Protein–RNA interactions for Protein: P09026

Hoxb3, Homeobox protein Hox-B3, mousemouse

Predictions only

Length 433 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxb3P09026 Bmp1-201ENSMUST00000022693 3684 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Hoxb3P09026 Fdxacb1-201ENSMUST00000042391 2658 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Hoxb3P09026 Rab27b-201ENSMUST00000069749 2671 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Hoxb3P09026 Kcnab2-201ENSMUST00000030768 3533 ntAPPRIS ALT1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Hoxb3P09026 Pamr1-201ENSMUST00000028612 2864 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Hoxb3P09026 Kcnma1-213ENSMUST00000188991 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Hoxb3P09026 Rftn1-202ENSMUST00000113195 2385 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Hoxb3P09026 9130019O22Rik-202ENSMUST00000164345 2735 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Hoxb3P09026 AC154354.1-203ENSMUST00000225565 1364 ntBASIC11.29□□□□□ -0.6
Hoxb3P09026 Tmem63b-201ENSMUST00000113523 3284 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Hoxb3P09026 Sox7-201ENSMUST00000079652 3299 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Hoxb3P09026 Arntl2-202ENSMUST00000111636 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Hoxb3P09026 Dmp1-201ENSMUST00000066708 2764 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Hoxb3P09026 Camk2b-207ENSMUST00000101586 1590 ntTSL 5 BASIC11.29□□□□□ -0.6
Hoxb3P09026 Gm35339-201ENSMUST00000208833 5090 ntAPPRIS P1 TSL 5 BASIC11.29□□□□□ -0.6
Hoxb3P09026 Gm39321-203ENSMUST00000217090 1575 ntTSL 5 BASIC11.29□□□□□ -0.6
Hoxb3P09026 Gm43242-201ENSMUST00000199507 1776 ntBASIC11.29□□□□□ -0.6
Hoxb3P09026 Dst-213ENSMUST00000183302 8788 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Hoxb3P09026 Wisp1-201ENSMUST00000005255 5097 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Hoxb3P09026 Mdga2-201ENSMUST00000037181 9833 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Hoxb3P09026 Ighv5-9-201ENSMUST00000103448 418 ntAPPRIS P1 BASIC11.29□□□□□ -0.6
Hoxb3P09026 Gm4294-201ENSMUST00000105169 614 ntBASIC11.29□□□□□ -0.6
Hoxb3P09026 Gm14746-201ENSMUST00000120309 741 ntBASIC11.29□□□□□ -0.6
Hoxb3P09026 Rpl10-ps6-201ENSMUST00000121321 642 ntBASIC11.29□□□□□ -0.6
Hoxb3P09026 Gemin7-205ENSMUST00000122127 652 ntAPPRIS P1 TSL 3 BASIC11.29□□□□□ -0.6
Hoxb3P09026 Gm12885-201ENSMUST00000122246 328 ntBASIC11.29□□□□□ -0.6
Hoxb3P09026 Gm13981-201ENSMUST00000122360 447 ntBASIC11.29□□□□□ -0.6
Hoxb3P09026 Bach2it1-201ENSMUST00000133451 481 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Hoxb3P09026 E130307A14Rik-204ENSMUST00000139356 701 ntTSL 3 BASIC11.29□□□□□ -0.6
Hoxb3P09026 Speer4cos-201ENSMUST00000162113 1083 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Hoxb3P09026 Gm28962-201ENSMUST00000187993 621 ntTSL 5 BASIC11.29□□□□□ -0.6
Hoxb3P09026 Gm28692-202ENSMUST00000189645 621 ntTSL 5 BASIC11.29□□□□□ -0.6
Hoxb3P09026 Gm29040-201ENSMUST00000189899 1188 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Hoxb3P09026 Gm37678-201ENSMUST00000192908 1146 ntBASIC11.29□□□□□ -0.6
Hoxb3P09026 Gm37740-202ENSMUST00000194757 621 ntTSL 5 BASIC11.29□□□□□ -0.6
Hoxb3P09026 Gm43391-201ENSMUST00000196145 883 ntTSL 5 BASIC11.29□□□□□ -0.6
Hoxb3P09026 Gm42783-201ENSMUST00000197075 795 ntBASIC11.29□□□□□ -0.6
Hoxb3P09026 Gm21847-202ENSMUST00000198681 883 ntTSL 5 BASIC11.29□□□□□ -0.6
Hoxb3P09026 Nutf2-202ENSMUST00000212042 645 ntAPPRIS P1 TSL 3 BASIC11.29□□□□□ -0.6
Hoxb3P09026 Rpl10-ps5-201ENSMUST00000212707 642 ntBASIC11.29□□□□□ -0.6
Hoxb3P09026 Gm35615-201ENSMUST00000221255 719 ntTSL 3 BASIC11.29□□□□□ -0.6
Hoxb3P09026 Gm3379-201ENSMUST00000222259 642 ntBASIC11.29□□□□□ -0.6
Hoxb3P09026 CT030170.2-201ENSMUST00000223267 126 ntBASIC11.29□□□□□ -0.6
Hoxb3P09026 Gm5468-202ENSMUST00000227851 682 ntBASIC11.29□□□□□ -0.6
Hoxb3P09026 Fsip1-201ENSMUST00000028820 1025 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Hoxb3P09026 Zfp982-201ENSMUST00000063704 1244 ntAPPRIS P1 TSL 3 BASIC11.29□□□□□ -0.6
Hoxb3P09026 Olfr898-201ENSMUST00000076504 951 ntAPPRIS P2 BASIC11.29□□□□□ -0.6
Hoxb3P09026 Lhfpl5-201ENSMUST00000080780 1248 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Hoxb3P09026 Zc3hc1-201ENSMUST00000080812 1824 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Hoxb3P09026 Lysmd1-201ENSMUST00000066386 2394 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Hoxb3P09026 Rab8a-201ENSMUST00000003121 4550 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Hoxb3P09026 Trim46-201ENSMUST00000041022 3122 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Hoxb3P09026 Hars2-201ENSMUST00000019287 2002 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Hoxb3P09026 Gm45012-201ENSMUST00000208323 1666 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Hoxb3P09026 Olfr223-202ENSMUST00000215626 1695 ntAPPRIS P1 TSL 5 BASIC11.29□□□□□ -0.6
Hoxb3P09026 2810006K23Rik-201ENSMUST00000077376 1677 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Hoxb3P09026 Gm43747-201ENSMUST00000201412 1330 ntBASIC11.29□□□□□ -0.6
Hoxb3P09026 Gm8899-201ENSMUST00000214635 1332 ntBASIC11.29□□□□□ -0.6
Hoxb3P09026 Foxh1-201ENSMUST00000037824 1306 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Hoxb3P09026 Dolpp1-203ENSMUST00000123202 2294 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Hoxb3P09026 Dolpp1-201ENSMUST00000028209 2251 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Hoxb3P09026 Tmem201-202ENSMUST00000103208 3620 ntAPPRIS P3 TSL 1 (best) BASIC11.29□□□□□ -0.6
Hoxb3P09026 Mdh1b-201ENSMUST00000114094 1719 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Hoxb3P09026 Neu2-207ENSMUST00000172222 1715 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Hoxb3P09026 4933434E20Rik-206ENSMUST00000160640 2510 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Hoxb3P09026 Lnx1-201ENSMUST00000039744 2727 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Hoxb3P09026 Med12l-203ENSMUST00000040846 3747 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Hoxb3P09026 Col15a1-203ENSMUST00000107730 1755 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Hoxb3P09026 Sparcl1-201ENSMUST00000031249 2759 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Hoxb3P09026 Rprd1b-203ENSMUST00000109518 4399 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Hoxb3P09026 Rgp1-202ENSMUST00000107886 5888 ntAPPRIS P1 TSL 5 BASIC11.28□□□□□ -0.6
Hoxb3P09026 Gm15941-205ENSMUST00000140044 1825 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Hoxb3P09026 Foxj3-202ENSMUST00000106310 4660 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Hoxb3P09026 Gm44190-201ENSMUST00000205083 1401 ntBASIC11.28□□□□□ -0.6
Hoxb3P09026 Casp4-201ENSMUST00000027012 1435 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Hoxb3P09026 Setd1a-202ENSMUST00000047157 5927 ntAPPRIS P1 TSL 5 BASIC11.28□□□□□ -0.6
Hoxb3P09026 Ppp1r18-203ENSMUST00000127442 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Hoxb3P09026 Nrg1-211ENSMUST00000208497 2096 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Hoxb3P09026 Pfn4-204ENSMUST00000219503 4775 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Hoxb3P09026 Adam22-203ENSMUST00000088744 9245 ntAPPRIS ALT2 TSL 5 BASIC11.28□□□□□ -0.6
Hoxb3P09026 Pfkfb3-220ENSMUST00000192949 4801 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Hoxb3P09026 Ank3-201ENSMUST00000047061 2517 ntTSL 5 BASIC11.28□□□□□ -0.6
Hoxb3P09026 Hhipl2-202ENSMUST00000192527 2310 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Hoxb3P09026 Capns1-202ENSMUST00000108196 1192 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Hoxb3P09026 Gm15374-201ENSMUST00000119313 844 ntBASIC11.28□□□□□ -0.6
Hoxb3P09026 Gm15403-201ENSMUST00000119343 1227 ntBASIC11.28□□□□□ -0.6
Hoxb3P09026 Olfr1003-ps1-201ENSMUST00000122238 717 ntBASIC11.28□□□□□ -0.6
Hoxb3P09026 Gm12696-201ENSMUST00000122361 905 ntBASIC11.28□□□□□ -0.6
Hoxb3P09026 Gm11789-203ENSMUST00000140645 737 ntTSL 2 BASIC11.28□□□□□ -0.6
Hoxb3P09026 Mid1-ps1-201ENSMUST00000167967 1248 ntBASIC11.28□□□□□ -0.6
Hoxb3P09026 V1rd19-201ENSMUST00000173571 1157 ntAPPRIS P1 BASIC11.28□□□□□ -0.6
Hoxb3P09026 Stard6-206ENSMUST00000174118 1185 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Hoxb3P09026 4930505M18Rik-201ENSMUST00000175854 1288 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Hoxb3P09026 Gm26653-201ENSMUST00000181537 1214 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Hoxb3P09026 Gm7765-201ENSMUST00000182585 974 ntBASIC11.28□□□□□ -0.6
Hoxb3P09026 Gm27005-201ENSMUST00000182783 921 ntBASIC11.28□□□□□ -0.6
Hoxb3P09026 Platr10-202ENSMUST00000191479 818 ntBASIC11.28□□□□□ -0.6
Hoxb3P09026 Gm38063-201ENSMUST00000193990 342 ntBASIC11.28□□□□□ -0.6
Hoxb3P09026 Gm18561-201ENSMUST00000206027 804 ntBASIC11.28□□□□□ -0.6
Hoxb3P09026 Gm30052-201ENSMUST00000211951 913 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 86.1 ms