Protein–RNA interactions for Protein: Q91XY4

Pcdhga4, Protocadherin gamma-A4, mousemouse

Predictions only

Length 930 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga4Q91XY4 Smim1-206ENSMUST00000132541 490 ntAPPRIS P1 TSL 3 BASIC10.9□□□□□ -0.66
Pcdhga4Q91XY4 Bach2it1-201ENSMUST00000133451 481 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Pcdhga4Q91XY4 Gm15412-201ENSMUST00000137193 1096 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Pcdhga4Q91XY4 Nr5a1os-201ENSMUST00000146954 926 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Pcdhga4Q91XY4 Gm23694-201ENSMUST00000179335 110 ntBASIC10.9□□□□□ -0.66
Pcdhga4Q91XY4 Gm42867-201ENSMUST00000202995 469 ntBASIC10.9□□□□□ -0.66
Pcdhga4Q91XY4 Sdf2-201ENSMUST00000002133 1268 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Pcdhga4Q91XY4 Gm34973-201ENSMUST00000217087 572 ntTSL 3 BASIC10.9□□□□□ -0.66
Pcdhga4Q91XY4 Gm4065-202ENSMUST00000218911 986 ntTSL 3 BASIC10.9□□□□□ -0.66
Pcdhga4Q91XY4 Gm46336-201ENSMUST00000221894 279 ntTSL 5 BASIC10.9□□□□□ -0.66
Pcdhga4Q91XY4 Gm36423-202ENSMUST00000222215 1298 ntTSL 5 BASIC10.9□□□□□ -0.66
Pcdhga4Q91XY4 AC165154.1-201ENSMUST00000226661 340 ntBASIC10.9□□□□□ -0.66
Pcdhga4Q91XY4 Gm42602-201ENSMUST00000200288 3224 ntBASIC10.9□□□□□ -0.66
Pcdhga4Q91XY4 Tgfb1i1-201ENSMUST00000070656 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC10.9□□□□□ -0.66
Pcdhga4Q91XY4 Uspl1-201ENSMUST00000050472 3757 ntAPPRIS P4 TSL 1 (best) BASIC10.9□□□□□ -0.66
Pcdhga4Q91XY4 Prdm16-203ENSMUST00000097759 8544 ntAPPRIS ALT2 TSL 5 BASIC10.9□□□□□ -0.66
Pcdhga4Q91XY4 Tyw1-202ENSMUST00000044204 4698 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Pcdhga4Q91XY4 Atp9b-201ENSMUST00000091790 5357 ntAPPRIS ALT2 TSL 5 BASIC10.9□□□□□ -0.66
Pcdhga4Q91XY4 Swap70-201ENSMUST00000033325 4027 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.67
Pcdhga4Q91XY4 Ptpn23-201ENSMUST00000040021 5346 ntAPPRIS P1 TSL 5 BASIC10.9□□□□□ -0.67
Pcdhga4Q91XY4 Gm43999-201ENSMUST00000204286 2889 ntBASIC10.9□□□□□ -0.67
Pcdhga4Q91XY4 Tmem138-201ENSMUST00000025568 1590 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.67
Pcdhga4Q91XY4 Col11a1-201ENSMUST00000092155 7667 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.67
Pcdhga4Q91XY4 Rin1-208ENSMUST00000225427 4503 ntAPPRIS P2 BASIC10.9□□□□□ -0.67
Pcdhga4Q91XY4 Gal3st4-201ENSMUST00000100530 3162 ntAPPRIS P3 TSL 1 (best) BASIC10.89□□□□□ -0.67
Pcdhga4Q91XY4 Mid1-214ENSMUST00000163810 3689 ntAPPRIS P1 TSL 5 BASIC10.89□□□□□ -0.67
Pcdhga4Q91XY4 Ing1-204ENSMUST00000210041 1881 ntTSL 5 BASIC10.89□□□□□ -0.67
Pcdhga4Q91XY4 Atp6v1e1-201ENSMUST00000019354 1312 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Pcdhga4Q91XY4 Kif2c-202ENSMUST00000106436 2378 ntAPPRIS ALT2 TSL 5 BASIC10.89□□□□□ -0.67
Pcdhga4Q91XY4 Capn5-201ENSMUST00000040971 4498 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Pcdhga4Q91XY4 Tpp2-201ENSMUST00000087933 4649 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Pcdhga4Q91XY4 AU015791-201ENSMUST00000223443 1457 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Pcdhga4Q91XY4 Gnrhr-202ENSMUST00000094654 1475 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Pcdhga4Q91XY4 C730027H18Rik-201ENSMUST00000218381 2300 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Pcdhga4Q91XY4 Ctsb-201ENSMUST00000006235 4743 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Pcdhga4Q91XY4 Zfand2a-201ENSMUST00000079996 3169 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Pcdhga4Q91XY4 Gm4900-201ENSMUST00000222046 1628 ntBASIC10.89□□□□□ -0.67
Pcdhga4Q91XY4 Mybpc3-203ENSMUST00000169776 4163 ntAPPRIS P2 TSL 5 BASIC10.89□□□□□ -0.67
Pcdhga4Q91XY4 Ostm1-202ENSMUST00000105497 770 ntTSL 2 BASIC10.89□□□□□ -0.67
Pcdhga4Q91XY4 Ctrc-202ENSMUST00000105781 784 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Pcdhga4Q91XY4 Ankrd60-201ENSMUST00000109112 833 ntAPPRIS ALT2 TSL 3 BASIC10.89□□□□□ -0.67
Pcdhga4Q91XY4 Xlr4c-204ENSMUST00000114531 1104 ntAPPRIS P1 TSL 2 BASIC10.89□□□□□ -0.67
Pcdhga4Q91XY4 Snx29-202ENSMUST00000115814 1125 ntTSL 5 BASIC10.89□□□□□ -0.67
Pcdhga4Q91XY4 Eef1d-207ENSMUST00000116440 896 ntAPPRIS ALT2 TSL 3 BASIC10.89□□□□□ -0.67
Pcdhga4Q91XY4 Gm13422-201ENSMUST00000118834 504 ntBASIC10.89□□□□□ -0.67
Pcdhga4Q91XY4 Gm15856-201ENSMUST00000124853 1162 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Pcdhga4Q91XY4 Gm14154-201ENSMUST00000142642 579 ntTSL 3 BASIC10.89□□□□□ -0.67
Pcdhga4Q91XY4 Gm20420-201ENSMUST00000173178 639 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Pcdhga4Q91XY4 Ccser2-208ENSMUST00000183007 1293 ntTSL 5 BASIC10.89□□□□□ -0.67
Pcdhga4Q91XY4 Gm28215-201ENSMUST00000186146 346 ntTSL 5 BASIC10.89□□□□□ -0.67
Pcdhga4Q91XY4 Gm29560-201ENSMUST00000191526 881 ntTSL 5 BASIC10.89□□□□□ -0.67
Pcdhga4Q91XY4 Gm43552-201ENSMUST00000196121 365 ntAPPRIS P1 TSL 3 BASIC10.89□□□□□ -0.67
Pcdhga4Q91XY4 Ccdc12-201ENSMUST00000019803 834 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Pcdhga4Q91XY4 Gm17825-201ENSMUST00000206836 794 ntBASIC10.89□□□□□ -0.67
Pcdhga4Q91XY4 Gm7600-201ENSMUST00000209657 785 ntBASIC10.89□□□□□ -0.67
Pcdhga4Q91XY4 Gm31166-202ENSMUST00000210638 1268 ntTSL 3 BASIC10.89□□□□□ -0.67
Pcdhga4Q91XY4 Ccdc153-202ENSMUST00000213891 792 ntAPPRIS ALT2 TSL 3 BASIC10.89□□□□□ -0.67
Pcdhga4Q91XY4 Cbx3-ps8-201ENSMUST00000214564 548 ntBASIC10.89□□□□□ -0.67
Pcdhga4Q91XY4 AC122891.1-201ENSMUST00000218671 268 ntBASIC10.89□□□□□ -0.67
Pcdhga4Q91XY4 Cinp-204ENSMUST00000221102 536 ntTSL 2 BASIC10.89□□□□□ -0.67
Pcdhga4Q91XY4 AC127270.1-201ENSMUST00000221441 491 ntTSL 3 BASIC10.89□□□□□ -0.67
Pcdhga4Q91XY4 CT010506.1-201ENSMUST00000223673 349 ntBASIC10.89□□□□□ -0.67
Pcdhga4Q91XY4 CT009536.2-201ENSMUST00000225370 665 ntBASIC10.89□□□□□ -0.67
Pcdhga4Q91XY4 Cd7-201ENSMUST00000026159 982 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Pcdhga4Q91XY4 Bpifa1-201ENSMUST00000028985 1106 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Pcdhga4Q91XY4 Pgpep1l-201ENSMUST00000032770 953 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Pcdhga4Q91XY4 BC030499-201ENSMUST00000046361 959 ntAPPRIS P1 TSL 5 BASIC10.89□□□□□ -0.67
Pcdhga4Q91XY4 Nr5a2-205ENSMUST00000192929 1756 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Pcdhga4Q91XY4 Mcam-202ENSMUST00000098852 2772 ntAPPRIS ALT2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Pcdhga4Q91XY4 AC169511.2-201ENSMUST00000226674 2063 ntBASIC10.89□□□□□ -0.67
Pcdhga4Q91XY4 Snw1-201ENSMUST00000021428 2232 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Pcdhga4Q91XY4 Atl2-202ENSMUST00000112437 3371 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Pcdhga4Q91XY4 Gm5860-202ENSMUST00000151038 1711 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Pcdhga4Q91XY4 Aldh3a2-201ENSMUST00000066277 2892 ntTSL 2 BASIC10.89□□□□□ -0.67
Pcdhga4Q91XY4 Ddx52-201ENSMUST00000049257 3194 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Pcdhga4Q91XY4 Trmt12-201ENSMUST00000036937 4454 ntAPPRIS P1 BASIC10.89□□□□□ -0.67
Pcdhga4Q91XY4 Mcm3ap-201ENSMUST00000170795 6427 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Pcdhga4Q91XY4 Syt15-201ENSMUST00000035351 3623 ntAPPRIS P3 TSL 1 (best) BASIC10.89□□□□□ -0.67
Pcdhga4Q91XY4 Slc38a3-203ENSMUST00000177567 2456 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Pcdhga4Q91XY4 Slc38a3-209ENSMUST00000193932 2463 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Pcdhga4Q91XY4 Rbfox2-203ENSMUST00000166610 6573 ntAPPRIS P2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Pcdhga4Q91XY4 Dchs1-201ENSMUST00000078482 10754 ntAPPRIS P1 TSL 5 BASIC10.88□□□□□ -0.67
Pcdhga4Q91XY4 Gm40617-201ENSMUST00000218840 2420 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Pcdhga4Q91XY4 Dok4-204ENSMUST00000212810 2558 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Pcdhga4Q91XY4 Ccdc42os-201ENSMUST00000148019 1335 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Pcdhga4Q91XY4 Cipc-208ENSMUST00000189246 1454 ntAPPRIS P2 TSL 2 BASIC10.88□□□□□ -0.67
Pcdhga4Q91XY4 Dnmbp-206ENSMUST00000212592 3901 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Pcdhga4Q91XY4 Tas1r2-202ENSMUST00000166773 2524 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Pcdhga4Q91XY4 Mapkap1-209ENSMUST00000147337 3111 ntAPPRIS P2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Pcdhga4Q91XY4 Acin1-203ENSMUST00000111484 4048 ntAPPRIS ALT2 TSL 5 BASIC10.88□□□□□ -0.67
Pcdhga4Q91XY4 Phip-201ENSMUST00000034787 10756 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Pcdhga4Q91XY4 Gm10479-201ENSMUST00000101568 318 ntAPPRIS P1 TSL 5 BASIC10.88□□□□□ -0.67
Pcdhga4Q91XY4 A230006K03Rik-201ENSMUST00000107533 977 ntTSL 5 BASIC10.88□□□□□ -0.67
Pcdhga4Q91XY4 Vstm2a-202ENSMUST00000109647 1745 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Pcdhga4Q91XY4 Slc25a51-202ENSMUST00000116341 4438 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Pcdhga4Q91XY4 Plgrkt-209ENSMUST00000152936 604 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Pcdhga4Q91XY4 B230119M05Rik-201ENSMUST00000154072 979 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Pcdhga4Q91XY4 Tmem40-206ENSMUST00000170625 843 ntAPPRIS ALT2 TSL 3 BASIC10.88□□□□□ -0.67
Pcdhga4Q91XY4 Gm17709-201ENSMUST00000174536 1096 ntBASIC10.88□□□□□ -0.67
Pcdhga4Q91XY4 Higd1c-201ENSMUST00000175683 507 ntAPPRIS P1 TSL 3 BASIC10.88□□□□□ -0.67
Retrieved 100 of 76,532 protein–RNA pairs in 52.2 ms