Protein–RNA interactions for Protein: P29595

Nedd8, NEDD8, mousemouse

Predictions only

Length 81 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nedd8P29595 Gm43401-201ENSMUST00000198829 394 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
Nedd8P29595 Gm42851-201ENSMUST00000201325 1411 ntBASIC10.03□□□□□ -0.8
Nedd8P29595 4930404N11Rik-201ENSMUST00000020456 691 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Nedd8P29595 4933405L10Rik-202ENSMUST00000211852 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC10.03□□□□□ -0.8
Nedd8P29595 Wwp2-204ENSMUST00000212205 2758 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
Nedd8P29595 Gm45856-201ENSMUST00000212752 416 ntBASIC10.03□□□□□ -0.8
Nedd8P29595 Gm34923-201ENSMUST00000222673 5043 ntTSL 5 BASIC10.03□□□□□ -0.8
Nedd8P29595 Abhd14a-201ENSMUST00000048685 1256 ntAPPRIS P1 TSL 5 BASIC10.03□□□□□ -0.8
Nedd8P29595 Olfr463-201ENSMUST00000081417 936 ntAPPRIS P1 BASIC10.03□□□□□ -0.8
Nedd8P29595 Slc25a27-201ENSMUST00000024705 2687 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Nedd8P29595 Olfr287-204ENSMUST00000170618 1776 ntAPPRIS P1 TSL 2 BASIC10.03□□□□□ -0.8
Nedd8P29595 Nmt1-201ENSMUST00000021314 4861 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Nedd8P29595 Phf20-ps-201ENSMUST00000185066 2886 ntBASIC10.03□□□□□ -0.8
Nedd8P29595 Ccr6-203ENSMUST00000166348 1310 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Nedd8P29595 Dnmt1-202ENSMUST00000177754 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC10.03□□□□□ -0.8
Nedd8P29595 Cacna1c-214ENSMUST00000188106 6462 ntAPPRIS ALT2 TSL 1 (best) BASIC10.03□□□□□ -0.8
Nedd8P29595 Pax6-207ENSMUST00000111087 2559 ntAPPRIS ALT1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Nedd8P29595 Mllt10-201ENSMUST00000028076 4917 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Nedd8P29595 Scnn1a-206ENSMUST00000176655 3354 ntAPPRIS ALT2 TSL 5 BASIC10.03□□□□□ -0.8
Nedd8P29595 Pla2g5-203ENSMUST00000102512 1976 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Nedd8P29595 Gm21759-201ENSMUST00000178345 1828 ntBASIC10.03□□□□□ -0.8
Nedd8P29595 Gm36975-201ENSMUST00000194105 1828 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
Nedd8P29595 Erbb4-202ENSMUST00000121473 12037 ntAPPRIS P2 TSL 1 (best) BASIC10.03□□□□□ -0.8
Nedd8P29595 Acadsb-202ENSMUST00000117518 2466 ntAPPRIS ALT2 TSL 1 (best) BASIC10.02□□□□□ -0.8
Nedd8P29595 Pcdhgc5-201ENSMUST00000055935 4741 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.8
Nedd8P29595 Trim6-206ENSMUST00000214578 1506 ntTSL 5 BASIC10.02□□□□□ -0.8
Nedd8P29595 Crym-201ENSMUST00000033198 1383 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.8
Nedd8P29595 Ncapd3-202ENSMUST00000086198 4675 ntAPPRIS ALT2 TSL 1 (best) BASIC10.02□□□□□ -0.8
Nedd8P29595 Tpm3-204ENSMUST00000119570 2233 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
Nedd8P29595 Astn1-201ENSMUST00000046110 7195 ntAPPRIS ALT2 TSL 1 (best) BASIC10.02□□□□□ -0.81
Nedd8P29595 Snhg17-203ENSMUST00000141809 1553 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
Nedd8P29595 Gm44153-201ENSMUST00000204162 1580 ntBASIC10.02□□□□□ -0.81
Nedd8P29595 Nuggc-201ENSMUST00000079469 2567 ntAPPRIS P2 TSL 5 BASIC10.02□□□□□ -0.81
Nedd8P29595 Acot12-201ENSMUST00000022120 3058 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Nedd8P29595 Kalrn-203ENSMUST00000114947 2922 ntTSL 5 BASIC10.02□□□□□ -0.81
Nedd8P29595 Gm30228-201ENSMUST00000218501 1949 ntTSL 3 BASIC10.02□□□□□ -0.81
Nedd8P29595 Snrpn-201ENSMUST00000059305 1932 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Nedd8P29595 Kif1b-203ENSMUST00000060537 10233 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
Nedd8P29595 Gm11298-201ENSMUST00000120503 1799 ntBASIC10.02□□□□□ -0.81
Nedd8P29595 Gm37307-201ENSMUST00000193663 2621 ntBASIC10.02□□□□□ -0.81
Nedd8P29595 9130221F21Rik-201ENSMUST00000206867 2631 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
Nedd8P29595 Arl5c-202ENSMUST00000107563 823 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
Nedd8P29595 Eef1akmt4-201ENSMUST00000115522 1130 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Nedd8P29595 Uox-202ENSMUST00000121133 768 ntTSL 5 BASIC10.02□□□□□ -0.81
Nedd8P29595 Gm15853-201ENSMUST00000160268 556 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
Nedd8P29595 4930471C04Rik-201ENSMUST00000166038 865 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
Nedd8P29595 Gm7985-201ENSMUST00000183329 981 ntBASIC10.02□□□□□ -0.81
Nedd8P29595 Gm37424-201ENSMUST00000191727 561 ntBASIC10.02□□□□□ -0.81
Nedd8P29595 Gm43962-201ENSMUST00000203898 190 ntBASIC10.02□□□□□ -0.81
Nedd8P29595 C530044C16Rik-202ENSMUST00000205217 1239 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
Nedd8P29595 Gm9299-201ENSMUST00000206392 1140 ntBASIC10.02□□□□□ -0.81
Nedd8P29595 Gm45113-201ENSMUST00000207518 165 ntBASIC10.02□□□□□ -0.81
Nedd8P29595 Btg4-203ENSMUST00000213680 1282 ntAPPRIS P2 TSL 1 (best) BASIC10.02□□□□□ -0.81
Nedd8P29595 Gm3898-202ENSMUST00000216905 328 ntTSL 2 BASIC10.02□□□□□ -0.81
Nedd8P29595 Olfr368-201ENSMUST00000053990 985 ntAPPRIS P1 BASIC10.02□□□□□ -0.81
Nedd8P29595 Idua-201ENSMUST00000071650 3536 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Nedd8P29595 Epb41-204ENSMUST00000105970 5059 ntAPPRIS ALT2 TSL 5 BASIC10.02□□□□□ -0.81
Nedd8P29595 Tnfaip1-201ENSMUST00000017759 3720 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Nedd8P29595 Gm37451-201ENSMUST00000194718 2167 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
Nedd8P29595 Timd4-201ENSMUST00000068877 2173 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Nedd8P29595 Gm45768-201ENSMUST00000206763 3202 ntBASIC10.02□□□□□ -0.81
Nedd8P29595 Ilf3-204ENSMUST00000213603 3430 ntAPPRIS ALT2 TSL 5 BASIC10.02□□□□□ -0.81
Nedd8P29595 Ppcdc-201ENSMUST00000085709 2744 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Nedd8P29595 Rbbp6-202ENSMUST00000071590 5728 ntAPPRIS ALT2 TSL 5 BASIC10.02□□□□□ -0.81
Nedd8P29595 Adat1-202ENSMUST00000120457 1677 ntTSL 5 BASIC10.02□□□□□ -0.81
Nedd8P29595 Skiv2l-201ENSMUST00000046022 3951 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Nedd8P29595 H2-Eb2-201ENSMUST00000050325 2209 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Nedd8P29595 Vmn1r38-202ENSMUST00000227493 3486 ntAPPRIS P1 BASIC10.02□□□□□ -0.81
Nedd8P29595 Limk1-202ENSMUST00000111233 3109 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
Nedd8P29595 Kcnj5-202ENSMUST00000214223 3101 ntAPPRIS P1 TSL 5 BASIC10.02□□□□□ -0.81
Nedd8P29595 Sun1-203ENSMUST00000100517 1522 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
Nedd8P29595 Gm498-202ENSMUST00000152910 1507 ntAPPRIS P1 TSL 5 BASIC10.02□□□□□ -0.81
Nedd8P29595 Adam22-204ENSMUST00000088761 9077 ntAPPRIS ALT2 TSL 1 (best) BASIC10.02□□□□□ -0.81
Nedd8P29595 Snhg11-201ENSMUST00000109488 5864 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Nedd8P29595 Srgap2-204ENSMUST00000186543 3533 ntTSL 5 BASIC10.02□□□□□ -0.81
Nedd8P29595 AC113282.1-201ENSMUST00000225278 1707 ntAPPRIS P1 BASIC10.02□□□□□ -0.81
Nedd8P29595 Setd1b-201ENSMUST00000056053 7362 ntAPPRIS P2 TSL 5 BASIC10.02□□□□□ -0.81
Nedd8P29595 AC124561.1-202ENSMUST00000228652 1929 ntBASIC10.01□□□□□ -0.81
Nedd8P29595 Utp15-201ENSMUST00000040972 4120 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Nedd8P29595 Tardbp-210ENSMUST00000172073 6513 ntTSL 5 BASIC10.01□□□□□ -0.81
Nedd8P29595 Camk2b-207ENSMUST00000101586 1590 ntTSL 5 BASIC10.01□□□□□ -0.81
Nedd8P29595 Nmbr-201ENSMUST00000020015 1599 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Nedd8P29595 Padi3-201ENSMUST00000026377 3072 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Nedd8P29595 Cdkn1b-202ENSMUST00000067327 4552 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Nedd8P29595 Sorcs1-208ENSMUST00000211687 7080 ntAPPRIS P2 TSL 1 (best) BASIC10.01□□□□□ -0.81
Nedd8P29595 1500002C15Rik-201ENSMUST00000178987 2183 ntBASIC10.01□□□□□ -0.81
Nedd8P29595 Zfp958-202ENSMUST00000202692 2364 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Nedd8P29595 Gm5171-201ENSMUST00000214944 1415 ntBASIC10.01□□□□□ -0.81
Nedd8P29595 Trim34a-201ENSMUST00000060315 2590 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Nedd8P29595 Efna1-202ENSMUST00000118587 1632 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
Nedd8P29595 4930432L08Rik-201ENSMUST00000132154 1608 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
Nedd8P29595 Gpr19-201ENSMUST00000046255 1610 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Nedd8P29595 Katnal2-208ENSMUST00000137498 1824 ntTSL 5 BASIC10.01□□□□□ -0.81
Nedd8P29595 Mybph-201ENSMUST00000038445 1828 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Nedd8P29595 Dis3l2-202ENSMUST00000168237 3154 ntAPPRIS ALT2 TSL 1 (best) BASIC10.01□□□□□ -0.81
Nedd8P29595 Gm15482-201ENSMUST00000152691 4529 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
Nedd8P29595 Slc44a4-202ENSMUST00000169230 2246 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
Nedd8P29595 Gm26668-201ENSMUST00000181125 3635 ntTSL 5 BASIC10.01□□□□□ -0.81
Nedd8P29595 Vamp5-202ENSMUST00000101285 623 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Nedd8P29595 Cdc26-202ENSMUST00000107459 654 ntAPPRIS P1 TSL 2 BASIC10.01□□□□□ -0.81
Retrieved 100 of 76,532 protein–RNA pairs in 39.1 ms