Protein–RNA interactions for Protein: Q8CIW5

Twnk, Twinkle protein, mitochondrial, mousemouse

Predictions only

Length 685 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TwnkQ8CIW5 Eef1d-207ENSMUST00000116440 896 ntAPPRIS ALT2 TSL 3 BASIC11.14□□□□□ -0.63
TwnkQ8CIW5 Gm12419-201ENSMUST00000116649 636 ntBASIC11.14□□□□□ -0.63
TwnkQ8CIW5 Gm8111-201ENSMUST00000117659 987 ntBASIC11.14□□□□□ -0.63
TwnkQ8CIW5 Prss46-201ENSMUST00000119427 1211 ntAPPRIS ALT2 TSL 1 (best) BASIC11.14□□□□□ -0.63
TwnkQ8CIW5 Pcnp-203ENSMUST00000119981 901 ntTSL 3 BASIC11.14□□□□□ -0.63
TwnkQ8CIW5 Spx-202ENSMUST00000126521 357 ntAPPRIS P2 TSL 5 BASIC11.14□□□□□ -0.63
TwnkQ8CIW5 Gm14199-201ENSMUST00000130021 495 ntTSL 2 BASIC11.14□□□□□ -0.63
TwnkQ8CIW5 Nudt6-207ENSMUST00000141438 899 ntTSL 2 BASIC11.14□□□□□ -0.63
TwnkQ8CIW5 Plgrkt-209ENSMUST00000152936 604 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
TwnkQ8CIW5 Prss36-208ENSMUST00000156152 1132 ntTSL 5 BASIC11.14□□□□□ -0.63
TwnkQ8CIW5 Gm15978-201ENSMUST00000161043 738 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
TwnkQ8CIW5 Prss46-202ENSMUST00000176403 1257 ntAPPRIS P2 TSL 1 (best) BASIC11.14□□□□□ -0.63
TwnkQ8CIW5 Gm6408-201ENSMUST00000179032 1171 ntAPPRIS P1 TSL 5 BASIC11.14□□□□□ -0.63
TwnkQ8CIW5 Gpx1-204ENSMUST00000193987 653 ntTSL 3 BASIC11.14□□□□□ -0.63
TwnkQ8CIW5 Gm45460-201ENSMUST00000211385 1038 ntTSL 5 BASIC11.14□□□□□ -0.63
TwnkQ8CIW5 CT485606.1-201ENSMUST00000213187 878 ntBASIC11.14□□□□□ -0.63
TwnkQ8CIW5 Pgpep1l-201ENSMUST00000032770 953 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
TwnkQ8CIW5 Gm5879-201ENSMUST00000089501 1209 ntBASIC11.14□□□□□ -0.63
TwnkQ8CIW5 Araf-201ENSMUST00000001155 2358 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
TwnkQ8CIW5 Nrxn1-215ENSMUST00000173917 1439 ntTSL 2 BASIC11.14□□□□□ -0.63
TwnkQ8CIW5 Gm37031-201ENSMUST00000195487 2530 ntBASIC11.14□□□□□ -0.63
TwnkQ8CIW5 Hist1h2be-201ENSMUST00000051091 2506 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
TwnkQ8CIW5 Clip1-202ENSMUST00000063905 4589 ntAPPRIS ALT2 TSL 5 BASIC11.14□□□□□ -0.63
TwnkQ8CIW5 Camk2b-207ENSMUST00000101586 1590 ntTSL 5 BASIC11.14□□□□□ -0.63
TwnkQ8CIW5 Acad9-201ENSMUST00000011492 3930 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
TwnkQ8CIW5 Nrip3-201ENSMUST00000033331 3910 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
TwnkQ8CIW5 Kcnmb3-201ENSMUST00000164954 1715 ntAPPRIS P1 TSL 5 BASIC11.14□□□□□ -0.63
TwnkQ8CIW5 Gm43482-201ENSMUST00000202797 1861 ntBASIC11.14□□□□□ -0.63
TwnkQ8CIW5 AC149588.2-201ENSMUST00000228182 1859 ntBASIC11.14□□□□□ -0.63
TwnkQ8CIW5 Zfp964-203ENSMUST00000204285 4333 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
TwnkQ8CIW5 Lvrn-201ENSMUST00000025358 3219 ntAPPRIS P1 TSL 5 BASIC11.14□□□□□ -0.63
TwnkQ8CIW5 Ippk-202ENSMUST00000220447 4421 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
TwnkQ8CIW5 Trim6-206ENSMUST00000214578 1506 ntTSL 5 BASIC11.14□□□□□ -0.63
TwnkQ8CIW5 Tubd1-203ENSMUST00000108030 1964 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
TwnkQ8CIW5 Cep112-213ENSMUST00000150863 3453 ntTSL 5 BASIC11.14□□□□□ -0.63
TwnkQ8CIW5 Atp1a3-205ENSMUST00000196684 3642 ntTSL 5 BASIC11.14□□□□□ -0.63
TwnkQ8CIW5 Ets2-201ENSMUST00000023612 3890 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
TwnkQ8CIW5 Rpl22-204ENSMUST00000139685 2051 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
TwnkQ8CIW5 Eef1a1-201ENSMUST00000042235 1794 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
TwnkQ8CIW5 Trim36-202ENSMUST00000167364 4543 ntTSL 5 BASIC11.13□□□□□ -0.63
TwnkQ8CIW5 Chrm1-202ENSMUST00000163785 6271 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
TwnkQ8CIW5 Pisd-203ENSMUST00000120591 2491 ntAPPRIS ALT2 TSL 5 BASIC11.13□□□□□ -0.63
TwnkQ8CIW5 1500012K07Rik-201ENSMUST00000181846 2345 ntTSL 5 BASIC11.13□□□□□ -0.63
TwnkQ8CIW5 Ebf2-203ENSMUST00000176161 5204 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
TwnkQ8CIW5 4933425D22Rik-201ENSMUST00000201035 1721 ntBASIC11.13□□□□□ -0.63
TwnkQ8CIW5 Ror2-202ENSMUST00000130235 3730 ntAPPRIS ALT2 TSL 1 (best) BASIC11.13□□□□□ -0.63
TwnkQ8CIW5 Etfbkmt-209ENSMUST00000179873 1576 ntAPPRIS P1 TSL 3 BASIC11.13□□□□□ -0.63
TwnkQ8CIW5 Dcst2-201ENSMUST00000208216 2285 ntAPPRIS P1 TSL 5 BASIC11.13□□□□□ -0.63
TwnkQ8CIW5 Ighv1-81-201ENSMUST00000103548 351 ntAPPRIS P1 BASIC11.13□□□□□ -0.63
TwnkQ8CIW5 Gm3415-201ENSMUST00000110595 924 ntAPPRIS ALT2 TSL 5 BASIC11.13□□□□□ -0.63
TwnkQ8CIW5 Gm3409-201ENSMUST00000110597 952 ntAPPRIS ALT2 TSL 5 BASIC11.13□□□□□ -0.63
TwnkQ8CIW5 Gm4879-201ENSMUST00000122190 1272 ntBASIC11.13□□□□□ -0.63
TwnkQ8CIW5 Gm15523-201ENSMUST00000160463 439 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
TwnkQ8CIW5 Hmgn3-201ENSMUST00000161796 862 ntAPPRIS ALT1 TSL 1 (best) BASIC11.13□□□□□ -0.63
TwnkQ8CIW5 Agtpbp1-219ENSMUST00000170378 653 ntTSL 3 BASIC11.13□□□□□ -0.63
TwnkQ8CIW5 Gm7741-201ENSMUST00000181445 989 ntBASIC11.13□□□□□ -0.63
TwnkQ8CIW5 Gm27241-202ENSMUST00000185013 570 ntTSL 2 BASIC11.13□□□□□ -0.63
TwnkQ8CIW5 Gm45338-201ENSMUST00000209198 820 ntTSL 5 BASIC11.13□□□□□ -0.63
TwnkQ8CIW5 6430531B16Rik-204ENSMUST00000209335 898 ntAPPRIS ALT2 TSL 1 (best) BASIC11.13□□□□□ -0.63
TwnkQ8CIW5 Gm2875-201ENSMUST00000211333 360 ntBASIC11.13□□□□□ -0.63
TwnkQ8CIW5 Gm40578-201ENSMUST00000220837 390 ntTSL 2 BASIC11.13□□□□□ -0.63
TwnkQ8CIW5 CT009546.1-201ENSMUST00000222573 1120 ntBASIC11.13□□□□□ -0.63
TwnkQ8CIW5 AC099645.1-201ENSMUST00000226476 1105 ntBASIC11.13□□□□□ -0.63
TwnkQ8CIW5 Nop10-201ENSMUST00000028553 1109 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
TwnkQ8CIW5 1700013F07Rik-201ENSMUST00000029485 661 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
TwnkQ8CIW5 Tbca-201ENSMUST00000046644 559 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
TwnkQ8CIW5 Gm9873-201ENSMUST00000063891 1097 ntBASIC11.13□□□□□ -0.63
TwnkQ8CIW5 Gm3402-202ENSMUST00000077133 924 ntAPPRIS ALT2 TSL 5 BASIC11.13□□□□□ -0.63
TwnkQ8CIW5 Sh2d5-201ENSMUST00000105823 3529 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
TwnkQ8CIW5 Gm26868-201ENSMUST00000181927 2655 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
TwnkQ8CIW5 Gm10848-201ENSMUST00000192361 1811 ntTSL 2 BASIC11.13□□□□□ -0.63
TwnkQ8CIW5 Slc12a8-203ENSMUST00000119173 2382 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
TwnkQ8CIW5 Slc37a4-201ENSMUST00000165839 2086 ntAPPRIS P2 TSL 1 (best) BASIC11.13□□□□□ -0.63
TwnkQ8CIW5 Prkcd-201ENSMUST00000022521 2612 ntAPPRIS ALT2 TSL 1 (best) BASIC11.13□□□□□ -0.63
TwnkQ8CIW5 Mrrf-201ENSMUST00000028250 2623 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
TwnkQ8CIW5 Tmem140-201ENSMUST00000074949 2614 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
TwnkQ8CIW5 Pstpip2-201ENSMUST00000114741 1395 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
TwnkQ8CIW5 Camk1g-201ENSMUST00000016323 2469 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
TwnkQ8CIW5 Rcbtb2-223ENSMUST00000170677 3573 ntAPPRIS ALT2 TSL 1 (best) BASIC11.13□□□□□ -0.63
TwnkQ8CIW5 Mybph-202ENSMUST00000191577 2320 ntAPPRIS P1 TSL 5 BASIC11.13□□□□□ -0.63
TwnkQ8CIW5 Pigc-201ENSMUST00000028021 2196 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
TwnkQ8CIW5 Txndc16-203ENSMUST00000123879 4069 ntAPPRIS ALT2 TSL 1 (best) BASIC11.13□□□□□ -0.63
TwnkQ8CIW5 Sp6-201ENSMUST00000047997 3546 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
TwnkQ8CIW5 Xirp1-201ENSMUST00000111635 5839 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
TwnkQ8CIW5 Smtn-210ENSMUST00000170588 3386 ntAPPRIS P2 TSL 1 (best) BASIC11.13□□□□□ -0.63
TwnkQ8CIW5 Myo9a-203ENSMUST00000128341 11985 ntAPPRIS ALT2 TSL 5 BASIC11.13□□□□□ -0.63
TwnkQ8CIW5 Recql-202ENSMUST00000100832 3054 ntAPPRIS ALT2 TSL 1 (best) BASIC11.12□□□□□ -0.63
TwnkQ8CIW5 Dcun1d2-206ENSMUST00000203604 2112 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
TwnkQ8CIW5 Gm9244-201ENSMUST00000056767 2129 ntBASIC11.12□□□□□ -0.63
TwnkQ8CIW5 Myo3b-202ENSMUST00000112241 1319 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
TwnkQ8CIW5 Cd276-201ENSMUST00000039788 3186 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
TwnkQ8CIW5 Col9a1-201ENSMUST00000054588 3834 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
TwnkQ8CIW5 Smarca2-201ENSMUST00000025862 5921 ntAPPRIS P2 TSL 5 BASIC11.12□□□□□ -0.63
TwnkQ8CIW5 Fbxo40-201ENSMUST00000075869 5137 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
TwnkQ8CIW5 Pde1b-205ENSMUST00000227955 3258 ntAPPRIS ALT1 BASIC11.12□□□□□ -0.63
TwnkQ8CIW5 Arsb-201ENSMUST00000091403 4038 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
TwnkQ8CIW5 Bora-201ENSMUST00000022656 2726 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
TwnkQ8CIW5 Slc4a9-201ENSMUST00000074298 2714 ntAPPRIS P3 TSL 5 BASIC11.12□□□□□ -0.63
TwnkQ8CIW5 Gm13556-201ENSMUST00000132692 1412 ntTSL 3 BASIC11.12□□□□□ -0.63
TwnkQ8CIW5 Arih1-202ENSMUST00000165322 1431 ntTSL 5 BASIC11.12□□□□□ -0.63
Retrieved 100 of 76,532 protein–RNA pairs in 36.6 ms