Protein–RNA interactions for Protein: O89079

Cope, Coatomer subunit epsilon, mousemouse

Predictions only

Length 308 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CopeO89079 Gm7255-201ENSMUST00000187371 908 ntBASIC11.28□□□□□ -0.6
CopeO89079 Gm6905-201ENSMUST00000205729 511 ntBASIC11.28□□□□□ -0.6
CopeO89079 D530033B14Rik-202ENSMUST00000206282 216 ntBASIC11.28□□□□□ -0.6
CopeO89079 Gm45572-201ENSMUST00000211774 750 ntTSL 5 BASIC11.28□□□□□ -0.6
CopeO89079 Gm2517-201ENSMUST00000215651 348 ntBASIC11.28□□□□□ -0.6
CopeO89079 Gm33979-201ENSMUST00000219486 691 ntTSL 5 BASIC11.28□□□□□ -0.6
CopeO89079 Immp1l-201ENSMUST00000037499 955 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
CopeO89079 1600002K03Rik-201ENSMUST00000041882 678 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
CopeO89079 Olfr450-201ENSMUST00000067503 933 ntAPPRIS P1 BASIC11.28□□□□□ -0.6
CopeO89079 Vmn1r220-201ENSMUST00000072385 897 ntAPPRIS P1 BASIC11.28□□□□□ -0.6
CopeO89079 Ccl21a-201ENSMUST00000095114 870 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
CopeO89079 Slc7a4-201ENSMUST00000063544 2758 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
CopeO89079 Cacna1f-201ENSMUST00000115725 6028 ntAPPRIS ALT2 TSL 5 BASIC11.28□□□□□ -0.6
CopeO89079 Fam234a-202ENSMUST00000118487 2629 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
CopeO89079 Mylk3-202ENSMUST00000121972 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
CopeO89079 Dmrtc1b-203ENSMUST00000118842 1321 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
CopeO89079 Ptpre-205ENSMUST00000210833 2209 ntAPPRIS P3 TSL 1 (best) BASIC11.28□□□□□ -0.6
CopeO89079 Prph2-201ENSMUST00000024773 2665 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
CopeO89079 Fam90a1b-201ENSMUST00000044989 2939 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
CopeO89079 Krt33b-201ENSMUST00000073890 1581 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
CopeO89079 Ints3-201ENSMUST00000029542 4337 ntAPPRIS P2 TSL 1 (best) BASIC11.28□□□□□ -0.6
CopeO89079 Gfi1b-204ENSMUST00000164290 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
CopeO89079 4933411K16Rik-201ENSMUST00000164518 1380 ntAPPRIS P1 BASIC11.28□□□□□ -0.6
CopeO89079 Shroom2-201ENSMUST00000062317 6997 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.6
CopeO89079 Phf8-203ENSMUST00000112662 3732 ntAPPRIS P3 TSL 5 BASIC11.27□□□□□ -0.6
CopeO89079 Ankrd11-201ENSMUST00000098333 7995 ntAPPRIS ALT2 TSL 5 BASIC11.27□□□□□ -0.6
CopeO89079 Eif4e1b-201ENSMUST00000110003 2131 ntAPPRIS P3 TSL 2 BASIC11.27□□□□□ -0.6
CopeO89079 Fos-201ENSMUST00000021674 2108 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
CopeO89079 Pnkd-202ENSMUST00000087225 2859 ntTSL 1 (best) BASIC11.27□□□□□ -0.6
CopeO89079 Caprin1-202ENSMUST00000111147 4069 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
CopeO89079 Myo18a-223ENSMUST00000169105 6475 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.6
CopeO89079 Zmynd8-221ENSMUST00000177633 5093 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.6
CopeO89079 Srp54b-202ENSMUST00000218879 3642 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
CopeO89079 Megf10-201ENSMUST00000075770 7514 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
CopeO89079 AC122367.1-201ENSMUST00000221978 1709 ntBASIC11.27□□□□□ -0.61
CopeO89079 Cct3-201ENSMUST00000001452 1977 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
CopeO89079 Adra1a-202ENSMUST00000159068 4282 ntAPPRIS P1 TSL 2 BASIC11.27□□□□□ -0.61
CopeO89079 Gm5795-201ENSMUST00000100920 984 ntAPPRIS P2 TSL 5 BASIC11.27□□□□□ -0.61
CopeO89079 Hist1h3d-201ENSMUST00000105105 1249 ntAPPRIS P1 BASIC11.27□□□□□ -0.61
CopeO89079 Rps3-202ENSMUST00000107096 952 ntTSL 3 BASIC11.27□□□□□ -0.61
CopeO89079 Gm13035-201ENSMUST00000117496 342 ntBASIC11.27□□□□□ -0.61
CopeO89079 Gm16066-201ENSMUST00000118575 1086 ntTSL 3 BASIC11.27□□□□□ -0.61
CopeO89079 Dctn6-203ENSMUST00000118811 934 ntTSL 3 BASIC11.27□□□□□ -0.61
CopeO89079 Gm14396-201ENSMUST00000126966 548 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
CopeO89079 Zfp629-204ENSMUST00000128731 823 ntTSL 3 BASIC11.27□□□□□ -0.61
CopeO89079 Mcfd2-205ENSMUST00000145895 751 ntTSL 2 BASIC11.27□□□□□ -0.61
CopeO89079 Gm3685-201ENSMUST00000169215 984 ntAPPRIS P5 TSL 5 BASIC11.27□□□□□ -0.61
CopeO89079 Gm17040-202ENSMUST00000170597 889 ntBASIC11.27□□□□□ -0.61
CopeO89079 Gm43916-201ENSMUST00000205062 967 ntBASIC11.27□□□□□ -0.61
CopeO89079 Gm31941-201ENSMUST00000209689 350 ntBASIC11.27□□□□□ -0.61
CopeO89079 Nt5dc1-206ENSMUST00000213269 802 ntTSL 5 BASIC11.27□□□□□ -0.61
CopeO89079 Btg4-203ENSMUST00000213680 1282 ntAPPRIS P2 TSL 1 (best) BASIC11.27□□□□□ -0.61
CopeO89079 AC122024.3-201ENSMUST00000217719 294 ntBASIC11.27□□□□□ -0.61
CopeO89079 Gm12216-207ENSMUST00000220191 1073 ntAPPRIS P5 TSL 5 BASIC11.27□□□□□ -0.61
CopeO89079 CT030170.2-201ENSMUST00000223267 126 ntBASIC11.27□□□□□ -0.61
CopeO89079 1700128F08Rik-201ENSMUST00000034483 1110 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
CopeO89079 Rassf8-202ENSMUST00000058538 1131 ntBASIC11.27□□□□□ -0.61
CopeO89079 Wfdc21-201ENSMUST00000070832 434 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
CopeO89079 1700007G11Rik-201ENSMUST00000080333 861 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
CopeO89079 Gm10020-201ENSMUST00000081993 612 ntBASIC11.27□□□□□ -0.61
CopeO89079 Taar7d-201ENSMUST00000092657 1077 ntAPPRIS P1 BASIC11.27□□□□□ -0.61
CopeO89079 Gm10338-201ENSMUST00000096148 984 ntAPPRIS P1 TSL 2 BASIC11.27□□□□□ -0.61
CopeO89079 Acot11-202ENSMUST00000102762 5689 ntAPPRIS P3 TSL 1 (best) BASIC11.27□□□□□ -0.61
CopeO89079 Ccdc62-202ENSMUST00000165148 3920 ntAPPRIS P1 TSL 5 BASIC11.27□□□□□ -0.61
CopeO89079 Gm18198-201ENSMUST00000204986 1551 ntBASIC11.27□□□□□ -0.61
CopeO89079 AC122382.1-201ENSMUST00000225869 2371 ntBASIC11.27□□□□□ -0.61
CopeO89079 Slitrk4-202ENSMUST00000114679 3513 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
CopeO89079 Irf9-202ENSMUST00000130697 2459 ntAPPRIS P3 TSL 1 (best) BASIC11.27□□□□□ -0.61
CopeO89079 5330439B14Rik-201ENSMUST00000194811 1392 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
CopeO89079 Tgfb1i1-201ENSMUST00000070656 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.61
CopeO89079 Zfp330-201ENSMUST00000034147 1675 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
CopeO89079 Rbbp5-201ENSMUST00000027700 3385 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
CopeO89079 Gm5766-201ENSMUST00000160520 1977 ntBASIC11.27□□□□□ -0.61
CopeO89079 Atp6v1c2-208ENSMUST00000221129 1425 ntAPPRIS P1 TSL 5 BASIC11.26□□□□□ -0.61
CopeO89079 Aldh3a1-202ENSMUST00000108716 1721 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
CopeO89079 Orc4-201ENSMUST00000028098 4066 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
CopeO89079 Elmo2-201ENSMUST00000071699 3247 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
CopeO89079 Ifi211-201ENSMUST00000009340 1785 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
CopeO89079 Klhl7-201ENSMUST00000030841 2966 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
CopeO89079 Dchs1-201ENSMUST00000078482 10754 ntAPPRIS P1 TSL 5 BASIC11.26□□□□□ -0.61
CopeO89079 Aldoa-201ENSMUST00000032934 1511 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
CopeO89079 C130013H08Rik-201ENSMUST00000197569 3692 ntBASIC11.26□□□□□ -0.61
CopeO89079 Hspa5-201ENSMUST00000028222 3672 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
CopeO89079 Pcdh20-202ENSMUST00000192557 3362 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
CopeO89079 Pnpla3-201ENSMUST00000045289 4640 ntAPPRIS P1 TSL 5 BASIC11.26□□□□□ -0.61
CopeO89079 C2-206ENSMUST00000152417 2157 ntTSL 5 BASIC11.26□□□□□ -0.61
CopeO89079 Ly6e-202ENSMUST00000169343 2154 ntAPPRIS P1 TSL 5 BASIC11.26□□□□□ -0.61
CopeO89079 Hemk1-201ENSMUST00000035196 2192 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
CopeO89079 Otog-201ENSMUST00000164538 10043 ntAPPRIS P1 TSL 5 BASIC11.26□□□□□ -0.61
CopeO89079 Bsdc1-201ENSMUST00000048162 2823 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
CopeO89079 Gm45699-201ENSMUST00000212838 1576 ntTSL 2 BASIC11.26□□□□□ -0.61
CopeO89079 Gm22920-201ENSMUST00000102175 109 ntBASIC11.26□□□□□ -0.61
CopeO89079 Ighg2c-201ENSMUST00000103416 1214 ntAPPRIS P5 BASIC11.26□□□□□ -0.61
CopeO89079 Gm7851-201ENSMUST00000117574 323 ntBASIC11.26□□□□□ -0.61
CopeO89079 Gm15528-201ENSMUST00000117821 864 ntBASIC11.26□□□□□ -0.61
CopeO89079 Gm14208-201ENSMUST00000119645 678 ntBASIC11.26□□□□□ -0.61
CopeO89079 Spx-202ENSMUST00000126521 357 ntAPPRIS P2 TSL 5 BASIC11.26□□□□□ -0.61
CopeO89079 Gm15829-201ENSMUST00000145415 869 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
CopeO89079 Gm25492-201ENSMUST00000157383 129 ntBASIC11.26□□□□□ -0.61
CopeO89079 Prr3-206ENSMUST00000173585 770 ntAPPRIS ALT2 TSL 2 BASIC11.26□□□□□ -0.61
Retrieved 100 of 76,532 protein–RNA pairs in 37.9 ms