Protein–RNA interactions for Protein: P11087

Col1a1, Collagen alpha-1(I) chain, mousemouse

Predictions only

Length 1,453 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col1a1P11087 Gm12207-201ENSMUST00000143016 494 ntTSL 2 BASIC12.74□□□□□ -0.37
Col1a1P11087 Gm44236-201ENSMUST00000204492 513 ntBASIC12.74□□□□□ -0.37
Col1a1P11087 AC174647.1-201ENSMUST00000227419 1271 ntBASIC12.74□□□□□ -0.37
Col1a1P11087 Atp6v1e2-201ENSMUST00000065758 1005 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Col1a1P11087 Tmsb15b2-201ENSMUST00000069803 450 ntTSL 2 BASIC12.74□□□□□ -0.37
Col1a1P11087 Gm45776-201ENSMUST00000212366 1522 ntBASIC12.74□□□□□ -0.37
Col1a1P11087 Ret-201ENSMUST00000032201 5456 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
Col1a1P11087 Btg2-201ENSMUST00000020692 2743 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Col1a1P11087 Pcdhgc3-201ENSMUST00000076807 4687 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Col1a1P11087 Gm36211-201ENSMUST00000198171 1497 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Col1a1P11087 Camta2-203ENSMUST00000108544 4632 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Col1a1P11087 Ccdc154-203ENSMUST00000182621 2402 ntAPPRIS P2 TSL 5 BASIC12.74□□□□□ -0.37
Col1a1P11087 Gm30228-201ENSMUST00000218501 1949 ntTSL 3 BASIC12.74□□□□□ -0.37
Col1a1P11087 Adat3-201ENSMUST00000178231 4516 ntAPPRIS P1 TSL 2 BASIC12.74□□□□□ -0.37
Col1a1P11087 Tmigd1-202ENSMUST00000102495 1427 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Col1a1P11087 Gm6713-201ENSMUST00000216137 1446 ntBASIC12.74□□□□□ -0.37
Col1a1P11087 Elmod3-201ENSMUST00000070990 2122 ntAPPRIS P2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Col1a1P11087 Metap2-208ENSMUST00000181091 1876 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Col1a1P11087 Vps4b-201ENSMUST00000094646 4633 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Col1a1P11087 Dph5-202ENSMUST00000106505 1836 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Col1a1P11087 Scd2-201ENSMUST00000026221 5453 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Col1a1P11087 Hsh2d-201ENSMUST00000072097 1824 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Col1a1P11087 Pin1-201ENSMUST00000034689 3843 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Col1a1P11087 Gatad2a-201ENSMUST00000065169 3812 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
Col1a1P11087 Traf3ip2-201ENSMUST00000019987 2867 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Col1a1P11087 Mrps23-201ENSMUST00000024486 1332 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Col1a1P11087 Trim11-202ENSMUST00000108809 3522 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Col1a1P11087 Tyk2-206ENSMUST00000216874 4828 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Col1a1P11087 Clec12b-201ENSMUST00000032261 1521 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Col1a1P11087 Tfe3-203ENSMUST00000101695 2989 ntTSL 5 BASIC12.73□□□□□ -0.37
Col1a1P11087 Gm16178-201ENSMUST00000129408 677 ntTSL 2 BASIC12.73□□□□□ -0.37
Col1a1P11087 Gng2-203ENSMUST00000159073 960 ntAPPRIS P1 TSL 2 BASIC12.73□□□□□ -0.37
Col1a1P11087 Gm16268-201ENSMUST00000159445 1157 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Col1a1P11087 Itgb1bp1-202ENSMUST00000172834 801 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Col1a1P11087 Gm22876-201ENSMUST00000175450 298 ntBASIC12.73□□□□□ -0.37
Col1a1P11087 Gm18122-201ENSMUST00000211390 904 ntBASIC12.73□□□□□ -0.37
Col1a1P11087 CAAA01125382.3-201ENSMUST00000215277 643 ntBASIC12.73□□□□□ -0.37
Col1a1P11087 Gm6304-201ENSMUST00000096579 447 ntBASIC12.73□□□□□ -0.37
Col1a1P11087 Zfp93-201ENSMUST00000032696 2324 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Col1a1P11087 Uimc1-201ENSMUST00000026997 2931 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Col1a1P11087 Nfe2l1-212ENSMUST00000169828 3530 ntTSL 2 BASIC12.73□□□□□ -0.37
Col1a1P11087 Phf24-201ENSMUST00000069184 6392 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Col1a1P11087 Nprl3-202ENSMUST00000109389 1642 ntAPPRIS ALT1 TSL 5 BASIC12.73□□□□□ -0.37
Col1a1P11087 Krt34-201ENSMUST00000056362 1609 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Col1a1P11087 CT010462.1-202ENSMUST00000222225 2225 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Col1a1P11087 Idua-203ENSMUST00000119212 3022 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Col1a1P11087 Gm45743-201ENSMUST00000212701 2795 ntBASIC12.73□□□□□ -0.37
Col1a1P11087 Tulp2-203ENSMUST00000107758 1597 ntTSL 5 BASIC12.73□□□□□ -0.37
Col1a1P11087 Kyat1-203ENSMUST00000113660 1388 ntTSL 5 BASIC12.73□□□□□ -0.37
Col1a1P11087 Eif5-212ENSMUST00000222375 3547 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Col1a1P11087 Eif5-213ENSMUST00000222388 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Col1a1P11087 Hif3a-202ENSMUST00000108492 6402 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Col1a1P11087 Rbm10-205ENSMUST00000115375 3698 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Col1a1P11087 H2-T3-201ENSMUST00000025312 2114 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Col1a1P11087 Pdcd10-205ENSMUST00000161137 1927 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Col1a1P11087 Spock3-203ENSMUST00000118003 2860 ntAPPRIS P3 TSL 5 BASIC12.73□□□□□ -0.37
Col1a1P11087 Rfx1-201ENSMUST00000005600 4172 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Col1a1P11087 Rapgef6-202ENSMUST00000101206 5864 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
Col1a1P11087 4930447F24Rik-201ENSMUST00000194140 1341 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Col1a1P11087 Vcp-201ENSMUST00000030164 3316 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Col1a1P11087 Gm24470-201ENSMUST00000104486 132 ntBASIC12.72□□□□□ -0.37
Col1a1P11087 Slc25a21-202ENSMUST00000110680 918 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
Col1a1P11087 Lypla1-202ENSMUST00000115529 930 ntTSL 2 BASIC12.72□□□□□ -0.37
Col1a1P11087 Gm12684-201ENSMUST00000118675 999 ntBASIC12.72□□□□□ -0.37
Col1a1P11087 Rrm2b-207ENSMUST00000146821 420 ntTSL 5 BASIC12.72□□□□□ -0.37
Col1a1P11087 Sectm1b-206ENSMUST00000168459 1075 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Col1a1P11087 Gm22994-201ENSMUST00000175422 82 ntBASIC12.72□□□□□ -0.37
Col1a1P11087 Scgb2b27-203ENSMUST00000185399 702 ntAPPRIS ALT2 TSL 2 BASIC12.72□□□□□ -0.37
Col1a1P11087 Gm8828-201ENSMUST00000196786 1290 ntBASIC12.72□□□□□ -0.37
Col1a1P11087 Gm3791-201ENSMUST00000220790 768 ntBASIC12.72□□□□□ -0.37
Col1a1P11087 Nqo2-203ENSMUST00000220844 957 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Col1a1P11087 AC130217.1-201ENSMUST00000224146 909 ntBASIC12.72□□□□□ -0.37
Col1a1P11087 Anxa11-202ENSMUST00000112364 1625 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Col1a1P11087 Gm8122-201ENSMUST00000165988 1404 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
Col1a1P11087 Gm35963-201ENSMUST00000211762 1425 ntTSL 5 BASIC12.72□□□□□ -0.37
Col1a1P11087 Taok2-202ENSMUST00000117394 4985 ntAPPRIS P4 TSL 1 (best) BASIC12.72□□□□□ -0.37
Col1a1P11087 Klf10-203ENSMUST00000227920 2144 ntBASIC12.72□□□□□ -0.37
Col1a1P11087 Igsf11-202ENSMUST00000114706 1578 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Col1a1P11087 Ces3b-201ENSMUST00000074403 1907 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Col1a1P11087 Plekha6-203ENSMUST00000186917 4820 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Col1a1P11087 Galntl6-208ENSMUST00000204128 5680 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
Col1a1P11087 Celf1-202ENSMUST00000068726 7851 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Col1a1P11087 Stxbp4-203ENSMUST00000107875 1660 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Col1a1P11087 Sdad1-201ENSMUST00000031364 5020 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Col1a1P11087 Gm37264-201ENSMUST00000194916 2192 ntBASIC12.72□□□□□ -0.37
Col1a1P11087 Gm15599-201ENSMUST00000122283 1345 ntBASIC12.72□□□□□ -0.37
Col1a1P11087 A530013C23Rik-202ENSMUST00000141923 3489 ntTSL 2 BASIC12.72□□□□□ -0.37
Col1a1P11087 4930431P19Rik-202ENSMUST00000207761 2959 ntBASIC12.72□□□□□ -0.37
Col1a1P11087 Cyb561d1-203ENSMUST00000106655 4275 ntAPPRIS P4 TSL 1 (best) BASIC12.72□□□□□ -0.37
Col1a1P11087 Rragd-202ENSMUST00000084747 4295 ntTSL 5 BASIC12.72□□□□□ -0.37
Col1a1P11087 Gm13169-201ENSMUST00000122090 1459 ntBASIC12.72□□□□□ -0.37
Col1a1P11087 Fam198a-203ENSMUST00000214536 2789 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Col1a1P11087 Map6-201ENSMUST00000068973 3430 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
Col1a1P11087 C530044C16Rik-201ENSMUST00000204275 1624 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Col1a1P11087 Pou4f2-201ENSMUST00000034115 3204 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Col1a1P11087 Gng7-203ENSMUST00000117805 3382 ntAPPRIS ALT1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Col1a1P11087 Trak1-213ENSMUST00000211439 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Col1a1P11087 Wfdc2-203ENSMUST00000109345 558 ntAPPRIS ALT2 TSL 3 BASIC12.72□□□□□ -0.37
Col1a1P11087 Gm16283-201ENSMUST00000149935 522 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Col1a1P11087 Gm26208-201ENSMUST00000158677 124 ntBASIC12.72□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 50.3 ms