Protein–RNA interactions for Protein: Q99M85

Scrt1, Transcriptional repressor scratch 1, mousemouse

Predictions only

Length 348 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scrt1Q99M85 Dpt-201ENSMUST00000027861 1724 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Scrt1Q99M85 Zfp280d-205ENSMUST00000183468 1834 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
Scrt1Q99M85 Cpne9-201ENSMUST00000041203 2777 ntAPPRIS P1 TSL 5 BASIC9.7□□□□□ -0.86
Scrt1Q99M85 Zc3hc1-202ENSMUST00000102992 1865 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
Scrt1Q99M85 Plekha6-203ENSMUST00000186917 4820 ntAPPRIS P2 TSL 1 (best) BASIC9.7□□□□□ -0.86
Scrt1Q99M85 Slc24a5-201ENSMUST00000070353 1954 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Scrt1Q99M85 Ctdspl2-201ENSMUST00000036647 5053 ntAPPRIS P3 TSL 1 (best) BASIC9.7□□□□□ -0.86
Scrt1Q99M85 Fga-201ENSMUST00000029630 2083 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
Scrt1Q99M85 Myo18a-211ENSMUST00000130627 6202 ntAPPRIS ALT2 TSL 5 BASIC9.7□□□□□ -0.86
Scrt1Q99M85 Trappc11-201ENSMUST00000039061 4332 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Scrt1Q99M85 Tmem168-206ENSMUST00000149123 3337 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
Scrt1Q99M85 Gm26684-202ENSMUST00000228229 8257 ntBASIC9.7□□□□□ -0.86
Scrt1Q99M85 Ints6-202ENSMUST00000223585 10883 ntAPPRIS P1 BASIC9.7□□□□□ -0.86
Scrt1Q99M85 Cetn2-203ENSMUST00000114551 1286 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Scrt1Q99M85 Gm15172-201ENSMUST00000118945 1046 ntBASIC9.7□□□□□ -0.86
Scrt1Q99M85 Gm14441-201ENSMUST00000121960 540 ntBASIC9.7□□□□□ -0.86
Scrt1Q99M85 4930507D10Rik-201ENSMUST00000137411 1152 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
Scrt1Q99M85 Gm20495-201ENSMUST00000173902 235 ntBASIC9.7□□□□□ -0.86
Scrt1Q99M85 Gm26272-201ENSMUST00000179241 132 ntBASIC9.7□□□□□ -0.86
Scrt1Q99M85 AU020206-201ENSMUST00000181224 656 ntTSL 2 BASIC9.7□□□□□ -0.86
Scrt1Q99M85 1700001J11Rik-201ENSMUST00000185917 759 ntBASIC9.7□□□□□ -0.86
Scrt1Q99M85 1700109G14Rik-202ENSMUST00000188538 754 ntTSL 3 BASIC9.7□□□□□ -0.86
Scrt1Q99M85 Gm6606-201ENSMUST00000193613 947 ntBASIC9.7□□□□□ -0.86
Scrt1Q99M85 Gm9369-201ENSMUST00000196009 733 ntBASIC9.7□□□□□ -0.86
Scrt1Q99M85 Gm44323-201ENSMUST00000198689 129 ntBASIC9.7□□□□□ -0.86
Scrt1Q99M85 Nme6-214ENSMUST00000200468 865 ntAPPRIS P1 TSL 2 BASIC9.7□□□□□ -0.86
Scrt1Q99M85 Olfr1380-201ENSMUST00000204300 938 ntAPPRIS P1 BASIC9.7□□□□□ -0.86
Scrt1Q99M85 Gm45094-201ENSMUST00000207013 617 ntBASIC9.7□□□□□ -0.86
Scrt1Q99M85 Nt5dc1-206ENSMUST00000213269 802 ntTSL 5 BASIC9.7□□□□□ -0.86
Scrt1Q99M85 Rps2-ps12-201ENSMUST00000214262 785 ntBASIC9.7□□□□□ -0.86
Scrt1Q99M85 Gm8255-201ENSMUST00000218693 305 ntBASIC9.7□□□□□ -0.86
Scrt1Q99M85 Gm46224-201ENSMUST00000220221 1242 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
Scrt1Q99M85 Gm40910-202ENSMUST00000223077 569 ntTSL 5 BASIC9.7□□□□□ -0.86
Scrt1Q99M85 Tnfrsf18-201ENSMUST00000040274 804 ntAPPRIS ALT2 TSL 1 (best) BASIC9.7□□□□□ -0.86
Scrt1Q99M85 Uqcc1-201ENSMUST00000006036 808 ntTSL 5 BASIC9.7□□□□□ -0.86
Scrt1Q99M85 Tcp10a-202ENSMUST00000128533 2589 ntAPPRIS P2 TSL 1 (best) BASIC9.7□□□□□ -0.86
Scrt1Q99M85 Os9-202ENSMUST00000164259 2627 ntAPPRIS ALT2 TSL 1 (best) BASIC9.7□□□□□ -0.86
Scrt1Q99M85 Il27ra-201ENSMUST00000005601 2664 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Scrt1Q99M85 Msh5-202ENSMUST00000097338 2678 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Scrt1Q99M85 Gm13347-201ENSMUST00000120298 1353 ntBASIC9.7□□□□□ -0.86
Scrt1Q99M85 Ttc14-201ENSMUST00000099153 9661 ntAPPRIS P3 TSL 1 (best) BASIC9.7□□□□□ -0.86
Scrt1Q99M85 Map4-205ENSMUST00000165876 5573 ntAPPRIS ALT2 TSL 5 BASIC9.7□□□□□ -0.86
Scrt1Q99M85 Abi1-208ENSMUST00000139038 2899 ntAPPRIS ALT1 TSL 5 BASIC9.7□□□□□ -0.86
Scrt1Q99M85 Etv1-205ENSMUST00000160856 1474 ntTSL 5 BASIC9.7□□□□□ -0.86
Scrt1Q99M85 Styk1-202ENSMUST00000121078 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC9.7□□□□□ -0.86
Scrt1Q99M85 Gm38089-201ENSMUST00000193585 1514 ntBASIC9.7□□□□□ -0.86
Scrt1Q99M85 Creb3l4-201ENSMUST00000029547 1553 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Scrt1Q99M85 Vmn1r193-202ENSMUST00000227457 6429 ntAPPRIS P1 BASIC9.7□□□□□ -0.86
Scrt1Q99M85 Als2cl-206ENSMUST00000155014 5150 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Scrt1Q99M85 Tfip11-201ENSMUST00000031288 3560 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Scrt1Q99M85 Kcnh3-201ENSMUST00000041415 3583 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Scrt1Q99M85 Dntt-201ENSMUST00000051806 2128 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
Scrt1Q99M85 Mphosph10-201ENSMUST00000032735 2248 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Scrt1Q99M85 Nras-201ENSMUST00000029445 4470 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Scrt1Q99M85 Eya2-201ENSMUST00000063433 2460 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Scrt1Q99M85 Slc36a1-203ENSMUST00000108872 5264 ntAPPRIS P1 TSL 5 BASIC9.69□□□□□ -0.86
Scrt1Q99M85 AC154171.2-201ENSMUST00000225219 2652 ntBASIC9.69□□□□□ -0.86
Scrt1Q99M85 BC067074-203ENSMUST00000136755 8274 ntAPPRIS P1 TSL 5 BASIC9.69□□□□□ -0.86
Scrt1Q99M85 Rufy2-204ENSMUST00000131718 2816 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
Scrt1Q99M85 Camk2g-203ENSMUST00000100837 3564 ntAPPRIS ALT1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Scrt1Q99M85 Fam163a-201ENSMUST00000015628 3882 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Scrt1Q99M85 Pcdhga3-201ENSMUST00000073447 4720 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Scrt1Q99M85 Mroh1-201ENSMUST00000092595 5111 ntAPPRIS ALT2 TSL 1 (best) BASIC9.69□□□□□ -0.86
Scrt1Q99M85 Phf21a-209ENSMUST00000111297 6188 ntAPPRIS ALT2 TSL 5 BASIC9.69□□□□□ -0.86
Scrt1Q99M85 Phf21a-201ENSMUST00000044036 6187 ntAPPRIS ALT2 TSL 5 BASIC9.69□□□□□ -0.86
Scrt1Q99M85 Mir744-201ENSMUST00000103261 100 ntBASIC9.69□□□□□ -0.86
Scrt1Q99M85 Gm4294-201ENSMUST00000105169 614 ntBASIC9.69□□□□□ -0.86
Scrt1Q99M85 Pex5l-203ENSMUST00000108221 1187 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
Scrt1Q99M85 H2afv-202ENSMUST00000109737 1633 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Scrt1Q99M85 Kpna7-202ENSMUST00000110673 2453 ntAPPRIS ALT2 TSL 5 BASIC9.69□□□□□ -0.86
Scrt1Q99M85 Tprkb-204ENSMUST00000113752 749 ntAPPRIS P1 TSL 5 BASIC9.69□□□□□ -0.86
Scrt1Q99M85 Trip4-202ENSMUST00000119245 4211 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Scrt1Q99M85 Gm14234-201ENSMUST00000119539 845 ntBASIC9.69□□□□□ -0.86
Scrt1Q99M85 Gm11993-201ENSMUST00000121861 820 ntBASIC9.69□□□□□ -0.86
Scrt1Q99M85 Tspan32os-201ENSMUST00000131740 975 ntTSL 2 BASIC9.69□□□□□ -0.86
Scrt1Q99M85 BC004004-203ENSMUST00000149405 1402 ntAPPRIS P1 TSL 5 BASIC9.69□□□□□ -0.86
Scrt1Q99M85 Fxyd5-212ENSMUST00000162733 2998 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
Scrt1Q99M85 Fam166b-206ENSMUST00000171134 1198 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
Scrt1Q99M85 Tmem134-216ENSMUST00000171743 3701 ntTSL 5 BASIC9.69□□□□□ -0.86
Scrt1Q99M85 4931440J10Rik-201ENSMUST00000181344 891 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
Scrt1Q99M85 Mir6953-201ENSMUST00000184745 68 ntBASIC9.69□□□□□ -0.86
Scrt1Q99M85 Kcnk2-206ENSMUST00000193319 1548 ntAPPRIS P4 TSL 1 (best) BASIC9.69□□□□□ -0.86
Scrt1Q99M85 P4htm-204ENSMUST00000193621 1297 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
Scrt1Q99M85 Gm37969-201ENSMUST00000195777 3409 ntBASIC9.69□□□□□ -0.86
Scrt1Q99M85 Gm7538-201ENSMUST00000200918 1348 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
Scrt1Q99M85 Gm7238-201ENSMUST00000206467 973 ntBASIC9.69□□□□□ -0.86
Scrt1Q99M85 Gm45012-201ENSMUST00000208323 1666 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
Scrt1Q99M85 Gm7904-201ENSMUST00000217049 465 ntBASIC9.69□□□□□ -0.86
Scrt1Q99M85 Ly86-201ENSMUST00000021860 1134 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Scrt1Q99M85 CT010480.4-201ENSMUST00000224654 2283 ntBASIC9.69□□□□□ -0.86
Scrt1Q99M85 Cma1-202ENSMUST00000226280 1090 ntAPPRIS ALT2 BASIC9.69□□□□□ -0.86
Scrt1Q99M85 Cma1-201ENSMUST00000022834 1074 ntAPPRIS P2 TSL 1 (best) BASIC9.69□□□□□ -0.86
Scrt1Q99M85 Grhl2-201ENSMUST00000022895 4947 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Scrt1Q99M85 Slc9a1-201ENSMUST00000030669 4676 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Scrt1Q99M85 Slc10a7-201ENSMUST00000034111 3595 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Scrt1Q99M85 Qsox1-201ENSMUST00000035325 3348 ntAPPRIS P3 TSL 1 (best) BASIC9.69□□□□□ -0.86
Scrt1Q99M85 Akr1b8-201ENSMUST00000038406 1358 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Scrt1Q99M85 Myo15b-201ENSMUST00000040703 2825 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
Scrt1Q99M85 Nnt-201ENSMUST00000069902 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC9.69□□□□□ -0.86
Scrt1Q99M85 Prok2-201ENSMUST00000008273 594 ntTSL 3 BASIC9.69□□□□□ -0.86
Retrieved 100 of 76,532 protein–RNA pairs in 67.4 ms