Protein–RNA interactions for Protein: Q8K2I2

Cchcr1, Coiled-coil alpha-helical rod protein 1, mousemouse

Predictions only

Length 770 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cchcr1Q8K2I2 Abcg2-202ENSMUST00000114294 2178 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
Cchcr1Q8K2I2 Gm23061-201ENSMUST00000102348 116 ntBASIC12.99□□□□□ -0.33
Cchcr1Q8K2I2 Cstad-201ENSMUST00000102853 819 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Cchcr1Q8K2I2 Lamr1-ps1-201ENSMUST00000119759 874 ntBASIC12.99□□□□□ -0.33
Cchcr1Q8K2I2 Gm12570-201ENSMUST00000122047 1030 ntBASIC12.99□□□□□ -0.33
Cchcr1Q8K2I2 Tctex1d1-205ENSMUST00000140654 891 ntAPPRIS ALT2 TSL 2 BASIC12.99□□□□□ -0.33
Cchcr1Q8K2I2 Prss36-208ENSMUST00000156152 1132 ntTSL 5 BASIC12.99□□□□□ -0.33
Cchcr1Q8K2I2 Hmgn3-201ENSMUST00000161796 862 ntAPPRIS ALT1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Cchcr1Q8K2I2 Gm17709-201ENSMUST00000174536 1096 ntBASIC12.99□□□□□ -0.33
Cchcr1Q8K2I2 Mir8115-201ENSMUST00000184992 119 ntBASIC12.99□□□□□ -0.33
Cchcr1Q8K2I2 Gm3551-201ENSMUST00000190750 664 ntBASIC12.99□□□□□ -0.33
Cchcr1Q8K2I2 Gm37905-201ENSMUST00000195310 341 ntBASIC12.99□□□□□ -0.33
Cchcr1Q8K2I2 Qdpr-209ENSMUST00000198258 1172 ntTSL 5 BASIC12.99□□□□□ -0.33
Cchcr1Q8K2I2 Mrnip-201ENSMUST00000020647 1142 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Cchcr1Q8K2I2 Colec11-203ENSMUST00000220836 887 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Cchcr1Q8K2I2 CT010465.1-201ENSMUST00000222463 809 ntTSL 5 BASIC12.99□□□□□ -0.33
Cchcr1Q8K2I2 Odf3-201ENSMUST00000026555 1128 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Cchcr1Q8K2I2 Il1f10-201ENSMUST00000058056 538 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Cchcr1Q8K2I2 Krtap5-1-201ENSMUST00000084413 588 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
Cchcr1Q8K2I2 Olfr1250-201ENSMUST00000099768 1139 ntAPPRIS P1 BASIC12.99□□□□□ -0.33
Cchcr1Q8K2I2 Fdft1-201ENSMUST00000054963 2860 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Cchcr1Q8K2I2 Ift88os-201ENSMUST00000149702 2016 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Cchcr1Q8K2I2 Cyp2b10-202ENSMUST00000072438 1916 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Cchcr1Q8K2I2 Gm26672-201ENSMUST00000180922 2685 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Cchcr1Q8K2I2 Grik4-201ENSMUST00000034515 3413 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
Cchcr1Q8K2I2 Clip1-204ENSMUST00000111564 5609 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Cchcr1Q8K2I2 Kyat1-201ENSMUST00000044038 1876 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Cchcr1Q8K2I2 Cdca2-207ENSMUST00000163100 3841 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
Cchcr1Q8K2I2 Mageb4-201ENSMUST00000096378 2401 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Cchcr1Q8K2I2 Dip2a-205ENSMUST00000160048 6551 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
Cchcr1Q8K2I2 Pnpla6-201ENSMUST00000004681 4438 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Cchcr1Q8K2I2 Gdf2-201ENSMUST00000100720 2988 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Cchcr1Q8K2I2 Anxa9-204ENSMUST00000164406 1611 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Cchcr1Q8K2I2 Mmp19-203ENSMUST00000219404 2236 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Cchcr1Q8K2I2 Syncrip-208ENSMUST00000174282 3404 ntAPPRIS ALT1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Cchcr1Q8K2I2 St5-201ENSMUST00000077909 4612 ntAPPRIS P4 TSL 1 (best) BASIC12.98□□□□□ -0.33
Cchcr1Q8K2I2 D630029K05Rik-201ENSMUST00000033651 2133 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Cchcr1Q8K2I2 Brd4-202ENSMUST00000114475 2731 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Cchcr1Q8K2I2 Smok3a-201ENSMUST00000085886 2723 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Cchcr1Q8K2I2 Chic1-201ENSMUST00000116547 7375 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Cchcr1Q8K2I2 Cap1-201ENSMUST00000069533 2620 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Cchcr1Q8K2I2 Atcayos-203ENSMUST00000150782 3057 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Cchcr1Q8K2I2 Mknk2-201ENSMUST00000003433 3065 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Cchcr1Q8K2I2 Cd6-203ENSMUST00000080292 3032 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
Cchcr1Q8K2I2 Spata33-207ENSMUST00000212760 4074 ntBASIC12.98□□□□□ -0.33
Cchcr1Q8K2I2 Gfra2-203ENSMUST00000227697 1323 ntBASIC12.98□□□□□ -0.33
Cchcr1Q8K2I2 Tyro3-202ENSMUST00000110783 4460 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Cchcr1Q8K2I2 Dnmbp-206ENSMUST00000212592 3901 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Cchcr1Q8K2I2 Wsb2-ps-201ENSMUST00000117937 1217 ntBASIC12.98□□□□□ -0.33
Cchcr1Q8K2I2 Gm6335-201ENSMUST00000118081 1194 ntBASIC12.98□□□□□ -0.33
Cchcr1Q8K2I2 Gm14314-201ENSMUST00000118225 1015 ntBASIC12.98□□□□□ -0.33
Cchcr1Q8K2I2 Gm7816-201ENSMUST00000119884 1194 ntBASIC12.98□□□□□ -0.33
Cchcr1Q8K2I2 Sec11a-204ENSMUST00000120285 875 ntTSL 3 BASIC12.98□□□□□ -0.33
Cchcr1Q8K2I2 Gm15542-201ENSMUST00000121585 1194 ntBASIC12.98□□□□□ -0.33
Cchcr1Q8K2I2 Nhp2-202ENSMUST00000127405 1042 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Cchcr1Q8K2I2 Vmn2r-ps54-203ENSMUST00000150856 1142 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Cchcr1Q8K2I2 Tbc1d22bos-201ENSMUST00000159875 826 ntTSL 3 BASIC12.98□□□□□ -0.33
Cchcr1Q8K2I2 Gm37826-201ENSMUST00000195329 322 ntBASIC12.98□□□□□ -0.33
Cchcr1Q8K2I2 Nutf2-202ENSMUST00000212042 645 ntAPPRIS P1 TSL 3 BASIC12.98□□□□□ -0.33
Cchcr1Q8K2I2 1700027J07Rik-202ENSMUST00000215747 1060 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Cchcr1Q8K2I2 AC154589.2-201ENSMUST00000228847 251 ntBASIC12.98□□□□□ -0.33
Cchcr1Q8K2I2 Olfr959-201ENSMUST00000079178 1055 ntAPPRIS P1 BASIC12.98□□□□□ -0.33
Cchcr1Q8K2I2 Mok-203ENSMUST00000084974 1132 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Cchcr1Q8K2I2 Tnni3-201ENSMUST00000098859 912 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Cchcr1Q8K2I2 Wwp2-204ENSMUST00000212205 2758 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Cchcr1Q8K2I2 Mkx-201ENSMUST00000079788 3202 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Cchcr1Q8K2I2 Cish-204ENSMUST00000168260 2742 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Cchcr1Q8K2I2 Vezt-202ENSMUST00000118077 2223 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Cchcr1Q8K2I2 E330034L11Rik-201ENSMUST00000200640 1742 ntBASIC12.98□□□□□ -0.33
Cchcr1Q8K2I2 Slitrk4-202ENSMUST00000114679 3513 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Cchcr1Q8K2I2 Rps24-210ENSMUST00000225023 1613 ntAPPRIS P4 BASIC12.98□□□□□ -0.33
Cchcr1Q8K2I2 Knop1-202ENSMUST00000063607 4884 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Cchcr1Q8K2I2 Pfkfb3-202ENSMUST00000049849 2076 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Cchcr1Q8K2I2 Lrtm2-204ENSMUST00000168793 3407 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
Cchcr1Q8K2I2 Rin2-201ENSMUST00000094480 4657 ntAPPRIS P2 TSL 5 BASIC12.98□□□□□ -0.33
Cchcr1Q8K2I2 Gm40617-201ENSMUST00000218840 2420 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Cchcr1Q8K2I2 Odf2-208ENSMUST00000113763 2364 ntAPPRIS P3 TSL 5 BASIC12.98□□□□□ -0.33
Cchcr1Q8K2I2 Spdye4a-203ENSMUST00000195900 1496 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
Cchcr1Q8K2I2 Prg4-201ENSMUST00000006171 1869 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Cchcr1Q8K2I2 Tsc2-201ENSMUST00000097373 6018 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Cchcr1Q8K2I2 Plekhm1-201ENSMUST00000041272 5968 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Cchcr1Q8K2I2 Kif19a-201ENSMUST00000084368 3433 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Cchcr1Q8K2I2 Gm16677-201ENSMUST00000181229 2174 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Cchcr1Q8K2I2 Gm27174-201ENSMUST00000184493 2174 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Cchcr1Q8K2I2 Gmps-201ENSMUST00000029405 8105 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Cchcr1Q8K2I2 Tmem254b-202ENSMUST00000100806 1108 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Cchcr1Q8K2I2 Tmem254a-201ENSMUST00000100811 1108 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Cchcr1Q8K2I2 Ctrc-202ENSMUST00000105781 784 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Cchcr1Q8K2I2 Gngt2-207ENSMUST00000107714 558 ntAPPRIS P1 TSL 3 BASIC12.97□□□□□ -0.33
Cchcr1Q8K2I2 1700071K01Rik-201ENSMUST00000117522 819 ntBASIC12.97□□□□□ -0.33
Cchcr1Q8K2I2 Gm15573-201ENSMUST00000119487 540 ntBASIC12.97□□□□□ -0.33
Cchcr1Q8K2I2 Gm14942-201ENSMUST00000119642 336 ntBASIC12.97□□□□□ -0.33
Cchcr1Q8K2I2 Sap25-201ENSMUST00000166099 1101 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Cchcr1Q8K2I2 AC154826.1-201ENSMUST00000217369 498 ntTSL 5 BASIC12.97□□□□□ -0.33
Cchcr1Q8K2I2 Atp5h-201ENSMUST00000043931 625 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Cchcr1Q8K2I2 Ttc7b-206ENSMUST00000223020 3307 ntTSL 5 BASIC12.97□□□□□ -0.33
Cchcr1Q8K2I2 Rpap1-201ENSMUST00000048493 4744 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Cchcr1Q8K2I2 4930555B11Rik-201ENSMUST00000123210 1533 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Cchcr1Q8K2I2 Olfr95-201ENSMUST00000060728 5129 ntAPPRIS P1 BASIC12.97□□□□□ -0.33
Cchcr1Q8K2I2 Sez6l-201ENSMUST00000075387 6055 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 54.1 ms