Protein–RNA interactions for Protein: Q8K445

Clrn1, Clarin-1, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clrn1Q8K445 Hacl1-212ENSMUST00000167066 1566 ntTSL 5 BASIC10.37□□□□□ -0.75
Clrn1Q8K445 1110036E04Rik-201ENSMUST00000181151 777 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Clrn1Q8K445 Gm19015-201ENSMUST00000184002 1189 ntBASIC10.37□□□□□ -0.75
Clrn1Q8K445 Gm27232-201ENSMUST00000184373 597 ntTSL 3 BASIC10.37□□□□□ -0.75
Clrn1Q8K445 Gm3508-201ENSMUST00000186012 792 ntBASIC10.37□□□□□ -0.75
Clrn1Q8K445 Chn2-210ENSMUST00000203091 755 ntTSL 5 BASIC10.37□□□□□ -0.75
Clrn1Q8K445 Gm2511-202ENSMUST00000206158 455 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Clrn1Q8K445 Gm15802-202ENSMUST00000209595 1094 ntTSL 5 BASIC10.37□□□□□ -0.75
Clrn1Q8K445 AC125374.1-201ENSMUST00000213573 1400 ntBASIC10.37□□□□□ -0.75
Clrn1Q8K445 AC154826.1-201ENSMUST00000217369 498 ntTSL 5 BASIC10.37□□□□□ -0.75
Clrn1Q8K445 Atg10-201ENSMUST00000022119 1583 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Clrn1Q8K445 CT009527.1-201ENSMUST00000224205 339 ntBASIC10.37□□□□□ -0.75
Clrn1Q8K445 Thoc7-209ENSMUST00000225325 765 ntBASIC10.37□□□□□ -0.75
Clrn1Q8K445 AC159103.1-201ENSMUST00000228325 429 ntBASIC10.37□□□□□ -0.75
Clrn1Q8K445 Fth1-201ENSMUST00000025563 866 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Clrn1Q8K445 Fkbpl-201ENSMUST00000036720 1270 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Clrn1Q8K445 Saxo2-201ENSMUST00000056728 2783 ntAPPRIS P2 TSL 1 (best) BASIC10.37□□□□□ -0.75
Clrn1Q8K445 Olfr284-201ENSMUST00000063289 918 ntAPPRIS P1 BASIC10.37□□□□□ -0.75
Clrn1Q8K445 Naa10-202ENSMUST00000096316 892 ntAPPRIS ALT2 TSL 2 BASIC10.37□□□□□ -0.75
Clrn1Q8K445 Cep350-204ENSMUST00000138762 13307 ntAPPRIS P1 TSL 5 BASIC10.37□□□□□ -0.75
Clrn1Q8K445 Slc38a5-202ENSMUST00000115590 1983 ntAPPRIS ALT2 TSL 2 BASIC10.37□□□□□ -0.75
Clrn1Q8K445 Adcy7-202ENSMUST00000168545 5937 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Clrn1Q8K445 Gm14005-209ENSMUST00000224993 1832 ntBASIC10.37□□□□□ -0.75
Clrn1Q8K445 Gypa-201ENSMUST00000063359 1848 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Clrn1Q8K445 Ribc2-201ENSMUST00000023067 1652 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Clrn1Q8K445 Plpbp-205ENSMUST00000209856 3954 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Clrn1Q8K445 Exoc4-203ENSMUST00000115080 2369 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Clrn1Q8K445 Nanog-201ENSMUST00000012540 2211 ntAPPRIS P3 TSL 1 (best) BASIC10.37□□□□□ -0.75
Clrn1Q8K445 Pigc-205ENSMUST00000193784 4207 ntAPPRIS P1 BASIC10.37□□□□□ -0.75
Clrn1Q8K445 Ufd1-202ENSMUST00000115578 2078 ntAPPRIS P1 TSL 5 BASIC10.37□□□□□ -0.75
Clrn1Q8K445 Asb15-201ENSMUST00000031696 2088 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Clrn1Q8K445 Nr5a1-201ENSMUST00000028084 2947 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Clrn1Q8K445 Syt14-201ENSMUST00000016344 1904 ntAPPRIS ALT2 TSL 1 (best) BASIC10.37□□□□□ -0.75
Clrn1Q8K445 Gm45187-201ENSMUST00000207697 2760 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Clrn1Q8K445 Sez6l-205ENSMUST00000212480 5857 ntAPPRIS ALT2 TSL 5 BASIC10.36□□□□□ -0.75
Clrn1Q8K445 A230077H06Rik-202ENSMUST00000189574 2477 ntTSL 2 BASIC10.36□□□□□ -0.75
Clrn1Q8K445 Dlec1-208ENSMUST00000165231 5263 ntAPPRIS P2 TSL 5 BASIC10.36□□□□□ -0.75
Clrn1Q8K445 Fopnl-201ENSMUST00000023357 1465 ntAPPRIS P2 TSL 1 (best) BASIC10.36□□□□□ -0.75
Clrn1Q8K445 Shank2-201ENSMUST00000097929 4418 ntTSL 5 BASIC10.36□□□□□ -0.75
Clrn1Q8K445 1500002C15Rik-201ENSMUST00000178987 2183 ntBASIC10.36□□□□□ -0.75
Clrn1Q8K445 Il17rd-201ENSMUST00000035336 8280 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Clrn1Q8K445 Zc3hc1-202ENSMUST00000102992 1865 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Clrn1Q8K445 Slc17a5-202ENSMUST00000117645 3114 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Clrn1Q8K445 Unkl-202ENSMUST00000039734 4779 ntAPPRIS P1 TSL 5 BASIC10.36□□□□□ -0.75
Clrn1Q8K445 Gm5739-201ENSMUST00000208601 1703 ntBASIC10.36□□□□□ -0.75
Clrn1Q8K445 D630003M21Rik-201ENSMUST00000046944 3910 ntAPPRIS P3 TSL 1 (best) BASIC10.36□□□□□ -0.75
Clrn1Q8K445 Camta2-201ENSMUST00000036299 4495 ntAPPRIS P3 TSL 1 (best) BASIC10.36□□□□□ -0.75
Clrn1Q8K445 Nav2-204ENSMUST00000183659 7765 ntAPPRIS ALT2 TSL 5 BASIC10.36□□□□□ -0.75
Clrn1Q8K445 Pck1-201ENSMUST00000029017 2661 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Clrn1Q8K445 Gm6024-201ENSMUST00000117850 1558 ntBASIC10.36□□□□□ -0.75
Clrn1Q8K445 Gm29684-201ENSMUST00000220248 1982 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Clrn1Q8K445 Arap1-201ENSMUST00000084895 4404 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Clrn1Q8K445 Gm3765-201ENSMUST00000130985 1447 ntBASIC10.36□□□□□ -0.75
Clrn1Q8K445 Map4-203ENSMUST00000163979 3320 ntAPPRIS ALT2 TSL 1 (best) BASIC10.36□□□□□ -0.75
Clrn1Q8K445 Oprm1-203ENSMUST00000056385 1440 ntAPPRIS P2 TSL 1 (best) BASIC10.36□□□□□ -0.75
Clrn1Q8K445 Smco1-201ENSMUST00000093183 1408 ntAPPRIS P1 TSL 5 BASIC10.36□□□□□ -0.75
Clrn1Q8K445 Flad1-202ENSMUST00000107426 2238 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Clrn1Q8K445 Gm3764-205ENSMUST00000181134 2203 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Clrn1Q8K445 9530059O14Rik-201ENSMUST00000181107 3978 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Clrn1Q8K445 4833420G17Rik-204ENSMUST00000225186 2627 ntAPPRIS P1 BASIC10.36□□□□□ -0.75
Clrn1Q8K445 Gm26013-201ENSMUST00000104404 119 ntBASIC10.36□□□□□ -0.75
Clrn1Q8K445 Gm14892-201ENSMUST00000117636 267 ntBASIC10.36□□□□□ -0.75
Clrn1Q8K445 Gm11451-201ENSMUST00000118946 630 ntBASIC10.36□□□□□ -0.75
Clrn1Q8K445 Gm12516-201ENSMUST00000120819 385 ntBASIC10.36□□□□□ -0.75
Clrn1Q8K445 n-R5s84-201ENSMUST00000122591 109 ntBASIC10.36□□□□□ -0.75
Clrn1Q8K445 Uba52-ps-201ENSMUST00000183770 379 ntBASIC10.36□□□□□ -0.75
Clrn1Q8K445 Eef1b2-209ENSMUST00000188524 681 ntTSL 3 BASIC10.36□□□□□ -0.75
Clrn1Q8K445 1700109G14Rik-202ENSMUST00000188538 754 ntTSL 3 BASIC10.36□□□□□ -0.75
Clrn1Q8K445 Gm29040-201ENSMUST00000189899 1188 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Clrn1Q8K445 Gm8197-202ENSMUST00000193422 934 ntBASIC10.36□□□□□ -0.75
Clrn1Q8K445 Gm43695-201ENSMUST00000196545 196 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Clrn1Q8K445 4930447N08Rik-203ENSMUST00000198879 1157 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Clrn1Q8K445 Gm42657-201ENSMUST00000201746 211 ntBASIC10.36□□□□□ -0.75
Clrn1Q8K445 Fxyd4-202ENSMUST00000203066 522 ntTSL 3 BASIC10.36□□□□□ -0.75
Clrn1Q8K445 Gm10109-202ENSMUST00000206890 1211 ntBASIC10.36□□□□□ -0.75
Clrn1Q8K445 AC154589.2-201ENSMUST00000228847 251 ntBASIC10.36□□□□□ -0.75
Clrn1Q8K445 Olfr462-201ENSMUST00000049743 936 ntAPPRIS P1 BASIC10.36□□□□□ -0.75
Clrn1Q8K445 Scn9a-201ENSMUST00000100063 9813 ntAPPRIS ALT2 TSL 5 BASIC10.36□□□□□ -0.75
Clrn1Q8K445 Scn9a-202ENSMUST00000100064 9840 ntAPPRIS P2 TSL 1 (best) BASIC10.36□□□□□ -0.75
Clrn1Q8K445 Pnma2-201ENSMUST00000089236 5518 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Clrn1Q8K445 Ppp1r18-201ENSMUST00000113814 3131 ntAPPRIS P2 TSL 1 (best) BASIC10.36□□□□□ -0.75
Clrn1Q8K445 Phip-201ENSMUST00000034787 10756 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Clrn1Q8K445 Nono-201ENSMUST00000033673 2562 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Clrn1Q8K445 Arsa-202ENSMUST00000165199 3492 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Clrn1Q8K445 Pde4b-206ENSMUST00000106907 1374 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Clrn1Q8K445 Mamdc2-201ENSMUST00000036069 3338 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Clrn1Q8K445 Arhgef2-231ENSMUST00000177498 3966 ntAPPRIS ALT2 TSL 1 (best) BASIC10.36□□□□□ -0.75
Clrn1Q8K445 Azin1-203ENSMUST00000110329 4217 ntAPPRIS P1 TSL 2 BASIC10.36□□□□□ -0.75
Clrn1Q8K445 Tkfc-201ENSMUST00000037678 2253 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Clrn1Q8K445 Slc38a3-202ENSMUST00000167868 3151 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Clrn1Q8K445 Cyb5r3-202ENSMUST00000162178 2547 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Clrn1Q8K445 Ccdc189-201ENSMUST00000072155 2536 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Clrn1Q8K445 Krt75-201ENSMUST00000042957 3266 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Clrn1Q8K445 Tax1bp1-201ENSMUST00000080723 3285 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Clrn1Q8K445 Uaca-201ENSMUST00000050183 4428 ntAPPRIS P2 TSL 1 (best) BASIC10.36□□□□□ -0.75
Clrn1Q8K445 Ptp4a3-203ENSMUST00000165541 3539 ntAPPRIS P1 TSL 5 BASIC10.36□□□□□ -0.75
Clrn1Q8K445 Dtx3l-202ENSMUST00000114885 2648 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Clrn1Q8K445 Npl-201ENSMUST00000041874 1735 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Clrn1Q8K445 C030034L19Rik-203ENSMUST00000181930 3133 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Clrn1Q8K445 Kif22-ps-201ENSMUST00000119302 1984 ntBASIC10.35□□□□□ -0.75
Retrieved 100 of 76,532 protein–RNA pairs in 43.3 ms