Protein–RNA interactions for Protein: P25318

Col8a2, Collagen alpha-2(VIII) chain, mousemouse

Predictions only

Length 699 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col8a2P25318 Gm24328-201ENSMUST00000175104 67 ntBASIC9.15□□□□□ -0.94
Col8a2P25318 Scgb2b7-201ENSMUST00000178258 520 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.94
Col8a2P25318 Gm37590-201ENSMUST00000193294 603 ntTSL 5 BASIC9.15□□□□□ -0.94
Col8a2P25318 Gm37013-201ENSMUST00000194544 313 ntAPPRIS P1 TSL 5 BASIC9.15□□□□□ -0.94
Col8a2P25318 Gm25053-202ENSMUST00000199731 132 ntBASIC9.15□□□□□ -0.94
Col8a2P25318 4931419H13Rik-201ENSMUST00000199770 973 ntTSL 1 (best) BASIC9.15□□□□□ -0.94
Col8a2P25318 Mpv17-206ENSMUST00000201353 846 ntAPPRIS P3 TSL 3 BASIC9.15□□□□□ -0.94
Col8a2P25318 Gm15469-201ENSMUST00000201750 961 ntTSL 1 (best) BASIC9.15□□□□□ -0.94
Col8a2P25318 Psenen-203ENSMUST00000207747 669 ntAPPRIS P1 TSL 2 BASIC9.15□□□□□ -0.94
Col8a2P25318 Gm45258-201ENSMUST00000210042 853 ntBASIC9.15□□□□□ -0.94
Col8a2P25318 Ly86-201ENSMUST00000021860 1134 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.94
Col8a2P25318 Gm9111-201ENSMUST00000219394 709 ntBASIC9.15□□□□□ -0.94
Col8a2P25318 AC123694.1-201ENSMUST00000219525 644 ntTSL 5 BASIC9.15□□□□□ -0.94
Col8a2P25318 Banf2-201ENSMUST00000037722 571 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.94
Col8a2P25318 Cib4-201ENSMUST00000065486 769 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.94
Col8a2P25318 Gm7536-201ENSMUST00000077389 444 ntBASIC9.15□□□□□ -0.94
Col8a2P25318 Rps18-ps3-201ENSMUST00000080443 456 ntBASIC9.15□□□□□ -0.94
Col8a2P25318 Cd55-201ENSMUST00000027650 2533 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.94
Col8a2P25318 Pcnx-201ENSMUST00000021567 12139 ntAPPRIS P2 TSL 2 BASIC9.15□□□□□ -0.94
Col8a2P25318 Trpv6-201ENSMUST00000031902 2923 ntAPPRIS ALT2 TSL 1 (best) BASIC9.15□□□□□ -0.94
Col8a2P25318 Ncstn-201ENSMUST00000003550 2901 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.94
Col8a2P25318 Armc1-201ENSMUST00000029125 3673 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.94
Col8a2P25318 Nfkbiz-202ENSMUST00000096026 4067 ntAPPRIS ALT2 TSL 1 (best) BASIC9.15□□□□□ -0.94
Col8a2P25318 Slc6a16-201ENSMUST00000179310 2007 ntAPPRIS ALT2 TSL 5 BASIC9.15□□□□□ -0.94
Col8a2P25318 Gm45124-201ENSMUST00000206723 2755 ntBASIC9.15□□□□□ -0.95
Col8a2P25318 4930432K21Rik-202ENSMUST00000118856 2366 ntAPPRIS P4 TSL 1 (best) BASIC9.15□□□□□ -0.95
Col8a2P25318 Srsf5-205ENSMUST00000110356 1568 ntAPPRIS P3 TSL 5 BASIC9.15□□□□□ -0.95
Col8a2P25318 Kng2-203ENSMUST00000115349 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC9.15□□□□□ -0.95
Col8a2P25318 Ntrk2-207ENSMUST00000225488 4706 ntAPPRIS P1 BASIC9.15□□□□□ -0.95
Col8a2P25318 Supt3-201ENSMUST00000050630 1508 ntAPPRIS P2 TSL 1 (best) BASIC9.15□□□□□ -0.95
Col8a2P25318 Tiparp-201ENSMUST00000047906 4191 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.95
Col8a2P25318 Dcst2-201ENSMUST00000208216 2285 ntAPPRIS P1 TSL 5 BASIC9.15□□□□□ -0.95
Col8a2P25318 Cfap53-201ENSMUST00000114895 1888 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.95
Col8a2P25318 Gm36987-201ENSMUST00000194704 2979 ntBASIC9.15□□□□□ -0.95
Col8a2P25318 Clu-201ENSMUST00000022616 1810 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.95
Col8a2P25318 Abi2-207ENSMUST00000188618 4723 ntTSL 1 (best) BASIC9.14□□□□□ -0.95
Col8a2P25318 Isl1-201ENSMUST00000036060 2516 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
Col8a2P25318 Gm44056-201ENSMUST00000204623 1427 ntBASIC9.14□□□□□ -0.95
Col8a2P25318 Cycs-202ENSMUST00000161401 3123 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
Col8a2P25318 Zfp772-201ENSMUST00000074455 2777 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
Col8a2P25318 Bco1-202ENSMUST00000167370 1747 ntAPPRIS ALT2 TSL 5 BASIC9.14□□□□□ -0.95
Col8a2P25318 4930517G19Rik-201ENSMUST00000206152 1676 ntBASIC9.14□□□□□ -0.95
Col8a2P25318 Krba1-202ENSMUST00000077093 8380 ntTSL 1 (best) BASIC9.14□□□□□ -0.95
Col8a2P25318 Sp4-201ENSMUST00000026367 5694 ntAPPRIS ALT2 TSL 1 (best) BASIC9.14□□□□□ -0.95
Col8a2P25318 Tspoap1-201ENSMUST00000039627 7616 ntAPPRIS P2 TSL 5 BASIC9.14□□□□□ -0.95
Col8a2P25318 Fnip1-201ENSMUST00000046835 6255 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
Col8a2P25318 Ric3-201ENSMUST00000055993 5281 ntAPPRIS P3 TSL 1 (best) BASIC9.14□□□□□ -0.95
Col8a2P25318 Pip5k1a-206ENSMUST00000107236 3618 ntAPPRIS P3 TSL 1 (best) BASIC9.14□□□□□ -0.95
Col8a2P25318 Evl-204ENSMUST00000172409 1955 ntTSL 1 (best) BASIC9.14□□□□□ -0.95
Col8a2P25318 Ddr1-202ENSMUST00000097333 3593 ntAPPRIS ALT2 TSL 1 (best) BASIC9.14□□□□□ -0.95
Col8a2P25318 Tmub2-201ENSMUST00000036376 1939 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
Col8a2P25318 Sun3-202ENSMUST00000102909 1205 ntAPPRIS P3 TSL 1 (best) BASIC9.14□□□□□ -0.95
Col8a2P25318 Pfn1-202ENSMUST00000108549 608 ntTSL 2 BASIC9.14□□□□□ -0.95
Col8a2P25318 Gm11628-201ENSMUST00000117568 171 ntBASIC9.14□□□□□ -0.95
Col8a2P25318 Gm13549-201ENSMUST00000118339 796 ntBASIC9.14□□□□□ -0.95
Col8a2P25318 Gm12705-201ENSMUST00000129460 872 ntTSL 2 BASIC9.14□□□□□ -0.95
Col8a2P25318 Gm16271-201ENSMUST00000162837 220 ntTSL 5 BASIC9.14□□□□□ -0.95
Col8a2P25318 U2af1l4-218ENSMUST00000166960 747 ntTSL 3 BASIC9.14□□□□□ -0.95
Col8a2P25318 Ighv1-76-201ENSMUST00000169155 294 ntAPPRIS P1 BASIC9.14□□□□□ -0.95
Col8a2P25318 Ighv1-62-1-202ENSMUST00000171270 90 ntAPPRIS P1 BASIC9.14□□□□□ -0.95
Col8a2P25318 Gm18201-201ENSMUST00000174735 875 ntBASIC9.14□□□□□ -0.95
Col8a2P25318 Gm5210-201ENSMUST00000182150 1010 ntBASIC9.14□□□□□ -0.95
Col8a2P25318 1700063K16Rik-201ENSMUST00000190306 369 ntBASIC9.14□□□□□ -0.95
Col8a2P25318 Gm42660-201ENSMUST00000197733 947 ntBASIC9.14□□□□□ -0.95
Col8a2P25318 Ube2d3-216ENSMUST00000199613 738 ntAPPRIS P2 TSL 3 BASIC9.14□□□□□ -0.95
Col8a2P25318 BC028471-201ENSMUST00000200937 520 ntTSL 2 BASIC9.14□□□□□ -0.95
Col8a2P25318 Gm7880-201ENSMUST00000203748 871 ntBASIC9.14□□□□□ -0.95
Col8a2P25318 Rpl15-ps5-201ENSMUST00000205636 605 ntBASIC9.14□□□□□ -0.95
Col8a2P25318 Saa-ps-201ENSMUST00000211148 320 ntBASIC9.14□□□□□ -0.95
Col8a2P25318 4930431F10Rik-201ENSMUST00000213122 1157 ntTSL 1 (best) BASIC9.14□□□□□ -0.95
Col8a2P25318 Gm2594-201ENSMUST00000214774 742 ntBASIC9.14□□□□□ -0.95
Col8a2P25318 Gm6390-201ENSMUST00000215034 589 ntBASIC9.14□□□□□ -0.95
Col8a2P25318 Taar7f-201ENSMUST00000071691 1077 ntAPPRIS P1 BASIC9.14□□□□□ -0.95
Col8a2P25318 Prr19-201ENSMUST00000080288 1240 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
Col8a2P25318 Myl9-201ENSMUST00000088552 1128 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
Col8a2P25318 Krtap12-1-201ENSMUST00000092370 656 ntAPPRIS P1 BASIC9.14□□□□□ -0.95
Col8a2P25318 Taar7d-201ENSMUST00000092657 1077 ntAPPRIS P1 BASIC9.14□□□□□ -0.95
Col8a2P25318 Aven-202ENSMUST00000099588 791 ntAPPRIS ALT2 TSL 3 BASIC9.14□□□□□ -0.95
Col8a2P25318 Gm10419-202ENSMUST00000196693 2530 ntTSL 1 (best) BASIC9.14□□□□□ -0.95
Col8a2P25318 Rgr-203ENSMUST00000225070 4704 ntBASIC9.14□□□□□ -0.95
Col8a2P25318 Prg4-201ENSMUST00000006171 1869 ntTSL 1 (best) BASIC9.14□□□□□ -0.95
Col8a2P25318 Myo16-203ENSMUST00000207477 7169 ntAPPRIS P2 TSL 1 (best) BASIC9.14□□□□□ -0.95
Col8a2P25318 Kif26b-201ENSMUST00000160789 6216 ntAPPRIS ALT2 TSL 1 (best) BASIC9.14□□□□□ -0.95
Col8a2P25318 Gm43963-201ENSMUST00000203466 2488 ntBASIC9.14□□□□□ -0.95
Col8a2P25318 Plscr3-203ENSMUST00000108633 2785 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
Col8a2P25318 Pde2a-202ENSMUST00000166652 3977 ntAPPRIS P3 TSL 1 (best) BASIC9.14□□□□□ -0.95
Col8a2P25318 Fxr1-206ENSMUST00000198051 2127 ntTSL 5 BASIC9.14□□□□□ -0.95
Col8a2P25318 Mx2-202ENSMUST00000188251 2421 ntTSL 1 (best) BASIC9.14□□□□□ -0.95
Col8a2P25318 Rims2-202ENSMUST00000082054 4800 ntAPPRIS P3 TSL 2 BASIC9.14□□□□□ -0.95
Col8a2P25318 L1cam-202ENSMUST00000102871 5113 ntAPPRIS P2 TSL 1 (best) BASIC9.14□□□□□ -0.95
Col8a2P25318 Aff3-202ENSMUST00000039827 6010 ntAPPRIS ALT2 TSL 5 BASIC9.14□□□□□ -0.95
Col8a2P25318 Zfp354a-204ENSMUST00000109122 4165 ntAPPRIS ALT2 TSL 1 (best) BASIC9.14□□□□□ -0.95
Col8a2P25318 Mak-203ENSMUST00000165087 3562 ntAPPRIS ALT2 TSL 1 (best) BASIC9.14□□□□□ -0.95
Col8a2P25318 Araf-201ENSMUST00000001155 2358 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
Col8a2P25318 E330023G01Rik-201ENSMUST00000186387 1483 ntTSL 1 (best) BASIC9.14□□□□□ -0.95
Col8a2P25318 Socs6-202ENSMUST00000123826 2921 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
Col8a2P25318 Gm32856-201ENSMUST00000212145 3767 ntTSL 1 (best) BASIC9.14□□□□□ -0.95
Col8a2P25318 Slc10a1-202ENSMUST00000218162 1749 ntAPPRIS P2 TSL 1 (best) BASIC9.14□□□□□ -0.95
Col8a2P25318 Pnkd-202ENSMUST00000087225 2859 ntTSL 1 (best) BASIC9.14□□□□□ -0.95
Col8a2P25318 Lrrn4-201ENSMUST00000049787 3715 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
Retrieved 100 of 76,532 protein–RNA pairs in 67.8 ms