Protein–RNA interactions for Protein: F7BJK1

Pcdh1, Protocadherin 1 (Fragment), mousemouse

Predictions only

Length 1,077 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh1F7BJK1 Tnnt3-206ENSMUST00000105944 753 ntAPPRIS ALT2 TSL 1 (best) BASIC9.89□□□□□ -0.83
Pcdh1F7BJK1 Tnnt3-210ENSMUST00000105948 753 ntAPPRIS ALT2 TSL 1 (best) BASIC9.89□□□□□ -0.83
Pcdh1F7BJK1 Tnnt3-212ENSMUST00000105950 1037 ntAPPRIS ALT2 TSL 5 BASIC9.89□□□□□ -0.83
Pcdh1F7BJK1 Gm22711-201ENSMUST00000116890 133 ntBASIC9.89□□□□□ -0.83
Pcdh1F7BJK1 Gm15528-201ENSMUST00000117821 864 ntBASIC9.89□□□□□ -0.83
Pcdh1F7BJK1 Rab15-202ENSMUST00000118604 778 ntTSL 3 BASIC9.89□□□□□ -0.83
Pcdh1F7BJK1 Rab15-203ENSMUST00000121716 739 ntTSL 3 BASIC9.89□□□□□ -0.83
Pcdh1F7BJK1 Gm12962-202ENSMUST00000144212 691 ntTSL 2 BASIC9.89□□□□□ -0.83
Pcdh1F7BJK1 H2al1i-201ENSMUST00000164729 318 ntAPPRIS P1 BASIC9.89□□□□□ -0.83
Pcdh1F7BJK1 Tnnt3-224ENSMUST00000169299 1013 ntAPPRIS ALT2 TSL 5 BASIC9.89□□□□□ -0.83
Pcdh1F7BJK1 H2al1h-201ENSMUST00000177926 318 ntAPPRIS P1 BASIC9.89□□□□□ -0.83
Pcdh1F7BJK1 H2al1d-201ENSMUST00000178595 318 ntAPPRIS P1 BASIC9.89□□□□□ -0.83
Pcdh1F7BJK1 H2al1c-201ENSMUST00000178806 318 ntAPPRIS P1 BASIC9.89□□□□□ -0.83
Pcdh1F7BJK1 H2al1f-201ENSMUST00000179004 318 ntAPPRIS P1 BASIC9.89□□□□□ -0.83
Pcdh1F7BJK1 Tnnt3-226ENSMUST00000180152 1067 ntAPPRIS ALT2 TSL 5 BASIC9.89□□□□□ -0.83
Pcdh1F7BJK1 Gstp-ps-201ENSMUST00000195526 631 ntBASIC9.89□□□□□ -0.83
Pcdh1F7BJK1 Gm45186-201ENSMUST00000206874 478 ntBASIC9.89□□□□□ -0.83
Pcdh1F7BJK1 Gm33175-201ENSMUST00000211562 461 ntTSL 5 BASIC9.89□□□□□ -0.83
Pcdh1F7BJK1 Gm9111-201ENSMUST00000219394 709 ntBASIC9.89□□□□□ -0.83
Pcdh1F7BJK1 Gm18515-201ENSMUST00000219755 797 ntBASIC9.89□□□□□ -0.83
Pcdh1F7BJK1 AC124171.1-201ENSMUST00000221151 567 ntTSL 5 BASIC9.89□□□□□ -0.83
Pcdh1F7BJK1 Cmtm2b-201ENSMUST00000041973 880 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Pcdh1F7BJK1 Cryba2-201ENSMUST00000006721 720 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Pcdh1F7BJK1 Olfr450-201ENSMUST00000067503 933 ntAPPRIS P1 BASIC9.89□□□□□ -0.83
Pcdh1F7BJK1 Vmn1r220-201ENSMUST00000072385 897 ntAPPRIS P1 BASIC9.89□□□□□ -0.83
Pcdh1F7BJK1 Cbx3-ps1-201ENSMUST00000091539 545 ntBASIC9.89□□□□□ -0.83
Pcdh1F7BJK1 Gm21811-201ENSMUST00000096485 930 ntBASIC9.89□□□□□ -0.83
Pcdh1F7BJK1 Ccdc190-201ENSMUST00000094348 1731 ntAPPRIS P3 TSL 1 (best) BASIC9.89□□□□□ -0.83
Pcdh1F7BJK1 Myh1-203ENSMUST00000124516 6081 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Pcdh1F7BJK1 Gm21115-201ENSMUST00000187565 2578 ntBASIC9.89□□□□□ -0.83
Pcdh1F7BJK1 Pklr-201ENSMUST00000047111 2787 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
Pcdh1F7BJK1 Sema4g-201ENSMUST00000026225 4548 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Pcdh1F7BJK1 Trem1-201ENSMUST00000048782 2993 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Pcdh1F7BJK1 Papln-201ENSMUST00000021646 4260 ntAPPRIS P3 TSL 1 (best) BASIC9.89□□□□□ -0.83
Pcdh1F7BJK1 Zmym3-209ENSMUST00000121520 5564 ntAPPRIS ALT2 TSL 5 BASIC9.89□□□□□ -0.83
Pcdh1F7BJK1 Gm27177-201ENSMUST00000183339 2946 ntTSL 5 BASIC9.89□□□□□ -0.83
Pcdh1F7BJK1 Fam90a1b-201ENSMUST00000044989 2939 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Pcdh1F7BJK1 Pigo-202ENSMUST00000098109 4239 ntAPPRIS P3 TSL 1 (best) BASIC9.89□□□□□ -0.83
Pcdh1F7BJK1 Skp2-201ENSMUST00000096482 3118 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Pcdh1F7BJK1 Dcaf11-206ENSMUST00000128490 2660 ntAPPRIS P2 TSL 2 BASIC9.89□□□□□ -0.83
Pcdh1F7BJK1 Gm45234-201ENSMUST00000129411 4359 ntAPPRIS P1 TSL 2 BASIC9.89□□□□□ -0.83
Pcdh1F7BJK1 Capn3-206ENSMUST00000110721 2898 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
Pcdh1F7BJK1 Gpi1-201ENSMUST00000038027 2884 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Pcdh1F7BJK1 Sult1a1-201ENSMUST00000106371 1370 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
Pcdh1F7BJK1 Sult1a1-202ENSMUST00000106372 1369 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
Pcdh1F7BJK1 Gm6170-201ENSMUST00000187672 1388 ntBASIC9.88□□□□□ -0.83
Pcdh1F7BJK1 Zfp964-203ENSMUST00000204285 4333 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
Pcdh1F7BJK1 Fan1-201ENSMUST00000163289 3460 ntAPPRIS P1 TSL 5 BASIC9.88□□□□□ -0.83
Pcdh1F7BJK1 Ntrk2-207ENSMUST00000225488 4706 ntAPPRIS P1 BASIC9.88□□□□□ -0.83
Pcdh1F7BJK1 Hmgb2-201ENSMUST00000067925 2628 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
Pcdh1F7BJK1 Fbxo43-201ENSMUST00000058643 4035 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
Pcdh1F7BJK1 Arhgap24-202ENSMUST00000073302 3151 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
Pcdh1F7BJK1 Zmynd11-206ENSMUST00000110637 3770 ntTSL 5 BASIC9.88□□□□□ -0.83
Pcdh1F7BJK1 Olfr520-202ENSMUST00000220185 1330 ntAPPRIS P1 TSL 5 BASIC9.88□□□□□ -0.83
Pcdh1F7BJK1 Pdlim2-201ENSMUST00000022681 1523 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
Pcdh1F7BJK1 Gm29151-201ENSMUST00000196669 2513 ntTSL 5 BASIC9.88□□□□□ -0.83
Pcdh1F7BJK1 Atad5-201ENSMUST00000017694 7272 ntAPPRIS P2 TSL 1 (best) BASIC9.88□□□□□ -0.83
Pcdh1F7BJK1 Brat1-203ENSMUST00000110806 3854 ntAPPRIS ALT2 TSL 1 (best) BASIC9.88□□□□□ -0.83
Pcdh1F7BJK1 C230021G24Rik-201ENSMUST00000181196 3679 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
Pcdh1F7BJK1 Prg4-201ENSMUST00000006171 1869 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
Pcdh1F7BJK1 Gm45218-201ENSMUST00000205533 1678 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
Pcdh1F7BJK1 4933424N20Rik-201ENSMUST00000200749 1463 ntBASIC9.88□□□□□ -0.83
Pcdh1F7BJK1 Nipsnap3b-202ENSMUST00000107665 848 ntTSL 2 BASIC9.88□□□□□ -0.83
Pcdh1F7BJK1 Cdk2ap1-202ENSMUST00000111472 648 ntAPPRIS ALT1 TSL 5 BASIC9.88□□□□□ -0.83
Pcdh1F7BJK1 Apoo-204ENSMUST00000113898 784 ntAPPRIS P1 TSL 3 BASIC9.88□□□□□ -0.83
Pcdh1F7BJK1 Csf1-204ENSMUST00000120654 821 ntTSL 3 BASIC9.88□□□□□ -0.83
Pcdh1F7BJK1 Gm15595-201ENSMUST00000120840 961 ntBASIC9.88□□□□□ -0.83
Pcdh1F7BJK1 2410003L11Rik-202ENSMUST00000145262 642 ntTSL 3 BASIC9.88□□□□□ -0.83
Pcdh1F7BJK1 Gzmc-201ENSMUST00000015585 894 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
Pcdh1F7BJK1 Gstt3-203ENSMUST00000173537 687 ntTSL 3 BASIC9.88□□□□□ -0.83
Pcdh1F7BJK1 Gm7741-201ENSMUST00000181445 989 ntBASIC9.88□□□□□ -0.83
Pcdh1F7BJK1 Gm7985-201ENSMUST00000183329 981 ntBASIC9.88□□□□□ -0.83
Pcdh1F7BJK1 Gm5733-201ENSMUST00000190232 939 ntBASIC9.88□□□□□ -0.83
Pcdh1F7BJK1 4933401J01Rik-201ENSMUST00000193812 1070 ntBASIC9.88□□□□□ -0.83
Pcdh1F7BJK1 Lgals4-207ENSMUST00000208971 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC9.88□□□□□ -0.83
Pcdh1F7BJK1 Gm12216-207ENSMUST00000220191 1073 ntAPPRIS P5 TSL 5 BASIC9.88□□□□□ -0.83
Pcdh1F7BJK1 1700128F08Rik-201ENSMUST00000034483 1110 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
Pcdh1F7BJK1 1600002K03Rik-201ENSMUST00000041882 678 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
Pcdh1F7BJK1 Olfr173-201ENSMUST00000049940 1164 ntAPPRIS P1 BASIC9.88□□□□□ -0.83
Pcdh1F7BJK1 Kcnk7-201ENSMUST00000052448 1226 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
Pcdh1F7BJK1 Try10-201ENSMUST00000072103 860 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
Pcdh1F7BJK1 Gm12166-201ENSMUST00000093169 958 ntAPPRIS P1 BASIC9.88□□□□□ -0.83
Pcdh1F7BJK1 Olfr553-201ENSMUST00000098222 981 ntAPPRIS P1 BASIC9.88□□□□□ -0.83
Pcdh1F7BJK1 Gm12296-201ENSMUST00000144922 3220 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
Pcdh1F7BJK1 Sox13-203ENSMUST00000144386 3179 ntAPPRIS ALT2 TSL 1 (best) BASIC9.88□□□□□ -0.83
Pcdh1F7BJK1 Ank3-204ENSMUST00000092432 5832 ntAPPRIS ALT2 TSL 5 BASIC9.88□□□□□ -0.83
Pcdh1F7BJK1 Gm43307-201ENSMUST00000199465 2371 ntBASIC9.88□□□□□ -0.83
Pcdh1F7BJK1 6030466F02Rik-201ENSMUST00000212339 1434 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
Pcdh1F7BJK1 Cx3cl1-201ENSMUST00000034230 3315 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
Pcdh1F7BJK1 Myt1l-201ENSMUST00000021009 5027 ntAPPRIS ALT2 TSL 1 (best) BASIC9.88□□□□□ -0.83
Pcdh1F7BJK1 Tacc2-205ENSMUST00000207282 3464 ntAPPRIS ALT2 TSL 1 (best) BASIC9.88□□□□□ -0.83
Pcdh1F7BJK1 Pnma2-201ENSMUST00000089236 5518 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
Pcdh1F7BJK1 St6galnac4-201ENSMUST00000102818 3626 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
Pcdh1F7BJK1 Camk2b-207ENSMUST00000101586 1590 ntTSL 5 BASIC9.88□□□□□ -0.83
Pcdh1F7BJK1 Krt33b-201ENSMUST00000073890 1581 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
Pcdh1F7BJK1 6430562O15Rik-201ENSMUST00000180491 2488 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
Pcdh1F7BJK1 Zer1-201ENSMUST00000044751 4100 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
Pcdh1F7BJK1 Hcar2-201ENSMUST00000057145 1930 ntAPPRIS P1 BASIC9.88□□□□□ -0.83
Pcdh1F7BJK1 Fam161a-201ENSMUST00000058269 1927 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
Pcdh1F7BJK1 Akap12-202ENSMUST00000215696 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC9.88□□□□□ -0.83
Retrieved 100 of 76,532 protein–RNA pairs in 52.9 ms