Protein–RNA interactions for Protein: P02831

Hoxa3, Homeobox protein Hox-A3, mousemouse

Predictions only

Length 443 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxa3P02831 Itga11-201ENSMUST00000034774 4969 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
Hoxa3P02831 Zfp558-202ENSMUST00000034647 1701 ntAPPRIS P1 TSL 5 BASIC9.25□□□□□ -0.93
Hoxa3P02831 1700123L14Rik-201ENSMUST00000090061 1747 ntAPPRIS P1 BASIC9.25□□□□□ -0.93
Hoxa3P02831 Ebf2-203ENSMUST00000176161 5204 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
Hoxa3P02831 Fkbp15-204ENSMUST00000107461 2337 ntAPPRIS ALT2 TSL 1 (best) BASIC9.25□□□□□ -0.93
Hoxa3P02831 Pip4k2c-201ENSMUST00000013970 3307 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
Hoxa3P02831 Tmem134-216ENSMUST00000171743 3701 ntTSL 5 BASIC9.25□□□□□ -0.93
Hoxa3P02831 Tle6-210ENSMUST00000142948 1961 ntAPPRIS ALT2 TSL 1 (best) BASIC9.24□□□□□ -0.93
Hoxa3P02831 Gm26642-201ENSMUST00000180981 2782 ntTSL 1 (best) BASIC9.24□□□□□ -0.93
Hoxa3P02831 Cit-201ENSMUST00000051704 9514 ntAPPRIS P2 TSL 1 (best) BASIC9.24□□□□□ -0.93
Hoxa3P02831 Pkp4-201ENSMUST00000037903 4378 ntTSL 5 BASIC9.24□□□□□ -0.93
Hoxa3P02831 Myh1-203ENSMUST00000124516 6081 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
Hoxa3P02831 Cdc20b-203ENSMUST00000181117 1608 ntAPPRIS ALT2 TSL 5 BASIC9.24□□□□□ -0.93
Hoxa3P02831 Gm7278-201ENSMUST00000119836 1401 ntBASIC9.24□□□□□ -0.93
Hoxa3P02831 Rbm10-205ENSMUST00000115375 3698 ntAPPRIS ALT2 TSL 1 (best) BASIC9.24□□□□□ -0.93
Hoxa3P02831 Wdr36-201ENSMUST00000053663 3281 ntAPPRIS P4 TSL 1 (best) BASIC9.24□□□□□ -0.93
Hoxa3P02831 Pcdhga7-201ENSMUST00000192511 4730 ntAPPRIS P2 TSL 1 (best) BASIC9.24□□□□□ -0.93
Hoxa3P02831 Gmeb1-201ENSMUST00000030733 2485 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
Hoxa3P02831 A130010J15Rik-204ENSMUST00000161235 2097 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
Hoxa3P02831 6030407O03Rik-201ENSMUST00000189514 2094 ntTSL 1 (best) BASIC9.24□□□□□ -0.93
Hoxa3P02831 Alas2-202ENSMUST00000112715 1892 ntAPPRIS ALT2 TSL 1 (best) BASIC9.24□□□□□ -0.93
Hoxa3P02831 Golga2-203ENSMUST00000113377 4361 ntAPPRIS ALT2 TSL 5 BASIC9.24□□□□□ -0.93
Hoxa3P02831 Nsd3-210ENSMUST00000153597 1865 ntTSL 1 (best) BASIC9.24□□□□□ -0.93
Hoxa3P02831 Slit2-202ENSMUST00000170109 7758 ntAPPRIS ALT2 TSL 5 BASIC9.24□□□□□ -0.93
Hoxa3P02831 Slit2-217ENSMUST00000174421 7785 ntTSL 1 (best) BASIC9.24□□□□□ -0.93
Hoxa3P02831 Arap1-201ENSMUST00000084895 4404 ntTSL 1 (best) BASIC9.24□□□□□ -0.93
Hoxa3P02831 Usp2-203ENSMUST00000114830 2122 ntTSL 1 (best) BASIC9.24□□□□□ -0.93
Hoxa3P02831 Gm9133-201ENSMUST00000118289 540 ntBASIC9.24□□□□□ -0.93
Hoxa3P02831 Gm12179-201ENSMUST00000118344 1272 ntBASIC9.24□□□□□ -0.93
Hoxa3P02831 Gm4993-201ENSMUST00000118719 1174 ntBASIC9.24□□□□□ -0.93
Hoxa3P02831 Gm6322-201ENSMUST00000118789 1004 ntBASIC9.24□□□□□ -0.93
Hoxa3P02831 Rbmx2-ps-201ENSMUST00000119377 930 ntBASIC9.24□□□□□ -0.93
Hoxa3P02831 C1qtnf7-202ENSMUST00000121872 1283 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
Hoxa3P02831 4930506C21Rik-203ENSMUST00000130639 909 ntTSL 1 (best) BASIC9.24□□□□□ -0.93
Hoxa3P02831 Gm45716-203ENSMUST00000153734 644 ntAPPRIS P1 TSL 5 BASIC9.24□□□□□ -0.93
Hoxa3P02831 Gm22379-201ENSMUST00000157480 131 ntBASIC9.24□□□□□ -0.93
Hoxa3P02831 Gm15996-201ENSMUST00000161925 762 ntTSL 5 BASIC9.24□□□□□ -0.93
Hoxa3P02831 Smyd1-205ENSMUST00000173297 947 ntTSL 5 BASIC9.24□□□□□ -0.93
Hoxa3P02831 Gm19246-201ENSMUST00000173599 255 ntBASIC9.24□□□□□ -0.93
Hoxa3P02831 Fut8-203ENSMUST00000177595 2980 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
Hoxa3P02831 1110059E24Rik-205ENSMUST00000178523 629 ntTSL 3 BASIC9.24□□□□□ -0.93
Hoxa3P02831 2610027F03Rik-202ENSMUST00000186982 603 ntTSL 5 BASIC9.24□□□□□ -0.93
Hoxa3P02831 Gm28306-201ENSMUST00000191315 529 ntTSL 5 BASIC9.24□□□□□ -0.93
Hoxa3P02831 Gm36991-201ENSMUST00000191800 648 ntBASIC9.24□□□□□ -0.93
Hoxa3P02831 Gm9369-201ENSMUST00000196009 733 ntBASIC9.24□□□□□ -0.93
Hoxa3P02831 Gm44755-201ENSMUST00000207830 2102 ntBASIC9.24□□□□□ -0.93
Hoxa3P02831 Gm29797-201ENSMUST00000207856 755 ntAPPRIS P1 TSL 5 BASIC9.24□□□□□ -0.93
Hoxa3P02831 AC154305.2-201ENSMUST00000225813 901 ntBASIC9.24□□□□□ -0.93
Hoxa3P02831 AC159002.1-201ENSMUST00000226714 924 ntBASIC9.24□□□□□ -0.93
Hoxa3P02831 Sapcd1-201ENSMUST00000040151 935 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
Hoxa3P02831 4921508M14Rik-201ENSMUST00000061679 1099 ntBASIC9.24□□□□□ -0.93
Hoxa3P02831 1700029P11Rik-201ENSMUST00000074608 1024 ntAPPRIS P1 BASIC9.24□□□□□ -0.93
Hoxa3P02831 Timeless-201ENSMUST00000055539 4457 ntAPPRIS P3 TSL 1 (best) BASIC9.24□□□□□ -0.93
Hoxa3P02831 Mtmr11-201ENSMUST00000054356 2778 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
Hoxa3P02831 Ets2-201ENSMUST00000023612 3890 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
Hoxa3P02831 Rsc1a1-201ENSMUST00000105782 1749 ntAPPRIS P1 BASIC9.24□□□□□ -0.93
Hoxa3P02831 Vtn-201ENSMUST00000017488 1744 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
Hoxa3P02831 Flicr-201ENSMUST00000144719 3455 ntTSL 1 (best) BASIC9.24□□□□□ -0.93
Hoxa3P02831 Gtf2i-216ENSMUST00000173888 2820 ntTSL 5 BASIC9.24□□□□□ -0.93
Hoxa3P02831 Rps9-202ENSMUST00000108623 1347 ntTSL 1 (best) BASIC9.24□□□□□ -0.93
Hoxa3P02831 Nop16-201ENSMUST00000026987 1756 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
Hoxa3P02831 Uspl1-201ENSMUST00000050472 3757 ntAPPRIS P4 TSL 1 (best) BASIC9.24□□□□□ -0.93
Hoxa3P02831 Mcm2-201ENSMUST00000058011 3371 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
Hoxa3P02831 Ces3a-201ENSMUST00000093222 2046 ntAPPRIS P4 TSL 1 (best) BASIC9.24□□□□□ -0.93
Hoxa3P02831 Gm10803-201ENSMUST00000099692 2483 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
Hoxa3P02831 Gm45206-201ENSMUST00000206885 2285 ntBASIC9.24□□□□□ -0.93
Hoxa3P02831 Mybph-201ENSMUST00000038445 1828 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
Hoxa3P02831 Lrtm2-204ENSMUST00000168793 3407 ntAPPRIS P1 TSL 5 BASIC9.24□□□□□ -0.93
Hoxa3P02831 4833422M21Rik-203ENSMUST00000181747 1365 ntTSL 1 (best) BASIC9.24□□□□□ -0.93
Hoxa3P02831 Gm9915-201ENSMUST00000066196 1383 ntBASIC9.24□□□□□ -0.93
Hoxa3P02831 Dlec1-208ENSMUST00000165231 5263 ntAPPRIS P2 TSL 5 BASIC9.24□□□□□ -0.93
Hoxa3P02831 Sema4a-201ENSMUST00000029700 3205 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
Hoxa3P02831 Nrap-204ENSMUST00000166203 5079 ntAPPRIS ALT2 TSL 5 BASIC9.24□□□□□ -0.93
Hoxa3P02831 Rgs12-203ENSMUST00000114280 2777 ntTSL 1 (best) BASIC9.24□□□□□ -0.93
Hoxa3P02831 Pbx1-208ENSMUST00000188912 3970 ntTSL 1 (best) BASIC9.23□□□□□ -0.93
Hoxa3P02831 Myo18a-224ENSMUST00000172303 6339 ntAPPRIS ALT2 TSL 1 (best) BASIC9.23□□□□□ -0.93
Hoxa3P02831 Nup50-201ENSMUST00000165443 4741 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
Hoxa3P02831 Copz1-201ENSMUST00000100162 1669 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
Hoxa3P02831 Stkld1-201ENSMUST00000055406 2169 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
Hoxa3P02831 Gm38115-201ENSMUST00000194317 2413 ntTSL 5 BASIC9.23□□□□□ -0.93
Hoxa3P02831 Gtf2i-219ENSMUST00000174155 4141 ntAPPRIS P4 TSL 2 BASIC9.23□□□□□ -0.93
Hoxa3P02831 Nnt-203ENSMUST00000109204 3198 ntTSL 5 BASIC9.23□□□□□ -0.93
Hoxa3P02831 Derl2-206ENSMUST00000143850 3666 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
Hoxa3P02831 Ttc17-203ENSMUST00000111237 4409 ntAPPRIS P1 TSL 5 BASIC9.23□□□□□ -0.93
Hoxa3P02831 AC167022.1-201ENSMUST00000218647 1458 ntBASIC9.23□□□□□ -0.93
Hoxa3P02831 Gm45416-201ENSMUST00000209713 2201 ntBASIC9.23□□□□□ -0.93
Hoxa3P02831 Lamb1-201ENSMUST00000002979 5784 ntTSL 1 (best) BASIC9.23□□□□□ -0.93
Hoxa3P02831 Piwil1-201ENSMUST00000086056 4016 ntAPPRIS P2 TSL 1 (best) BASIC9.23□□□□□ -0.93
Hoxa3P02831 BC034090-201ENSMUST00000035914 3797 ntAPPRIS ALT2 TSL 1 (best) BASIC9.23□□□□□ -0.93
Hoxa3P02831 Sipa1l2-202ENSMUST00000212168 6586 ntAPPRIS ALT2 TSL 1 (best) BASIC9.23□□□□□ -0.93
Hoxa3P02831 Fbxl18-202ENSMUST00000110766 7857 ntAPPRIS ALT2 TSL 1 (best) BASIC9.23□□□□□ -0.93
Hoxa3P02831 Vps54-201ENSMUST00000006221 4323 ntAPPRIS P3 TSL 1 (best) BASIC9.23□□□□□ -0.93
Hoxa3P02831 Cacna1c-219ENSMUST00000189389 6603 ntAPPRIS ALT2 TSL 5 BASIC9.23□□□□□ -0.93
Hoxa3P02831 Gtf2h5-202ENSMUST00000100955 879 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
Hoxa3P02831 Trgv2-201ENSMUST00000103563 491 ntAPPRIS P1 BASIC9.23□□□□□ -0.93
Hoxa3P02831 Gm12316-201ENSMUST00000125853 406 ntTSL 5 BASIC9.23□□□□□ -0.93
Hoxa3P02831 Gm15726-201ENSMUST00000144738 509 ntTSL 3 BASIC9.23□□□□□ -0.93
Hoxa3P02831 Gm14266-202ENSMUST00000146542 1067 ntTSL 1 (best) BASIC9.23□□□□□ -0.93
Hoxa3P02831 Gm16081-201ENSMUST00000155992 684 ntTSL 3 BASIC9.23□□□□□ -0.93
Hoxa3P02831 Gm24248-201ENSMUST00000157321 322 ntBASIC9.23□□□□□ -0.93
Retrieved 100 of 76,532 protein–RNA pairs in 79.7 ms