Pdx1P52946 Tmem220-202ENSMUST00000079077 1147 ntAPPRIS P3 TSL 1 (best) BASIC10.83□□□□□ -0.68
Pdx1P52946 Gm25125-201ENSMUST00000083340 136 ntBASIC10.83□□□□□ -0.68
Pdx1P52946 Olfr553-201ENSMUST00000098222 981 ntAPPRIS P1 BASIC10.83□□□□□ -0.68
Pdx1P52946 Atp1a3-205ENSMUST00000196684 3642 ntTSL 5 BASIC10.83□□□□□ -0.68
Pdx1P52946 Trim23-203ENSMUST00000069187 3546 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Pdx1P52946 Ift46-201ENSMUST00000002099 4169 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Pdx1P52946 Csf1r-202ENSMUST00000115268 4701 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Pdx1P52946 Ackr2-202ENSMUST00000214340 3015 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Pdx1P52946 Tube1-201ENSMUST00000019991 2929 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Pdx1P52946 Vasn-201ENSMUST00000038770 2829 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Pdx1P52946 Gm16677-201ENSMUST00000181229 2174 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Pdx1P52946 Gm27174-201ENSMUST00000184493 2174 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Pdx1P52946 Tarm1-203ENSMUST00000203821 1535 ntAPPRIS P2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Pdx1P52946 Pdzk1-203ENSMUST00000107070 2711 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Pdx1P52946 Pcdh12-203ENSMUST00000194012 2702 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Pdx1P52946 Prx-201ENSMUST00000065487 4497 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Pdx1P52946 Shc1-210ENSMUST00000191485 3154 ntAPPRIS P3 TSL 1 (best) BASIC10.83□□□□□ -0.68
Pdx1P52946 Gm45449-201ENSMUST00000211485 1960 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Pdx1P52946 Gm10614-201ENSMUST00000181414 2538 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Pdx1P52946 Gm4869-201ENSMUST00000197549 2955 ntAPPRIS P1 TSL 5 BASIC10.83□□□□□ -0.68
Pdx1P52946 Gm6768-201ENSMUST00000022467 1878 ntBASIC10.83□□□□□ -0.68
Pdx1P52946 Slurp1-202ENSMUST00000190433 2859 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Pdx1P52946 Zfp384-204ENSMUST00000088308 2875 ntAPPRIS P2 TSL 5 BASIC10.83□□□□□ -0.68
Pdx1P52946 Hnrnph2-205ENSMUST00000113203 2315 ntAPPRIS P1 TSL 5 BASIC10.83□□□□□ -0.68
Pdx1P52946 Gm26672-201ENSMUST00000180922 2685 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Pdx1P52946 4933409D19Rik-201ENSMUST00000193674 1557 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Pdx1P52946 Megf8-201ENSMUST00000128119 10040 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Pdx1P52946 Eps8l1-204ENSMUST00000163893 3868 ntAPPRIS P2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Pdx1P52946 Baiap3-206ENSMUST00000182825 3862 ntAPPRIS ALT2 TSL 5 BASIC10.82□□□□□ -0.68
Pdx1P52946 Nin-201ENSMUST00000021468 6708 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Pdx1P52946 5530401A14Rik-201ENSMUST00000021044 1836 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Pdx1P52946 Col6a6-203ENSMUST00000166431 7098 ntAPPRIS ALT2 TSL 5 BASIC10.82□□□□□ -0.68
Pdx1P52946 Ncor2-202ENSMUST00000086083 8575 ntAPPRIS P2 TSL 5 BASIC10.82□□□□□ -0.68
Pdx1P52946 Oprm1-222ENSMUST00000135502 1363 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Pdx1P52946 Ece1-201ENSMUST00000102518 4816 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Pdx1P52946 Dcun1d2-204ENSMUST00000110840 2853 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Pdx1P52946 Slc13a5-202ENSMUST00000137701 1746 ntTSL 5 BASIC10.82□□□□□ -0.68
Pdx1P52946 Eef2k-201ENSMUST00000047875 6580 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Pdx1P52946 Tbc1d14-202ENSMUST00000124036 2765 ntTSL 5 BASIC10.82□□□□□ -0.68
Pdx1P52946 2300003K06Rik-201ENSMUST00000105054 1265 ntAPPRIS P1 BASIC10.82□□□□□ -0.68
Pdx1P52946 Ndufs5-203ENSMUST00000106207 680 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Pdx1P52946 Oprl1-204ENSMUST00000108767 1248 ntAPPRIS P3 TSL 1 (best) BASIC10.82□□□□□ -0.68
Pdx1P52946 Gm14270-201ENSMUST00000118388 846 ntBASIC10.82□□□□□ -0.68
Pdx1P52946 Gm9673-201ENSMUST00000119287 781 ntBASIC10.82□□□□□ -0.68
Pdx1P52946 Gm14665-201ENSMUST00000122294 557 ntBASIC10.82□□□□□ -0.68
Retrieved 100 of 76,532 protein–RNA pairs in 44.5 ms