Protein–RNA interactions for Protein: Q99PE5

Smim3, Small integral membrane protein 3, mousemouse

Predictions only

Length 60 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smim3Q99PE5 Arhgap17-203ENSMUST00000167309 3372 ntAPPRIS ALT2 TSL 1 (best) BASIC9.27□□□□□ -0.93
Smim3Q99PE5 Gad1-201ENSMUST00000094934 3355 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
Smim3Q99PE5 Sez6l-206ENSMUST00000212758 2664 ntTSL 5 BASIC9.27□□□□□ -0.93
Smim3Q99PE5 Epb41-204ENSMUST00000105970 5059 ntAPPRIS ALT2 TSL 5 BASIC9.27□□□□□ -0.93
Smim3Q99PE5 B430119L08Rik-201ENSMUST00000130054 1994 ntTSL 1 (best) BASIC9.27□□□□□ -0.93
Smim3Q99PE5 Lsm2-202ENSMUST00000114011 840 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
Smim3Q99PE5 Gm15207-201ENSMUST00000119259 442 ntBASIC9.27□□□□□ -0.93
Smim3Q99PE5 Uox-202ENSMUST00000121133 768 ntTSL 5 BASIC9.27□□□□□ -0.93
Smim3Q99PE5 Mup-ps29-201ENSMUST00000122281 202 ntBASIC9.27□□□□□ -0.93
Smim3Q99PE5 1500011K16Rik-201ENSMUST00000135091 800 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
Smim3Q99PE5 9430093N23Rik-201ENSMUST00000152494 515 ntTSL 1 (best) BASIC9.27□□□□□ -0.93
Smim3Q99PE5 Gm15853-201ENSMUST00000160268 556 ntTSL 1 (best) BASIC9.27□□□□□ -0.93
Smim3Q99PE5 Gm3096-201ENSMUST00000185770 364 ntBASIC9.27□□□□□ -0.93
Smim3Q99PE5 Gm28085-201ENSMUST00000189281 1137 ntTSL 1 (best) BASIC9.27□□□□□ -0.93
Smim3Q99PE5 Gm42859-201ENSMUST00000199572 193 ntBASIC9.27□□□□□ -0.93
Smim3Q99PE5 Letm2-213ENSMUST00000211422 738 ntTSL 5 BASIC9.27□□□□□ -0.93
Smim3Q99PE5 Gm45856-201ENSMUST00000212752 416 ntBASIC9.27□□□□□ -0.93
Smim3Q99PE5 Wfdc1-202ENSMUST00000212901 921 ntAPPRIS ALT2 TSL 1 (best) BASIC9.27□□□□□ -0.93
Smim3Q99PE5 AC125206.1-201ENSMUST00000214070 739 ntTSL 5 BASIC9.27□□□□□ -0.93
Smim3Q99PE5 AC087891.2-201ENSMUST00000219293 658 ntTSL 5 BASIC9.27□□□□□ -0.93
Smim3Q99PE5 AC159002.1-201ENSMUST00000226714 924 ntBASIC9.27□□□□□ -0.93
Smim3Q99PE5 AC126253.1-201ENSMUST00000227974 824 ntBASIC9.27□□□□□ -0.93
Smim3Q99PE5 Prss34-201ENSMUST00000037453 1216 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
Smim3Q99PE5 Cldnd2-201ENSMUST00000040227 664 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
Smim3Q99PE5 Fam162a-201ENSMUST00000004057 635 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
Smim3Q99PE5 Fam83c-201ENSMUST00000029143 3972 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
Smim3Q99PE5 Sncaip-203ENSMUST00000163742 3272 ntAPPRIS P3 TSL 5 BASIC9.27□□□□□ -0.93
Smim3Q99PE5 Serpina16-202ENSMUST00000164148 1582 ntAPPRIS P1 TSL 5 BASIC9.27□□□□□ -0.93
Smim3Q99PE5 AC164099.2-201ENSMUST00000227795 2005 ntAPPRIS P1 BASIC9.27□□□□□ -0.93
Smim3Q99PE5 Adamtsl2-201ENSMUST00000091233 3612 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
Smim3Q99PE5 4930432K21Rik-201ENSMUST00000093375 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC9.27□□□□□ -0.93
Smim3Q99PE5 Gm43972-201ENSMUST00000181398 1467 ntBASIC9.27□□□□□ -0.93
Smim3Q99PE5 Gm16486-201ENSMUST00000212436 4584 ntAPPRIS P1 TSL 5 BASIC9.27□□□□□ -0.93
Smim3Q99PE5 Gm7168-201ENSMUST00000088809 1603 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
Smim3Q99PE5 Bloc1s5-201ENSMUST00000035899 5634 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
Smim3Q99PE5 Filip1l-202ENSMUST00000159414 3253 ntTSL 1 (best) BASIC9.27□□□□□ -0.93
Smim3Q99PE5 Tacr1-202ENSMUST00000203775 4933 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
Smim3Q99PE5 Slitrk1-201ENSMUST00000100322 5359 ntAPPRIS P1 BASIC9.27□□□□□ -0.93
Smim3Q99PE5 Sfi1-218ENSMUST00000153425 3759 ntAPPRIS ALT2 TSL 5 BASIC9.26□□□□□ -0.93
Smim3Q99PE5 Copb1-201ENSMUST00000033012 3346 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
Smim3Q99PE5 Micall2-204ENSMUST00000170773 3157 ntTSL 1 (best) BASIC9.26□□□□□ -0.93
Smim3Q99PE5 Oprm1-216ENSMUST00000105611 2420 ntTSL 1 (best) BASIC9.26□□□□□ -0.93
Smim3Q99PE5 Casq2-205ENSMUST00000165540 2434 ntAPPRIS ALT2 TSL 1 (best) BASIC9.26□□□□□ -0.93
Smim3Q99PE5 Tmem126b-201ENSMUST00000032843 2259 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
Smim3Q99PE5 Nfrkb-201ENSMUST00000086167 5161 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
Smim3Q99PE5 Aldoa-201ENSMUST00000032934 1511 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
Smim3Q99PE5 Gm6170-201ENSMUST00000187672 1388 ntBASIC9.26□□□□□ -0.93
Smim3Q99PE5 Il1r1-201ENSMUST00000027241 5819 ntAPPRIS P3 TSL 1 (best) BASIC9.26□□□□□ -0.93
Smim3Q99PE5 Ralgps2-202ENSMUST00000063199 2947 ntAPPRIS P3 TSL 1 (best) BASIC9.26□□□□□ -0.93
Smim3Q99PE5 Nudt7-203ENSMUST00000109109 2795 ntAPPRIS ALT2 TSL 1 (best) BASIC9.26□□□□□ -0.93
Smim3Q99PE5 Gm16677-201ENSMUST00000181229 2174 ntTSL 1 (best) BASIC9.26□□□□□ -0.93
Smim3Q99PE5 Gm27174-201ENSMUST00000184493 2174 ntTSL 1 (best) BASIC9.26□□□□□ -0.93
Smim3Q99PE5 Gm15612-201ENSMUST00000147542 3118 ntTSL 2 BASIC9.26□□□□□ -0.93
Smim3Q99PE5 Polr2a-201ENSMUST00000058470 6740 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
Smim3Q99PE5 Fndc7-202ENSMUST00000102620 3477 ntAPPRIS P3 TSL 1 (best) BASIC9.26□□□□□ -0.93
Smim3Q99PE5 Ralgps2-203ENSMUST00000171292 3346 ntAPPRIS P3 TSL 5 BASIC9.26□□□□□ -0.93
Smim3Q99PE5 Mllt10-201ENSMUST00000028076 4917 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
Smim3Q99PE5 Skiv2l-201ENSMUST00000046022 3951 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
Smim3Q99PE5 Timm10b-204ENSMUST00000106784 494 ntTSL 3 BASIC9.26□□□□□ -0.93
Smim3Q99PE5 Snrnp27-202ENSMUST00000113683 1005 ntTSL 1 (best) BASIC9.26□□□□□ -0.93
Smim3Q99PE5 Avpr2-203ENSMUST00000114395 936 ntTSL 1 (best) BASIC9.26□□□□□ -0.93
Smim3Q99PE5 Thegl-203ENSMUST00000118941 746 ntTSL 3 BASIC9.26□□□□□ -0.93
Smim3Q99PE5 Rbm3-ps-201ENSMUST00000121422 465 ntBASIC9.26□□□□□ -0.93
Smim3Q99PE5 4930557F10Rik-201ENSMUST00000155432 630 ntTSL 1 (best) BASIC9.26□□□□□ -0.93
Smim3Q99PE5 Gm17058-201ENSMUST00000168951 928 ntTSL 5 BASIC9.26□□□□□ -0.93
Smim3Q99PE5 Cdk3-ps-202ENSMUST00000174177 915 ntAPPRIS P1 TSL 5 BASIC9.26□□□□□ -0.93
Smim3Q99PE5 8030442B05Rik-201ENSMUST00000192626 1035 ntTSL 1 (best) BASIC9.26□□□□□ -0.93
Smim3Q99PE5 Gm43133-201ENSMUST00000197472 463 ntBASIC9.26□□□□□ -0.93
Smim3Q99PE5 Ghrl-204ENSMUST00000203770 891 ntAPPRIS P3 TSL 1 (best) BASIC9.26□□□□□ -0.93
Smim3Q99PE5 Gm32633-201ENSMUST00000205726 587 ntTSL 3 BASIC9.26□□□□□ -0.93
Smim3Q99PE5 Fxyd2-211ENSMUST00000216289 668 ntTSL 5 BASIC9.26□□□□□ -0.93
Smim3Q99PE5 AC140406.1-201ENSMUST00000226481 465 ntBASIC9.26□□□□□ -0.93
Smim3Q99PE5 Cript-201ENSMUST00000024959 1184 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
Smim3Q99PE5 Cox7a2-201ENSMUST00000034881 659 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
Smim3Q99PE5 Gm42971-201ENSMUST00000199228 2079 ntBASIC9.26□□□□□ -0.93
Smim3Q99PE5 Colq-205ENSMUST00000150054 2867 ntTSL 5 BASIC9.26□□□□□ -0.93
Smim3Q99PE5 Gcc1-201ENSMUST00000064377 2859 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
Smim3Q99PE5 Pde11a-201ENSMUST00000099992 4189 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
Smim3Q99PE5 Dock7-201ENSMUST00000030286 7127 ntAPPRIS ALT2 TSL 5 BASIC9.26□□□□□ -0.93
Smim3Q99PE5 Nmt1-201ENSMUST00000021314 4861 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
Smim3Q99PE5 Usp45-201ENSMUST00000040429 5861 ntAPPRIS ALT2 TSL 1 (best) BASIC9.26□□□□□ -0.93
Smim3Q99PE5 Sh3rf2-201ENSMUST00000072008 5092 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
Smim3Q99PE5 Gpm6b-205ENSMUST00000112227 3294 ntAPPRIS ALT1 TSL 1 (best) BASIC9.26□□□□□ -0.93
Smim3Q99PE5 Cdcp2-201ENSMUST00000062495 2611 ntAPPRIS P2 TSL 1 (best) BASIC9.26□□□□□ -0.93
Smim3Q99PE5 Scnn1b-201ENSMUST00000033161 2478 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
Smim3Q99PE5 Rangap1-201ENSMUST00000052374 2954 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
Smim3Q99PE5 Rabl2-202ENSMUST00000094056 1322 ntTSL 1 (best) BASIC9.26□□□□□ -0.93
Smim3Q99PE5 Gm36975-201ENSMUST00000194105 1828 ntTSL 1 (best) BASIC9.26□□□□□ -0.93
Smim3Q99PE5 Gm32219-201ENSMUST00000221234 1819 ntTSL 5 BASIC9.26□□□□□ -0.93
Smim3Q99PE5 Adgre5-202ENSMUST00000075843 3000 ntAPPRIS P3 TSL 1 (best) BASIC9.26□□□□□ -0.93
Smim3Q99PE5 Hist4h4-201ENSMUST00000179285 2863 ntAPPRIS P1 BASIC9.26□□□□□ -0.93
Smim3Q99PE5 Trim6-206ENSMUST00000214578 1506 ntTSL 5 BASIC9.26□□□□□ -0.93
Smim3Q99PE5 Clec12b-201ENSMUST00000032261 1521 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
Smim3Q99PE5 Nek5-201ENSMUST00000169834 2404 ntAPPRIS P3 TSL 1 (best) BASIC9.25□□□□□ -0.93
Smim3Q99PE5 Slc6a9-202ENSMUST00000063857 3146 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
Smim3Q99PE5 Dnmt1-202ENSMUST00000177754 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC9.25□□□□□ -0.93
Smim3Q99PE5 Riok3-201ENSMUST00000025270 3661 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
Smim3Q99PE5 Brca2-201ENSMUST00000044620 10724 ntAPPRIS P1 TSL 5 BASIC9.25□□□□□ -0.93
Smim3Q99PE5 Ywhag-201ENSMUST00000055808 3520 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
Smim3Q99PE5 Tmem130-201ENSMUST00000061446 2805 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
Retrieved 100 of 76,532 protein–RNA pairs in 40.1 ms