Protein–RNA interactions for Protein: P40240

Cd9, CD9 antigen, mousemouse

Predictions only

Length 226 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd9P40240 March1-207ENSMUST00000110258 2581 ntAPPRIS ALT1 TSL 5 BASIC10.84□□□□□ -0.67
Cd9P40240 Krt75-201ENSMUST00000042957 3266 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Cd9P40240 C2cd5-203ENSMUST00000171349 4292 ntAPPRIS P1 TSL 5 BASIC10.84□□□□□ -0.67
Cd9P40240 Ahnak2-201ENSMUST00000101010 2821 ntAPPRIS ALT2 BASIC10.84□□□□□ -0.67
Cd9P40240 Colq-201ENSMUST00000112027 2837 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Cd9P40240 Slc35a4-206ENSMUST00000186538 2842 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Cd9P40240 Gm10652-201ENSMUST00000199790 2622 ntBASIC10.84□□□□□ -0.67
Cd9P40240 Spns3-201ENSMUST00000021154 1804 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Cd9P40240 Vangl1-208ENSMUST00000168312 1740 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Cd9P40240 Gm43052-201ENSMUST00000201451 1628 ntBASIC10.84□□□□□ -0.67
Cd9P40240 Krt34-201ENSMUST00000056362 1609 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Cd9P40240 Aldoa-201ENSMUST00000032934 1511 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Cd9P40240 Sparc-209ENSMUST00000216313 1304 ntAPPRIS ALT2 TSL 5 BASIC10.84□□□□□ -0.67
Cd9P40240 Mobp-202ENSMUST00000093773 3286 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.67
Cd9P40240 Cage1-203ENSMUST00000110233 2875 ntAPPRIS P1 TSL 5 BASIC10.83□□□□□ -0.68
Cd9P40240 Msh5-201ENSMUST00000007250 2886 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Cd9P40240 Kpna7-202ENSMUST00000110673 2453 ntAPPRIS ALT2 TSL 5 BASIC10.83□□□□□ -0.68
Cd9P40240 Plekhg5-202ENSMUST00000105661 3842 ntAPPRIS P2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Cd9P40240 Tasp1-203ENSMUST00000110079 2258 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Cd9P40240 Rtn4ip1-202ENSMUST00000105492 2059 ntTSL 3 BASIC10.83□□□□□ -0.68
Cd9P40240 Myo1b-201ENSMUST00000018561 4767 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Cd9P40240 Rin1-201ENSMUST00000025818 4184 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Cd9P40240 Gm44106-201ENSMUST00000203153 1599 ntBASIC10.83□□□□□ -0.68
Cd9P40240 Mrrf-201ENSMUST00000028250 2623 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Cd9P40240 Gm26686-201ENSMUST00000181951 3467 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Cd9P40240 Dgcr8-201ENSMUST00000009321 4320 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Cd9P40240 Cyp2s1-202ENSMUST00000108395 3161 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Cd9P40240 Arhgap11a-202ENSMUST00000110947 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Cd9P40240 Ccpg1-201ENSMUST00000037977 3151 ntAPPRIS P3 TSL 1 (best) BASIC10.83□□□□□ -0.68
Cd9P40240 Gm26013-201ENSMUST00000104404 119 ntBASIC10.83□□□□□ -0.68
Cd9P40240 Krtap4-9-201ENSMUST00000105059 1059 ntAPPRIS P1 BASIC10.83□□□□□ -0.68
Cd9P40240 Gm12516-201ENSMUST00000120819 385 ntBASIC10.83□□□□□ -0.68
Cd9P40240 4930589P08Rik-201ENSMUST00000129097 1084 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Cd9P40240 Smim6-201ENSMUST00000132961 978 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Cd9P40240 Pet100-201ENSMUST00000156380 1193 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Cd9P40240 Gm24398-201ENSMUST00000157870 109 ntBASIC10.83□□□□□ -0.68
Cd9P40240 Gm16226-204ENSMUST00000162639 423 ntTSL 3 BASIC10.83□□□□□ -0.68
Cd9P40240 Tmem40-206ENSMUST00000170625 843 ntAPPRIS ALT2 TSL 3 BASIC10.83□□□□□ -0.68
Cd9P40240 Gm16755-201ENSMUST00000180595 933 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Cd9P40240 Tmem108-203ENSMUST00000189066 2145 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Cd9P40240 Use1-201ENSMUST00000019169 854 ntAPPRIS P3 TSL 1 (best) BASIC10.83□□□□□ -0.68
Cd9P40240 Gm17877-201ENSMUST00000192578 814 ntBASIC10.83□□□□□ -0.68
Cd9P40240 Gm38324-201ENSMUST00000194390 411 ntTSL 3 BASIC10.83□□□□□ -0.68
Cd9P40240 Gm44329-201ENSMUST00000197469 112 ntBASIC10.83□□□□□ -0.68
Cd9P40240 Gm42997-202ENSMUST00000200321 985 ntBASIC10.83□□□□□ -0.68
Cd9P40240 Gm3289-201ENSMUST00000200819 756 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Cd9P40240 Gm44759-201ENSMUST00000206057 430 ntTSL 3 BASIC10.83□□□□□ -0.68
Cd9P40240 Gm45118-201ENSMUST00000208928 825 ntBASIC10.83□□□□□ -0.68
Cd9P40240 Gm4811-201ENSMUST00000220879 1220 ntBASIC10.83□□□□□ -0.68
Cd9P40240 Gm1000-202ENSMUST00000222329 757 ntTSL 5 BASIC10.83□□□□□ -0.68
Cd9P40240 AC165154.1-201ENSMUST00000226661 340 ntBASIC10.83□□□□□ -0.68
Cd9P40240 BX649293.1-201ENSMUST00000227437 631 ntBASIC10.83□□□□□ -0.68
Cd9P40240 Olfr284-201ENSMUST00000063289 918 ntAPPRIS P1 BASIC10.83□□□□□ -0.68
Cd9P40240 Slc4a8-204ENSMUST00000162049 3532 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Cd9P40240 Nfe2l1-212ENSMUST00000169828 3530 ntTSL 2 BASIC10.83□□□□□ -0.68
Cd9P40240 Tdrd3-202ENSMUST00000168275 2657 ntAPPRIS P3 TSL 1 (best) BASIC10.83□□□□□ -0.68
Cd9P40240 Vti1a-201ENSMUST00000095950 3405 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Cd9P40240 Rad1-202ENSMUST00000100775 4085 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Cd9P40240 Gm18294-201ENSMUST00000176980 1748 ntBASIC10.83□□□□□ -0.68
Cd9P40240 Dyrk1a-203ENSMUST00000122284 2356 ntTSL 5 BASIC10.83□□□□□ -0.68
Cd9P40240 Nf2-202ENSMUST00000056290 2394 ntAPPRIS ALT1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Cd9P40240 Zfp398-201ENSMUST00000079881 2906 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Cd9P40240 C2-206ENSMUST00000152417 2157 ntTSL 5 BASIC10.83□□□□□ -0.68
Cd9P40240 Lclat1-201ENSMUST00000067545 4467 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Cd9P40240 Kcnk10-201ENSMUST00000110113 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Cd9P40240 Esr2-205ENSMUST00000218621 3342 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Cd9P40240 Ppp1r17-201ENSMUST00000052827 1757 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Cd9P40240 Tmc5-202ENSMUST00000098088 3774 ntAPPRIS ALT2 TSL 5 BASIC10.82□□□□□ -0.68
Cd9P40240 C130021I20Rik-201ENSMUST00000147294 3693 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Cd9P40240 Asb7-202ENSMUST00000124899 4928 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Cd9P40240 Pomt1-201ENSMUST00000036473 2918 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Cd9P40240 S100pbp-203ENSMUST00000106059 4084 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Cd9P40240 Usp22-201ENSMUST00000041683 4434 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Cd9P40240 Zfp597-201ENSMUST00000090522 5668 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Cd9P40240 Nop14-201ENSMUST00000041364 2702 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Cd9P40240 Zbtb43-203ENSMUST00000113156 1828 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Cd9P40240 Ngfr-201ENSMUST00000000122 3446 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Cd9P40240 Gm45675-201ENSMUST00000211202 3429 ntBASIC10.82□□□□□ -0.68
Cd9P40240 Als2-204ENSMUST00000163058 5379 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Cd9P40240 Ly6e-202ENSMUST00000169343 2154 ntAPPRIS P1 TSL 5 BASIC10.82□□□□□ -0.68
Cd9P40240 Gm38344-201ENSMUST00000195306 1353 ntBASIC10.82□□□□□ -0.68
Cd9P40240 Ing3-202ENSMUST00000115389 2546 ntTSL 5 BASIC10.82□□□□□ -0.68
Cd9P40240 Morf4l2-213ENSMUST00000166478 1720 ntAPPRIS P1 TSL 2 BASIC10.82□□□□□ -0.68
Cd9P40240 Pex2-201ENSMUST00000059021 1749 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Cd9P40240 Gpatch2l-204ENSMUST00000221368 4355 ntAPPRIS P2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Cd9P40240 Gm20696-201ENSMUST00000155466 3560 ntAPPRIS P1 TSL 2 BASIC10.82□□□□□ -0.68
Cd9P40240 Wbp1l-204ENSMUST00000138302 3900 ntAPPRIS P3 TSL 1 (best) BASIC10.82□□□□□ -0.68
Cd9P40240 Ifna15-201ENSMUST00000102809 573 ntAPPRIS P1 BASIC10.82□□□□□ -0.68
Cd9P40240 2300003K06Rik-201ENSMUST00000105054 1265 ntAPPRIS P1 BASIC10.82□□□□□ -0.68
Cd9P40240 4930412O13Rik-202ENSMUST00000114919 558 ntAPPRIS ALT2 TSL 2 BASIC10.82□□□□□ -0.68
Cd9P40240 Gm16518-201ENSMUST00000117960 508 ntBASIC10.82□□□□□ -0.68
Cd9P40240 Gm12337-201ENSMUST00000119634 400 ntBASIC10.82□□□□□ -0.68
Cd9P40240 Gm12029-201ENSMUST00000120073 832 ntBASIC10.82□□□□□ -0.68
Cd9P40240 Gm12791-201ENSMUST00000120788 655 ntBASIC10.82□□□□□ -0.68
Cd9P40240 Gm14460-201ENSMUST00000121511 639 ntBASIC10.82□□□□□ -0.68
Cd9P40240 Gm10100-201ENSMUST00000179726 363 ntAPPRIS P1 BASIC10.82□□□□□ -0.68
Cd9P40240 Gm38313-201ENSMUST00000191953 1266 ntBASIC10.82□□□□□ -0.68
Cd9P40240 Ube2d3-216ENSMUST00000199613 738 ntAPPRIS P2 TSL 3 BASIC10.82□□□□□ -0.68
Cd9P40240 Gtf3c6-201ENSMUST00000019982 887 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Cd9P40240 Gm7880-201ENSMUST00000203748 871 ntBASIC10.82□□□□□ -0.68
Retrieved 100 of 76,532 protein–RNA pairs in 102.8 ms