Protein–RNA interactions for Protein: P01575

Ifnb1, Interferon beta, mousemouse

Predictions only

Length 182 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ifnb1P01575 Scgb2b2-201ENSMUST00000038835 520 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Ifnb1P01575 BC030499-201ENSMUST00000046361 959 ntAPPRIS P1 TSL 5 BASIC11.56□□□□□ -0.56
Ifnb1P01575 Slc17a5-201ENSMUST00000052441 3236 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Ifnb1P01575 Krt33b-201ENSMUST00000073890 1581 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Ifnb1P01575 Gm13652-201ENSMUST00000143898 3412 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Ifnb1P01575 Tnc-203ENSMUST00000107372 7106 ntAPPRIS ALT2 TSL 5 BASIC11.56□□□□□ -0.56
Ifnb1P01575 Nfkbiz-202ENSMUST00000096026 4067 ntAPPRIS ALT2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Ifnb1P01575 9130227L01Rik-202ENSMUST00000189293 1906 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Ifnb1P01575 Lrrc8b-201ENSMUST00000112707 6726 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Ifnb1P01575 Cenpn-203ENSMUST00000212263 1616 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Ifnb1P01575 Ralgps1-202ENSMUST00000091039 2738 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Ifnb1P01575 Lmo3-206ENSMUST00000163024 1331 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Ifnb1P01575 Oard1-202ENSMUST00000167180 1324 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Ifnb1P01575 Mylk3-202ENSMUST00000121972 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Ifnb1P01575 Gm16169-202ENSMUST00000162432 2128 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Ifnb1P01575 Gm44617-202ENSMUST00000209122 2763 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Ifnb1P01575 Clu-201ENSMUST00000022616 1810 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Ifnb1P01575 Ddr1-202ENSMUST00000097333 3593 ntAPPRIS ALT2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Ifnb1P01575 Slc16a1-201ENSMUST00000046212 4426 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Ifnb1P01575 Tnpo3-201ENSMUST00000012679 4251 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Ifnb1P01575 Ptpn21-202ENSMUST00000170188 5562 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Ifnb1P01575 Gpc6-202ENSMUST00000088483 3488 ntAPPRIS P3 TSL 5 BASIC11.55□□□□□ -0.56
Ifnb1P01575 Unkl-202ENSMUST00000039734 4779 ntAPPRIS P1 TSL 5 BASIC11.55□□□□□ -0.56
Ifnb1P01575 Gtf3c6-206ENSMUST00000217537 2526 ntAPPRIS P2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Ifnb1P01575 2700068H02Rik-201ENSMUST00000137882 1872 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Ifnb1P01575 Poc5-201ENSMUST00000099295 5183 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Ifnb1P01575 Zmynd8-205ENSMUST00000109266 5072 ntAPPRIS P4 TSL 1 (best) BASIC11.55□□□□□ -0.56
Ifnb1P01575 Tnfsf13b-203ENSMUST00000207792 4771 ntAPPRIS P3 TSL 1 (best) BASIC11.55□□□□□ -0.56
Ifnb1P01575 Acnat2-202ENSMUST00000107698 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Ifnb1P01575 Gm21103-202ENSMUST00000170923 1761 ntAPPRIS P5 TSL 5 BASIC11.55□□□□□ -0.56
Ifnb1P01575 Sgsm1-202ENSMUST00000057209 4339 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Ifnb1P01575 Skap1-206ENSMUST00000107663 742 ntTSL 3 BASIC11.55□□□□□ -0.56
Ifnb1P01575 AC158605.1-201ENSMUST00000156803 764 ntTSL 3 BASIC11.55□□□□□ -0.56
Ifnb1P01575 Gm25226-201ENSMUST00000158198 123 ntBASIC11.55□□□□□ -0.56
Ifnb1P01575 Gm16570-201ENSMUST00000161951 436 ntBASIC11.55□□□□□ -0.56
Ifnb1P01575 Dusp3-207ENSMUST00000176261 496 ntTSL 3 BASIC11.55□□□□□ -0.56
Ifnb1P01575 1110036E04Rik-201ENSMUST00000181151 777 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Ifnb1P01575 Gm37800-202ENSMUST00000193667 553 ntTSL 3 BASIC11.55□□□□□ -0.56
Ifnb1P01575 A430050A11Rik-201ENSMUST00000195348 646 ntBASIC11.55□□□□□ -0.56
Ifnb1P01575 9530034A14Rik-201ENSMUST00000197919 1083 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Ifnb1P01575 Gm42859-201ENSMUST00000199572 193 ntBASIC11.55□□□□□ -0.56
Ifnb1P01575 AC027700.1-201ENSMUST00000213965 370 ntTSL 5 BASIC11.55□□□□□ -0.56
Ifnb1P01575 AC118476.3-201ENSMUST00000216419 1219 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Ifnb1P01575 Gm4065-202ENSMUST00000218911 986 ntTSL 3 BASIC11.55□□□□□ -0.56
Ifnb1P01575 CT030637.1-201ENSMUST00000228016 669 ntBASIC11.55□□□□□ -0.56
Ifnb1P01575 Fkbpl-201ENSMUST00000036720 1270 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Ifnb1P01575 Gm6430-201ENSMUST00000054664 1248 ntBASIC11.55□□□□□ -0.56
Ifnb1P01575 Wfdc6a-201ENSMUST00000099096 805 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Ifnb1P01575 Amz1-202ENSMUST00000120630 4037 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Ifnb1P01575 Trpv1-203ENSMUST00000108470 2667 ntTSL 5 BASIC11.55□□□□□ -0.56
Ifnb1P01575 Gm6268-201ENSMUST00000115253 1453 ntAPPRIS P1 TSL 5 BASIC11.55□□□□□ -0.56
Ifnb1P01575 1500002C15Rik-201ENSMUST00000178987 2183 ntBASIC11.55□□□□□ -0.56
Ifnb1P01575 Gm20758-201ENSMUST00000220339 2171 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Ifnb1P01575 Vmn1r45-202ENSMUST00000226167 2893 ntBASIC11.55□□□□□ -0.56
Ifnb1P01575 Sptan1-204ENSMUST00000113717 7958 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Ifnb1P01575 Sept2-201ENSMUST00000027495 3779 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Ifnb1P01575 Gm46355-201ENSMUST00000221434 1671 ntTSL 5 BASIC11.55□□□□□ -0.56
Ifnb1P01575 Mei4-203ENSMUST00000189832 2578 ntAPPRIS ALT2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Ifnb1P01575 Rad18-204ENSMUST00000113182 2220 ntAPPRIS ALT2 TSL 5 BASIC11.55□□□□□ -0.56
Ifnb1P01575 Prox1-203ENSMUST00000177288 3144 ntAPPRIS P1 TSL 5 BASIC11.55□□□□□ -0.56
Ifnb1P01575 Rpe65-202ENSMUST00000196999 1863 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Ifnb1P01575 Catsper1-201ENSMUST00000043380 2061 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Ifnb1P01575 Sphk2-202ENSMUST00000107737 3548 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Ifnb1P01575 AI854703-201ENSMUST00000095938 3517 ntAPPRIS P1 TSL 2 BASIC11.55□□□□□ -0.56
Ifnb1P01575 BC049352-203ENSMUST00000171799 1714 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Ifnb1P01575 Sod3-201ENSMUST00000101208 3738 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Ifnb1P01575 Csgalnact1-201ENSMUST00000078350 3943 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Ifnb1P01575 Zmym3-209ENSMUST00000121520 5564 ntAPPRIS ALT2 TSL 5 BASIC11.54□□□□□ -0.56
Ifnb1P01575 Fscn3-201ENSMUST00000031719 1902 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Ifnb1P01575 Olfr1428-203ENSMUST00000214103 2127 ntAPPRIS P1 TSL 5 BASIC11.54□□□□□ -0.56
Ifnb1P01575 Arhgap24-205ENSMUST00000112853 2853 ntTSL 5 BASIC11.54□□□□□ -0.56
Ifnb1P01575 4632404M16Rik-201ENSMUST00000197326 2882 ntBASIC11.54□□□□□ -0.56
Ifnb1P01575 Galr1-201ENSMUST00000065224 2871 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Ifnb1P01575 Ccdc93-202ENSMUST00000112621 2338 ntAPPRIS ALT1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Ifnb1P01575 Atcayos-203ENSMUST00000150782 3057 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Ifnb1P01575 Ptgfr-201ENSMUST00000029670 6624 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Ifnb1P01575 Vwa5b2-207ENSMUST00000159780 4042 ntAPPRIS ALT2 TSL 5 BASIC11.54□□□□□ -0.56
Ifnb1P01575 Tmem181b-ps-201ENSMUST00000167717 1413 ntBASIC11.54□□□□□ -0.56
Ifnb1P01575 4930486L24Rik-201ENSMUST00000091569 1432 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Ifnb1P01575 Axin2-202ENSMUST00000106711 2551 ntAPPRIS ALT2 TSL 5 BASIC11.54□□□□□ -0.56
Ifnb1P01575 4930432L08Rik-201ENSMUST00000132154 1608 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Ifnb1P01575 Csrnp3-208ENSMUST00000176109 2958 ntAPPRIS ALT2 TSL 5 BASIC11.54□□□□□ -0.56
Ifnb1P01575 AC090962.2-201ENSMUST00000225064 1801 ntBASIC11.54□□□□□ -0.56
Ifnb1P01575 Plekhn1-204ENSMUST00000218699 3196 ntTSL 2 BASIC11.54□□□□□ -0.56
Ifnb1P01575 Tfip11-201ENSMUST00000031288 3560 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Ifnb1P01575 Zfp110-201ENSMUST00000004614 3591 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Ifnb1P01575 Kcnk10-201ENSMUST00000110113 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Ifnb1P01575 Rnft2-201ENSMUST00000117177 4381 ntAPPRIS P3 TSL 1 (best) BASIC11.54□□□□□ -0.56
Ifnb1P01575 Bcl2-202ENSMUST00000189999 2841 ntBASIC11.54□□□□□ -0.56
Ifnb1P01575 Calu-201ENSMUST00000031779 3229 ntAPPRIS P5 TSL 1 (best) BASIC11.54□□□□□ -0.56
Ifnb1P01575 A230006K03Rik-201ENSMUST00000107533 977 ntTSL 5 BASIC11.54□□□□□ -0.56
Ifnb1P01575 Eapp-202ENSMUST00000110713 886 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Ifnb1P01575 Cspp1-204ENSMUST00000119714 1268 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Ifnb1P01575 Gm11728-201ENSMUST00000150628 660 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Ifnb1P01575 Slc2a4rg-ps-202ENSMUST00000176590 1143 ntBASIC11.54□□□□□ -0.56
Ifnb1P01575 Gm23771-201ENSMUST00000178702 110 ntBASIC11.54□□□□□ -0.56
Ifnb1P01575 Gm9211-201ENSMUST00000182882 975 ntBASIC11.54□□□□□ -0.56
Ifnb1P01575 Gm7985-201ENSMUST00000183329 981 ntBASIC11.54□□□□□ -0.56
Ifnb1P01575 1700088E04Rik-203ENSMUST00000186053 535 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Ifnb1P01575 4833445I07Rik-202ENSMUST00000194104 579 ntTSL 3 BASIC11.54□□□□□ -0.56
Retrieved 100 of 76,532 protein–RNA pairs in 60.6 ms