Protein–RNA interactions for Protein: Q99PQ2

Trim11, E3 ubiquitin-protein ligase TRIM11, mousemouse

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim11Q99PQ2 4930523C07Rik-202ENSMUST00000097513 300 ntAPPRIS P1 BASIC12.55□□□□□ -0.4
Trim11Q99PQ2 Gm10701-201ENSMUST00000098926 906 ntTSL 2 BASIC12.55□□□□□ -0.4
Trim11Q99PQ2 Gm5766-201ENSMUST00000160520 1977 ntBASIC12.55□□□□□ -0.4
Trim11Q99PQ2 Lpo-201ENSMUST00000103177 2926 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trim11Q99PQ2 App-206ENSMUST00000227723 8167 ntAPPRIS ALT2 BASIC12.55□□□□□ -0.4
Trim11Q99PQ2 Rtn4ip1-201ENSMUST00000054418 2981 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trim11Q99PQ2 Foxh1-201ENSMUST00000037824 1306 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trim11Q99PQ2 Bsnd-201ENSMUST00000054472 2756 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trim11Q99PQ2 Mier1-204ENSMUST00000106857 4752 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trim11Q99PQ2 Man2b2-201ENSMUST00000031002 3330 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trim11Q99PQ2 Fbxo8-201ENSMUST00000040218 3571 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trim11Q99PQ2 Optc-201ENSMUST00000124051 1885 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trim11Q99PQ2 Mkl1-204ENSMUST00000134469 4392 ntTSL 5 BASIC12.55□□□□□ -0.4
Trim11Q99PQ2 Optc-205ENSMUST00000153617 1615 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Trim11Q99PQ2 C130021I20Rik-201ENSMUST00000147294 3693 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Trim11Q99PQ2 Pigb-206ENSMUST00000184035 3221 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trim11Q99PQ2 Cfap54-201ENSMUST00000020200 2473 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
Trim11Q99PQ2 Oxct1-201ENSMUST00000110690 3527 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trim11Q99PQ2 Pde1b-205ENSMUST00000227955 3258 ntAPPRIS ALT1 BASIC12.54□□□□□ -0.4
Trim11Q99PQ2 Sgsm1-202ENSMUST00000057209 4339 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Trim11Q99PQ2 Armc9-201ENSMUST00000027434 5127 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Trim11Q99PQ2 Tle6-210ENSMUST00000142948 1961 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trim11Q99PQ2 Syn2-203ENSMUST00000203450 3806 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trim11Q99PQ2 Wwp2-204ENSMUST00000212205 2758 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Trim11Q99PQ2 E330034L11Rik-201ENSMUST00000200640 1742 ntBASIC12.54□□□□□ -0.4
Trim11Q99PQ2 AC158355.1-201ENSMUST00000215895 1705 ntBASIC12.54□□□□□ -0.4
Trim11Q99PQ2 Spdye4a-203ENSMUST00000195900 1496 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
Trim11Q99PQ2 Ptbp1-202ENSMUST00000095457 2598 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trim11Q99PQ2 Scamp2-201ENSMUST00000045791 2340 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trim11Q99PQ2 Ptgr2-207ENSMUST00000146377 2073 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trim11Q99PQ2 CT009713.5-203ENSMUST00000224218 2079 ntBASIC12.54□□□□□ -0.4
Trim11Q99PQ2 Tiam1-203ENSMUST00000114122 4596 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Trim11Q99PQ2 4930555B11Rik-201ENSMUST00000123210 1533 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Trim11Q99PQ2 Xlr4c-201ENSMUST00000068551 1500 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
Trim11Q99PQ2 Tmod2-202ENSMUST00000098552 9871 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trim11Q99PQ2 Mkx-201ENSMUST00000079788 3202 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trim11Q99PQ2 Zfp646-201ENSMUST00000050383 6310 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trim11Q99PQ2 Siglec1-203ENSMUST00000110227 5790 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trim11Q99PQ2 Zfp606-202ENSMUST00000123589 3509 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Trim11Q99PQ2 Gm14942-201ENSMUST00000119642 336 ntBASIC12.54□□□□□ -0.4
Trim11Q99PQ2 AU015836-201ENSMUST00000120624 674 ntTSL 3 BASIC12.54□□□□□ -0.4
Trim11Q99PQ2 Tmem204-202ENSMUST00000153745 902 ntTSL 2 BASIC12.54□□□□□ -0.4
Trim11Q99PQ2 Gm7255-201ENSMUST00000187371 908 ntBASIC12.54□□□□□ -0.4
Trim11Q99PQ2 Calca-205ENSMUST00000205933 458 ntTSL 3 BASIC12.54□□□□□ -0.4
Trim11Q99PQ2 Olfr293-201ENSMUST00000081474 1011 ntAPPRIS P1 BASIC12.54□□□□□ -0.4
Trim11Q99PQ2 Taar7d-201ENSMUST00000092657 1077 ntAPPRIS P1 BASIC12.54□□□□□ -0.4
Trim11Q99PQ2 Rassf4-201ENSMUST00000035842 6460 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trim11Q99PQ2 Tnpo3-201ENSMUST00000012679 4251 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trim11Q99PQ2 Gm4900-201ENSMUST00000222046 1628 ntBASIC12.54□□□□□ -0.4
Trim11Q99PQ2 Gm5420-201ENSMUST00000071008 2206 ntTSL 2 BASIC12.54□□□□□ -0.4
Trim11Q99PQ2 Acsbg1-201ENSMUST00000034822 2880 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trim11Q99PQ2 5033403F01Rik-201ENSMUST00000181376 1678 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Trim11Q99PQ2 Slc25a17-201ENSMUST00000023040 1667 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trim11Q99PQ2 Gm16168-201ENSMUST00000161091 1359 ntTSL 3 BASIC12.54□□□□□ -0.4
Trim11Q99PQ2 C030037D09Rik-203ENSMUST00000138007 3220 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Trim11Q99PQ2 Mrrf-201ENSMUST00000028250 2623 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trim11Q99PQ2 Tmem140-201ENSMUST00000074949 2614 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trim11Q99PQ2 Rnf20-201ENSMUST00000029989 4154 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trim11Q99PQ2 Gm4846-201ENSMUST00000143922 1744 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trim11Q99PQ2 Dnmbp-206ENSMUST00000212592 3901 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Trim11Q99PQ2 C4b-201ENSMUST00000069507 5379 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trim11Q99PQ2 Tasp1-202ENSMUST00000099304 2127 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Trim11Q99PQ2 Olfr1349-206ENSMUST00000213656 4492 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
Trim11Q99PQ2 Papln-201ENSMUST00000021646 4260 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trim11Q99PQ2 Gm10646-201ENSMUST00000213227 3293 ntTSL 2 BASIC12.53□□□□□ -0.4
Trim11Q99PQ2 Hyal2-206ENSMUST00000195681 2968 ntBASIC12.53□□□□□ -0.4
Trim11Q99PQ2 Gpr37-202ENSMUST00000200812 3035 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Trim11Q99PQ2 Habp2-201ENSMUST00000078284 2314 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
Trim11Q99PQ2 Flcn-203ENSMUST00000102697 3437 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trim11Q99PQ2 Slc25a44-202ENSMUST00000168755 3418 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Trim11Q99PQ2 Wsb2-ps-201ENSMUST00000117937 1217 ntBASIC12.53□□□□□ -0.4
Trim11Q99PQ2 Gm12986-201ENSMUST00000119037 967 ntBASIC12.53□□□□□ -0.4
Trim11Q99PQ2 Gm14585-201ENSMUST00000120713 634 ntBASIC12.53□□□□□ -0.4
Trim11Q99PQ2 Dmrtc1a-204ENSMUST00000121197 1067 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trim11Q99PQ2 Gm13605-201ENSMUST00000124489 658 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Trim11Q99PQ2 1700125G22Rik-201ENSMUST00000181124 861 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Trim11Q99PQ2 Mrpl20-206ENSMUST00000185148 494 ntTSL 3 BASIC12.53□□□□□ -0.4
Trim11Q99PQ2 Gm38321-201ENSMUST00000195053 235 ntBASIC12.53□□□□□ -0.4
Trim11Q99PQ2 Gm42626-201ENSMUST00000196866 1148 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Trim11Q99PQ2 Gm45878-201ENSMUST00000211839 241 ntBASIC12.53□□□□□ -0.4
Trim11Q99PQ2 Gm45765-201ENSMUST00000212027 1035 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Trim11Q99PQ2 AC154589.2-201ENSMUST00000228847 251 ntBASIC12.53□□□□□ -0.4
Trim11Q99PQ2 Krtap5-1-201ENSMUST00000084413 588 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
Trim11Q99PQ2 Olfr553-201ENSMUST00000098222 981 ntAPPRIS P1 BASIC12.53□□□□□ -0.4
Trim11Q99PQ2 Clip1-202ENSMUST00000063905 4589 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
Trim11Q99PQ2 Anks1b-233ENSMUST00000183156 4248 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
Trim11Q99PQ2 Hipk2-204ENSMUST00000160360 3907 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Trim11Q99PQ2 Timm22-201ENSMUST00000021203 2817 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trim11Q99PQ2 Bmp3-203ENSMUST00000200388 6609 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Trim11Q99PQ2 Tmprss5-202ENSMUST00000165088 2895 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trim11Q99PQ2 Anp32e-204ENSMUST00000168106 2890 ntTSL 5 BASIC12.53□□□□□ -0.4
Trim11Q99PQ2 Col24a1-201ENSMUST00000029848 7143 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trim11Q99PQ2 Tyro3-202ENSMUST00000110783 4460 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trim11Q99PQ2 Abcg2-202ENSMUST00000114294 2178 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
Trim11Q99PQ2 Tubb2b-201ENSMUST00000075774 2182 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trim11Q99PQ2 Mdm1-201ENSMUST00000020437 3074 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trim11Q99PQ2 Rpap1-201ENSMUST00000048493 4744 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trim11Q99PQ2 Aqr-202ENSMUST00000102543 4352 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trim11Q99PQ2 Ccdc96-201ENSMUST00000060100 3585 ntAPPRIS P1 BASIC12.53□□□□□ -0.4
Trim11Q99PQ2 Phactr1-213ENSMUST00000148891 5307 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 38.4 ms