Protein–RNA interactions for Protein: Q99LF4

Rtcb, tRNA-splicing ligase RtcB homolog, mousemouse

Known RBP Predictions only

Length 505 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RtcbQ99LF4 Rasgrp1-204ENSMUST00000173252 1750 ntTSL 5 BASIC13.59□□□□□ -0.23
RtcbQ99LF4 Cdc37-201ENSMUST00000019615 7851 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
RtcbQ99LF4 Igll1-201ENSMUST00000100136 870 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
RtcbQ99LF4 1700071K01Rik-201ENSMUST00000117522 819 ntBASIC13.59□□□□□ -0.23
RtcbQ99LF4 Gm12688-201ENSMUST00000136525 701 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
RtcbQ99LF4 Atp5e-201ENSMUST00000016396 421 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
RtcbQ99LF4 Gm9574-201ENSMUST00000173127 845 ntBASIC13.59□□□□□ -0.23
RtcbQ99LF4 Gm6677-201ENSMUST00000195100 441 ntBASIC13.59□□□□□ -0.23
RtcbQ99LF4 Gm36307-201ENSMUST00000195831 953 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
RtcbQ99LF4 Ighv1-86-201ENSMUST00000200562 353 ntBASIC13.59□□□□□ -0.23
RtcbQ99LF4 Gm43172-201ENSMUST00000202139 2137 ntBASIC13.59□□□□□ -0.23
RtcbQ99LF4 Kcne3-206ENSMUST00000207995 439 ntAPPRIS P1 TSL 2 BASIC13.59□□□□□ -0.23
RtcbQ99LF4 Gm45875-201ENSMUST00000212178 781 ntTSL 3 BASIC13.59□□□□□ -0.23
RtcbQ99LF4 AC132384.2-201ENSMUST00000218018 526 ntBASIC13.59□□□□□ -0.23
RtcbQ99LF4 AC124503.1-201ENSMUST00000218524 526 ntTSL 3 BASIC13.59□□□□□ -0.23
RtcbQ99LF4 Gm5040-201ENSMUST00000218609 800 ntBASIC13.59□□□□□ -0.23
RtcbQ99LF4 2010109A12Rik-201ENSMUST00000031330 549 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
RtcbQ99LF4 Sh3tc2-201ENSMUST00000051720 4536 ntAPPRIS P1 TSL 2 BASIC13.59□□□□□ -0.23
RtcbQ99LF4 Faap100-201ENSMUST00000026448 3193 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
RtcbQ99LF4 Gm31938-201ENSMUST00000218081 1818 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
RtcbQ99LF4 Rasgrp4-214ENSMUST00000205027 2717 ntTSL 5 BASIC13.59□□□□□ -0.23
RtcbQ99LF4 Egfl6-201ENSMUST00000000412 2704 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
RtcbQ99LF4 Gm44241-201ENSMUST00000203230 1662 ntBASIC13.59□□□□□ -0.23
RtcbQ99LF4 Gm8968-201ENSMUST00000199133 1303 ntBASIC13.59□□□□□ -0.23
RtcbQ99LF4 3110062M04Rik-201ENSMUST00000055097 3681 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
RtcbQ99LF4 AU022754-201ENSMUST00000180441 2976 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
RtcbQ99LF4 Gm42971-201ENSMUST00000199228 2079 ntBASIC13.59□□□□□ -0.23
RtcbQ99LF4 Ppnr-201ENSMUST00000190974 3525 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
RtcbQ99LF4 Ajuba-201ENSMUST00000054487 3397 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
RtcbQ99LF4 Gm26818-201ENSMUST00000181367 1360 ntTSL 1 (best) BASIC13.58□□□□□ -0.23
RtcbQ99LF4 AC156631.1-201ENSMUST00000215213 1358 ntTSL 5 BASIC13.58□□□□□ -0.23
RtcbQ99LF4 Zbtb6-202ENSMUST00000112932 5077 ntAPPRIS P1 TSL 2 BASIC13.58□□□□□ -0.23
RtcbQ99LF4 Fcgr2b-204ENSMUST00000159969 1578 ntAPPRIS P4 TSL 1 (best) BASIC13.58□□□□□ -0.23
RtcbQ99LF4 2310043M15Rik-201ENSMUST00000180967 1580 ntTSL 1 (best) BASIC13.58□□□□□ -0.23
RtcbQ99LF4 Gm37744-201ENSMUST00000194616 1590 ntBASIC13.58□□□□□ -0.23
RtcbQ99LF4 Lcmt2-202ENSMUST00000110674 3056 ntAPPRIS P1 BASIC13.58□□□□□ -0.23
RtcbQ99LF4 Prr12-201ENSMUST00000057293 7023 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.24
RtcbQ99LF4 Hgs-201ENSMUST00000026900 2908 ntAPPRIS P2 TSL 1 (best) BASIC13.58□□□□□ -0.24
RtcbQ99LF4 Rab3d-203ENSMUST00000122211 3886 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
RtcbQ99LF4 Adck1-201ENSMUST00000101165 2158 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
RtcbQ99LF4 Ilvbl-212ENSMUST00000220430 2350 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
RtcbQ99LF4 Bpnt1-201ENSMUST00000027916 2200 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
RtcbQ99LF4 Gabrg3-202ENSMUST00000068911 9767 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
RtcbQ99LF4 Zfp773-201ENSMUST00000032622 3028 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
RtcbQ99LF4 Gm5148-203ENSMUST00000108105 1282 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
RtcbQ99LF4 Zfand1-202ENSMUST00000108377 936 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
RtcbQ99LF4 1700064H15Rik-201ENSMUST00000119133 394 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
RtcbQ99LF4 Gm14148-201ENSMUST00000122433 1008 ntBASIC13.58□□□□□ -0.24
RtcbQ99LF4 Gm14717-201ENSMUST00000140450 649 ntTSL 3 BASIC13.58□□□□□ -0.24
RtcbQ99LF4 Gm22388-201ENSMUST00000158194 248 ntBASIC13.58□□□□□ -0.24
RtcbQ99LF4 Gm5873-201ENSMUST00000177157 1066 ntBASIC13.58□□□□□ -0.24
RtcbQ99LF4 Gm8707-201ENSMUST00000183325 980 ntBASIC13.58□□□□□ -0.24
RtcbQ99LF4 Kif4-ps-202ENSMUST00000185083 652 ntBASIC13.58□□□□□ -0.24
RtcbQ99LF4 Gm29595-202ENSMUST00000187954 466 ntTSL 3 BASIC13.58□□□□□ -0.24
RtcbQ99LF4 4930573C15Rik-201ENSMUST00000197707 777 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
RtcbQ99LF4 Gm43997-201ENSMUST00000203986 1005 ntBASIC13.58□□□□□ -0.24
RtcbQ99LF4 Saa-ps-201ENSMUST00000211148 320 ntBASIC13.58□□□□□ -0.24
RtcbQ99LF4 Prrg2-211ENSMUST00000211337 676 ntTSL 3 BASIC13.58□□□□□ -0.24
RtcbQ99LF4 AC154806.7-201ENSMUST00000227998 202 ntBASIC13.58□□□□□ -0.24
RtcbQ99LF4 Cxcl10-201ENSMUST00000038816 1094 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
RtcbQ99LF4 Vps25-201ENSMUST00000007533 615 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
RtcbQ99LF4 Iah1-201ENSMUST00000076813 1141 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
RtcbQ99LF4 Gm9701-201ENSMUST00000077976 427 ntBASIC13.58□□□□□ -0.24
RtcbQ99LF4 Ppara-201ENSMUST00000057979 2063 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
RtcbQ99LF4 Vcpip1-201ENSMUST00000057438 9749 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
RtcbQ99LF4 Pcdhgc4-201ENSMUST00000066140 5024 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
RtcbQ99LF4 Dock11-201ENSMUST00000033419 6665 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
RtcbQ99LF4 Slc39a9-204ENSMUST00000217889 2155 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
RtcbQ99LF4 Atp6v0e2-201ENSMUST00000040361 1789 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
RtcbQ99LF4 Akr1d1-201ENSMUST00000040987 2699 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
RtcbQ99LF4 F730043M19Rik-204ENSMUST00000148740 3312 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
RtcbQ99LF4 Spock1-202ENSMUST00000185502 4614 ntAPPRIS ALT1 TSL 5 BASIC13.57□□□□□ -0.24
RtcbQ99LF4 Phf21a-206ENSMUST00000111292 2461 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
RtcbQ99LF4 Sectm1b-201ENSMUST00000039309 2287 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
RtcbQ99LF4 Xndc1-201ENSMUST00000094130 2298 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
RtcbQ99LF4 Xylb-201ENSMUST00000039610 3383 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
RtcbQ99LF4 Lck-208ENSMUST00000167288 2074 ntTSL 5 BASIC13.57□□□□□ -0.24
RtcbQ99LF4 Rtn4-203ENSMUST00000102841 4060 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
RtcbQ99LF4 Atxn7l1-203ENSMUST00000110824 1675 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
RtcbQ99LF4 Gm10537-201ENSMUST00000192625 1698 ntBASIC13.57□□□□□ -0.24
RtcbQ99LF4 Slc25a25-202ENSMUST00000052119 3529 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
RtcbQ99LF4 Zmat1-201ENSMUST00000064659 3501 ntAPPRIS P2 TSL 1 (best) BASIC13.57□□□□□ -0.24
RtcbQ99LF4 Hemk1-201ENSMUST00000035196 2192 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
RtcbQ99LF4 Ackr2-201ENSMUST00000050327 2853 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
RtcbQ99LF4 C1qtnf6-201ENSMUST00000023075 2402 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
RtcbQ99LF4 Tnnt3-213ENSMUST00000105952 1040 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
RtcbQ99LF4 Tnnt3-215ENSMUST00000105954 1052 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
RtcbQ99LF4 Tnnt3-216ENSMUST00000105955 1028 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
RtcbQ99LF4 Tnnt3-218ENSMUST00000105958 1050 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
RtcbQ99LF4 Gm14639-201ENSMUST00000120850 866 ntBASIC13.57□□□□□ -0.24
RtcbQ99LF4 1700095J12Rik-201ENSMUST00000124620 737 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
RtcbQ99LF4 Tnnt3-225ENSMUST00000179658 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
RtcbQ99LF4 Sult2b1-207ENSMUST00000210754 1242 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
RtcbQ99LF4 AC163638.2-201ENSMUST00000224920 827 ntBASIC13.57□□□□□ -0.24
RtcbQ99LF4 CT025679.1-201ENSMUST00000227106 449 ntBASIC13.57□□□□□ -0.24
RtcbQ99LF4 Ankrd45-201ENSMUST00000052245 849 ntAPPRIS P2 TSL 5 BASIC13.57□□□□□ -0.24
RtcbQ99LF4 Tnnt3-202ENSMUST00000078497 1067 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
RtcbQ99LF4 Atf7-201ENSMUST00000096143 390 ntBASIC13.57□□□□□ -0.24
RtcbQ99LF4 Fndc3b-201ENSMUST00000046157 6875 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
RtcbQ99LF4 Gm13093-201ENSMUST00000126212 2485 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Retrieved 100 of 76,532 protein–RNA pairs in 49.6 ms