Protein–RNA interactions for Protein: P20334

Tnfrsf9, Tumor necrosis factor receptor superfamily member 9, mousemouse

Predictions only

Length 256 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfrsf9P20334 Rad1-202ENSMUST00000100775 4085 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
Tnfrsf9P20334 Tmem161a-201ENSMUST00000002413 3018 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Tnfrsf9P20334 Lepr-203ENSMUST00000106921 5542 ntAPPRIS ALT2 TSL 1 (best) BASIC9.37□□□□□ -0.91
Tnfrsf9P20334 Hoxa9-201ENSMUST00000048680 3226 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Tnfrsf9P20334 Klrc1-201ENSMUST00000032270 1984 ntAPPRIS ALT2 TSL 1 (best) BASIC9.37□□□□□ -0.91
Tnfrsf9P20334 Cep350-204ENSMUST00000138762 13307 ntAPPRIS P1 TSL 5 BASIC9.37□□□□□ -0.91
Tnfrsf9P20334 Nemp1-203ENSMUST00000118728 2362 ntAPPRIS ALT2 TSL 1 (best) BASIC9.37□□□□□ -0.91
Tnfrsf9P20334 Dnaic2-202ENSMUST00000092469 2799 ntAPPRIS P1 TSL 5 BASIC9.37□□□□□ -0.91
Tnfrsf9P20334 Cnot7-211ENSMUST00000149992 2982 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Tnfrsf9P20334 Tfip11-201ENSMUST00000031288 3560 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Tnfrsf9P20334 Gm4735-201ENSMUST00000138679 1302 ntBASIC9.37□□□□□ -0.91
Tnfrsf9P20334 Gm5855-201ENSMUST00000200240 1305 ntBASIC9.37□□□□□ -0.91
Tnfrsf9P20334 C1qtnf9-201ENSMUST00000025940 1903 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Tnfrsf9P20334 Slc4a9-201ENSMUST00000074298 2714 ntAPPRIS P3 TSL 5 BASIC9.37□□□□□ -0.91
Tnfrsf9P20334 Trappc8-202ENSMUST00000097658 2703 ntAPPRIS P3 TSL 1 (best) BASIC9.37□□□□□ -0.91
Tnfrsf9P20334 Prkag2-201ENSMUST00000030784 3331 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
Tnfrsf9P20334 Shoc2-201ENSMUST00000025932 4106 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Tnfrsf9P20334 Rhoj-203ENSMUST00000118966 4892 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
Tnfrsf9P20334 Gpr173-201ENSMUST00000070316 4855 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Tnfrsf9P20334 Gpr155-203ENSMUST00000112043 3284 ntAPPRIS P3 TSL 5 BASIC9.37□□□□□ -0.91
Tnfrsf9P20334 Gm42971-201ENSMUST00000199228 2079 ntBASIC9.37□□□□□ -0.91
Tnfrsf9P20334 1300017J02Rik-202ENSMUST00000123530 1874 ntTSL 5 BASIC9.37□□□□□ -0.91
Tnfrsf9P20334 2700068H02Rik-201ENSMUST00000137882 1872 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
Tnfrsf9P20334 Rita1-207ENSMUST00000177800 1668 ntAPPRIS P1 TSL 5 BASIC9.37□□□□□ -0.91
Tnfrsf9P20334 Gm14025-201ENSMUST00000145798 4242 ntAPPRIS P1 TSL 5 BASIC9.37□□□□□ -0.91
Tnfrsf9P20334 Cldn34d-201ENSMUST00000114054 1003 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Tnfrsf9P20334 Vbp1-202ENSMUST00000114070 632 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
Tnfrsf9P20334 Gm11893-201ENSMUST00000117829 491 ntBASIC9.37□□□□□ -0.91
Tnfrsf9P20334 Gm15595-201ENSMUST00000120840 961 ntBASIC9.37□□□□□ -0.91
Tnfrsf9P20334 Pyy-202ENSMUST00000127381 529 ntAPPRIS ALT2 TSL 2 BASIC9.37□□□□□ -0.91
Tnfrsf9P20334 Gm15619-201ENSMUST00000128415 1294 ntTSL 3 BASIC9.37□□□□□ -0.91
Tnfrsf9P20334 Ly6g6e-201ENSMUST00000013910 1142 ntAPPRIS P2 TSL 1 (best) BASIC9.37□□□□□ -0.91
Tnfrsf9P20334 Gm13523-201ENSMUST00000151820 488 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
Tnfrsf9P20334 Gm16312-201ENSMUST00000156285 362 ntTSL 3 BASIC9.37□□□□□ -0.91
Tnfrsf9P20334 Bud31-206ENSMUST00000162308 705 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
Tnfrsf9P20334 1700121N20Rik-201ENSMUST00000167922 1027 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
Tnfrsf9P20334 Gm5726-201ENSMUST00000173886 924 ntAPPRIS P1 BASIC9.37□□□□□ -0.91
Tnfrsf9P20334 Gm8677-201ENSMUST00000174637 924 ntAPPRIS P1 BASIC9.37□□□□□ -0.91
Tnfrsf9P20334 Mir8115-201ENSMUST00000184992 119 ntBASIC9.37□□□□□ -0.91
Tnfrsf9P20334 1700010H22Rik-202ENSMUST00000187592 1003 ntTSL 5 BASIC9.37□□□□□ -0.91
Tnfrsf9P20334 Gm28721-201ENSMUST00000187649 918 ntTSL 3 BASIC9.37□□□□□ -0.91
Tnfrsf9P20334 Gm17877-201ENSMUST00000192578 814 ntBASIC9.37□□□□□ -0.91
Tnfrsf9P20334 C030032O16Rik-201ENSMUST00000196427 716 ntBASIC9.37□□□□□ -0.91
Tnfrsf9P20334 Gm42696-201ENSMUST00000199859 1142 ntBASIC9.37□□□□□ -0.91
Tnfrsf9P20334 Gm45021-201ENSMUST00000204521 369 ntAPPRIS P1 TSL 5 BASIC9.37□□□□□ -0.91
Tnfrsf9P20334 Olfr1449-202ENSMUST00000208624 1296 ntAPPRIS P1 TSL 3 BASIC9.37□□□□□ -0.91
Tnfrsf9P20334 Gm2875-201ENSMUST00000211333 360 ntBASIC9.37□□□□□ -0.91
Tnfrsf9P20334 AC153544.1-201ENSMUST00000217988 400 ntBASIC9.37□□□□□ -0.91
Tnfrsf9P20334 Gm9139-201ENSMUST00000218817 700 ntBASIC9.37□□□□□ -0.91
Tnfrsf9P20334 AC126043.1-201ENSMUST00000221304 1141 ntBASIC9.37□□□□□ -0.91
Tnfrsf9P20334 AC116589.9-201ENSMUST00000221462 908 ntBASIC9.37□□□□□ -0.91
Tnfrsf9P20334 AC166344.1-201ENSMUST00000223745 674 ntBASIC9.37□□□□□ -0.91
Tnfrsf9P20334 AC151275.1-201ENSMUST00000224870 585 ntBASIC9.37□□□□□ -0.91
Tnfrsf9P20334 Prr13-201ENSMUST00000023810 1224 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Tnfrsf9P20334 Scg5-201ENSMUST00000024005 1208 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Tnfrsf9P20334 1700012P22Rik-201ENSMUST00000030323 974 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Tnfrsf9P20334 Commd4-201ENSMUST00000065358 858 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Tnfrsf9P20334 Rpl15-201ENSMUST00000079419 883 ntAPPRIS P1 TSL 2 BASIC9.37□□□□□ -0.91
Tnfrsf9P20334 Tcirg1-204ENSMUST00000126070 3041 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Tnfrsf9P20334 Prkcd-201ENSMUST00000022521 2612 ntAPPRIS ALT2 TSL 1 (best) BASIC9.37□□□□□ -0.91
Tnfrsf9P20334 Agrn-203ENSMUST00000105575 7262 ntTSL 5 BASIC9.37□□□□□ -0.91
Tnfrsf9P20334 Tbc1d17-201ENSMUST00000047085 8750 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Tnfrsf9P20334 Mroh7-201ENSMUST00000106770 4346 ntAPPRIS P1 TSL 5 BASIC9.37□□□□□ -0.91
Tnfrsf9P20334 Slc45a2-201ENSMUST00000117100 2983 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Tnfrsf9P20334 4931406C07Rik-203ENSMUST00000180339 2756 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Tnfrsf9P20334 Hdac6-202ENSMUST00000115642 4069 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Tnfrsf9P20334 Gm38005-201ENSMUST00000194845 2745 ntBASIC9.37□□□□□ -0.91
Tnfrsf9P20334 Tmem47-201ENSMUST00000026760 4007 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Tnfrsf9P20334 Prdm1-204ENSMUST00000218369 2517 ntAPPRIS ALT2 TSL 5 BASIC9.37□□□□□ -0.91
Tnfrsf9P20334 Ppp3cb-202ENSMUST00000159027 3831 ntAPPRIS P3 TSL 1 (best) BASIC9.37□□□□□ -0.91
Tnfrsf9P20334 Rtbdn-204ENSMUST00000152378 2322 ntAPPRIS ALT2 TSL 1 (best) BASIC9.37□□□□□ -0.91
Tnfrsf9P20334 1110051M20Rik-201ENSMUST00000064652 2896 ntAPPRIS ALT1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Tnfrsf9P20334 Tagln2-202ENSMUST00000111230 1586 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Tnfrsf9P20334 Olfr1032-203ENSMUST00000111589 1393 ntAPPRIS P1 TSL 5 BASIC9.37□□□□□ -0.91
Tnfrsf9P20334 Tspan8-203ENSMUST00000179196 1381 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Tnfrsf9P20334 Slc25a21-205ENSMUST00000217690 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC9.37□□□□□ -0.91
Tnfrsf9P20334 Dlgap1-210ENSMUST00000146730 3936 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
Tnfrsf9P20334 Rnf144a-202ENSMUST00000062149 4812 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Tnfrsf9P20334 Kbtbd12-202ENSMUST00000120933 4644 ntAPPRIS P1 TSL 5 BASIC9.36□□□□□ -0.91
Tnfrsf9P20334 Ncapd2-201ENSMUST00000043848 4629 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Tnfrsf9P20334 Ndst1-201ENSMUST00000169273 6070 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Tnfrsf9P20334 Pou2f3-201ENSMUST00000034513 2610 ntAPPRIS ALT2 TSL 1 (best) BASIC9.36□□□□□ -0.91
Tnfrsf9P20334 Qrich1-201ENSMUST00000006851 3331 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Tnfrsf9P20334 Atf7ip2-201ENSMUST00000044005 2778 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Tnfrsf9P20334 Myh13-203ENSMUST00000180845 5991 ntAPPRIS P1 TSL 5 BASIC9.36□□□□□ -0.91
Tnfrsf9P20334 Aurkc-203ENSMUST00000207711 1320 ntAPPRIS ALT2 TSL 1 (best) BASIC9.36□□□□□ -0.91
Tnfrsf9P20334 Snap29-201ENSMUST00000023449 3429 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Tnfrsf9P20334 Ascc2-202ENSMUST00000109930 4844 ntAPPRIS ALT2 TSL 1 (best) BASIC9.36□□□□□ -0.91
Tnfrsf9P20334 Pdcd11-201ENSMUST00000072141 6041 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Tnfrsf9P20334 Clcn3-202ENSMUST00000056508 5684 ntAPPRIS P4 TSL 1 (best) BASIC9.36□□□□□ -0.91
Tnfrsf9P20334 C2cd5-203ENSMUST00000171349 4292 ntAPPRIS P1 TSL 5 BASIC9.36□□□□□ -0.91
Tnfrsf9P20334 Paqr5-201ENSMUST00000034817 3566 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Tnfrsf9P20334 Epb41l3-202ENSMUST00000112680 4073 ntAPPRIS ALT2 TSL 5 BASIC9.36□□□□□ -0.91
Tnfrsf9P20334 Med12l-203ENSMUST00000040846 3747 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
Tnfrsf9P20334 Tmem176b-202ENSMUST00000164733 1648 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Tnfrsf9P20334 Gm43052-201ENSMUST00000201451 1628 ntBASIC9.36□□□□□ -0.91
Tnfrsf9P20334 Cnga4-201ENSMUST00000033187 2484 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Tnfrsf9P20334 Rbm3-205ENSMUST00000115619 969 ntAPPRIS ALT1 TSL 3 BASIC9.36□□□□□ -0.91
Tnfrsf9P20334 Gm11663-201ENSMUST00000117888 290 ntBASIC9.36□□□□□ -0.91
Tnfrsf9P20334 Slc7a12-202ENSMUST00000120484 1010 ntTSL 5 BASIC9.36□□□□□ -0.91
Retrieved 100 of 76,532 protein–RNA pairs in 55.3 ms