Protein–RNA interactions for Protein: Q8CEI3

Ccdc28a, Coiled-coil domain-containing 28A, mousemouse

Predictions only

Length 192 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc28aQ8CEI3 Zfp114-203ENSMUST00000206547 3154 ntAPPRIS P2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Ccdc28aQ8CEI3 Gm37368-201ENSMUST00000193173 3212 ntBASIC11.56□□□□□ -0.56
Ccdc28aQ8CEI3 Hk3-201ENSMUST00000052949 3219 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Ccdc28aQ8CEI3 Rtn3-204ENSMUST00000088171 4973 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Ccdc28aQ8CEI3 Gfi1b-204ENSMUST00000164290 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Ccdc28aQ8CEI3 1700036A12Rik-202ENSMUST00000190053 1828 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Ccdc28aQ8CEI3 Rims1-203ENSMUST00000097809 6179 ntAPPRIS ALT2 TSL 5 BASIC11.55□□□□□ -0.56
Ccdc28aQ8CEI3 4933411K16Rik-201ENSMUST00000164518 1380 ntAPPRIS P1 BASIC11.55□□□□□ -0.56
Ccdc28aQ8CEI3 Ntrk3-205ENSMUST00000193002 2678 ntAPPRIS ALT2 TSL 5 BASIC11.55□□□□□ -0.56
Ccdc28aQ8CEI3 Cacna1c-226ENSMUST00000219833 7591 ntTSL 5 BASIC11.55□□□□□ -0.56
Ccdc28aQ8CEI3 Rxfp2-201ENSMUST00000065745 2539 ntAPPRIS P3 TSL 1 (best) BASIC11.55□□□□□ -0.56
Ccdc28aQ8CEI3 Dclk3-201ENSMUST00000111879 3005 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Ccdc28aQ8CEI3 Phtf1os-201ENSMUST00000160110 4046 ntBASIC11.55□□□□□ -0.56
Ccdc28aQ8CEI3 Stat5a-202ENSMUST00000107356 3738 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Ccdc28aQ8CEI3 Gm18198-201ENSMUST00000204986 1551 ntBASIC11.55□□□□□ -0.56
Ccdc28aQ8CEI3 Zfp110-201ENSMUST00000004614 3591 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Ccdc28aQ8CEI3 Pck2-201ENSMUST00000048781 3400 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Ccdc28aQ8CEI3 Atp6v1c2-208ENSMUST00000221129 1425 ntAPPRIS P1 TSL 5 BASIC11.55□□□□□ -0.56
Ccdc28aQ8CEI3 Prrx1-201ENSMUST00000027878 4952 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Ccdc28aQ8CEI3 Ighg2c-201ENSMUST00000103416 1214 ntAPPRIS P5 BASIC11.55□□□□□ -0.56
Ccdc28aQ8CEI3 Hist1h3d-201ENSMUST00000105105 1249 ntAPPRIS P1 BASIC11.55□□□□□ -0.56
Ccdc28aQ8CEI3 Rps3-202ENSMUST00000107096 952 ntTSL 3 BASIC11.55□□□□□ -0.56
Ccdc28aQ8CEI3 Gm22711-201ENSMUST00000116890 133 ntBASIC11.55□□□□□ -0.56
Ccdc28aQ8CEI3 Gm14398-201ENSMUST00000117287 1073 ntBASIC11.55□□□□□ -0.56
Ccdc28aQ8CEI3 Gm13035-201ENSMUST00000117496 342 ntBASIC11.55□□□□□ -0.56
Ccdc28aQ8CEI3 Gm7851-201ENSMUST00000117574 323 ntBASIC11.55□□□□□ -0.56
Ccdc28aQ8CEI3 Gm16066-201ENSMUST00000118575 1086 ntTSL 3 BASIC11.55□□□□□ -0.56
Ccdc28aQ8CEI3 Gm3948-201ENSMUST00000147795 421 ntTSL 3 BASIC11.55□□□□□ -0.56
Ccdc28aQ8CEI3 Cideb-201ENSMUST00000001497 1212 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Ccdc28aQ8CEI3 Prr3-206ENSMUST00000173585 770 ntAPPRIS ALT2 TSL 2 BASIC11.55□□□□□ -0.56
Ccdc28aQ8CEI3 Gm4131-201ENSMUST00000186010 1264 ntAPPRIS P1 TSL 5 BASIC11.55□□□□□ -0.56
Ccdc28aQ8CEI3 Gm37707-201ENSMUST00000195309 325 ntTSL 3 BASIC11.55□□□□□ -0.56
Ccdc28aQ8CEI3 D530033B14Rik-202ENSMUST00000206282 216 ntBASIC11.55□□□□□ -0.56
Ccdc28aQ8CEI3 Btg4-203ENSMUST00000213680 1282 ntAPPRIS P2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Ccdc28aQ8CEI3 Gm33979-201ENSMUST00000219486 691 ntTSL 5 BASIC11.55□□□□□ -0.56
Ccdc28aQ8CEI3 Abhd11os-203ENSMUST00000222613 363 ntBASIC11.55□□□□□ -0.56
Ccdc28aQ8CEI3 Rassf8-202ENSMUST00000058538 1131 ntBASIC11.55□□□□□ -0.56
Ccdc28aQ8CEI3 Vmn1r220-201ENSMUST00000072385 897 ntAPPRIS P1 BASIC11.55□□□□□ -0.56
Ccdc28aQ8CEI3 1700007G11Rik-201ENSMUST00000080333 861 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Ccdc28aQ8CEI3 Gm10020-201ENSMUST00000081993 612 ntBASIC11.55□□□□□ -0.56
Ccdc28aQ8CEI3 Olfr584-201ENSMUST00000098210 964 ntBASIC11.55□□□□□ -0.56
Ccdc28aQ8CEI3 1600014C10Rik-202ENSMUST00000165308 3335 ntAPPRIS P1 TSL 5 BASIC11.55□□□□□ -0.56
Ccdc28aQ8CEI3 1600014C10Rik-204ENSMUST00000178207 3341 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Ccdc28aQ8CEI3 C230024C17Rik-201ENSMUST00000190663 3337 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Ccdc28aQ8CEI3 Sema3b-203ENSMUST00000102530 3410 ntAPPRIS P1 TSL 5 BASIC11.55□□□□□ -0.56
Ccdc28aQ8CEI3 Plcxd2-201ENSMUST00000130481 7140 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Ccdc28aQ8CEI3 Dmrtc1b-203ENSMUST00000118842 1321 ntAPPRIS ALT2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Ccdc28aQ8CEI3 Col4a3-201ENSMUST00000113457 8554 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Ccdc28aQ8CEI3 Syt15-201ENSMUST00000035351 3623 ntAPPRIS P3 TSL 1 (best) BASIC11.55□□□□□ -0.56
Ccdc28aQ8CEI3 Ern2-201ENSMUST00000033153 2914 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Ccdc28aQ8CEI3 Plekha7-207ENSMUST00000182511 4502 ntTSL 2 BASIC11.55□□□□□ -0.56
Ccdc28aQ8CEI3 Pde2a-201ENSMUST00000163751 4218 ntAPPRIS ALT2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Ccdc28aQ8CEI3 Cutal-203ENSMUST00000113068 2278 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Ccdc28aQ8CEI3 Nln-205ENSMUST00000224945 2486 ntBASIC11.54□□□□□ -0.56
Ccdc28aQ8CEI3 Krt33b-201ENSMUST00000073890 1581 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Ccdc28aQ8CEI3 Atp13a4-201ENSMUST00000039090 2878 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Ccdc28aQ8CEI3 Abcf3-201ENSMUST00000003319 3090 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Ccdc28aQ8CEI3 Ttll9-201ENSMUST00000099197 1797 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Ccdc28aQ8CEI3 Cct3-201ENSMUST00000001452 1977 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Ccdc28aQ8CEI3 Gm5766-201ENSMUST00000160520 1977 ntBASIC11.54□□□□□ -0.56
Ccdc28aQ8CEI3 Dip2c-202ENSMUST00000169960 4801 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Ccdc28aQ8CEI3 Svil-211ENSMUST00000143254 6594 ntAPPRIS ALT2 TSL 5 BASIC11.54□□□□□ -0.56
Ccdc28aQ8CEI3 Mdm4-206ENSMUST00000186617 4694 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Ccdc28aQ8CEI3 Ifih1-201ENSMUST00000028259 5470 ntAPPRIS P3 TSL 1 (best) BASIC11.54□□□□□ -0.56
Ccdc28aQ8CEI3 Gm5795-201ENSMUST00000100920 984 ntAPPRIS P2 TSL 5 BASIC11.54□□□□□ -0.56
Ccdc28aQ8CEI3 Gm22920-201ENSMUST00000102175 109 ntBASIC11.54□□□□□ -0.56
Ccdc28aQ8CEI3 Gm15528-201ENSMUST00000117821 864 ntBASIC11.54□□□□□ -0.56
Ccdc28aQ8CEI3 Dctn6-203ENSMUST00000118811 934 ntTSL 3 BASIC11.54□□□□□ -0.56
Ccdc28aQ8CEI3 Spx-202ENSMUST00000126521 357 ntAPPRIS P2 TSL 5 BASIC11.54□□□□□ -0.56
Ccdc28aQ8CEI3 Gm15829-201ENSMUST00000145415 869 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Ccdc28aQ8CEI3 Gm25492-201ENSMUST00000157383 129 ntBASIC11.54□□□□□ -0.56
Ccdc28aQ8CEI3 Gm3685-201ENSMUST00000169215 984 ntAPPRIS P5 TSL 5 BASIC11.54□□□□□ -0.56
Ccdc28aQ8CEI3 Mir7051-201ENSMUST00000184167 73 ntBASIC11.54□□□□□ -0.56
Ccdc28aQ8CEI3 Gm27241-202ENSMUST00000185013 570 ntTSL 2 BASIC11.54□□□□□ -0.56
Ccdc28aQ8CEI3 Nt5dc1-206ENSMUST00000213269 802 ntTSL 5 BASIC11.54□□□□□ -0.56
Ccdc28aQ8CEI3 AC122024.3-201ENSMUST00000217719 294 ntBASIC11.54□□□□□ -0.56
Ccdc28aQ8CEI3 Csrp2-203ENSMUST00000219502 544 ntTSL 3 BASIC11.54□□□□□ -0.56
Ccdc28aQ8CEI3 CT030170.2-201ENSMUST00000223267 126 ntBASIC11.54□□□□□ -0.56
Ccdc28aQ8CEI3 Tnfrsf19-203ENSMUST00000224371 1239 ntAPPRIS ALT2 BASIC11.54□□□□□ -0.56
Ccdc28aQ8CEI3 AC137950.2-201ENSMUST00000227127 1089 ntBASIC11.54□□□□□ -0.56
Ccdc28aQ8CEI3 Wfdc21-201ENSMUST00000070832 434 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Ccdc28aQ8CEI3 Hcst-201ENSMUST00000075062 442 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Ccdc28aQ8CEI3 Gm10338-201ENSMUST00000096148 984 ntAPPRIS P1 TSL 2 BASIC11.54□□□□□ -0.56
Ccdc28aQ8CEI3 Gm43274-201ENSMUST00000202545 5000 ntBASIC11.54□□□□□ -0.56
Ccdc28aQ8CEI3 Armcx2-202ENSMUST00000113193 3666 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Ccdc28aQ8CEI3 Tyw1-202ENSMUST00000044204 4698 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Ccdc28aQ8CEI3 Edaradd-201ENSMUST00000179308 6668 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Ccdc28aQ8CEI3 Eif4e1b-201ENSMUST00000110003 2131 ntAPPRIS P3 TSL 2 BASIC11.54□□□□□ -0.56
Ccdc28aQ8CEI3 Fos-201ENSMUST00000021674 2108 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Ccdc28aQ8CEI3 AC122367.1-201ENSMUST00000221978 1709 ntBASIC11.54□□□□□ -0.56
Ccdc28aQ8CEI3 Srsf5-201ENSMUST00000094693 1527 ntAPPRIS P3 TSL 1 (best) BASIC11.54□□□□□ -0.56
Ccdc28aQ8CEI3 Eid3-201ENSMUST00000211623 1305 ntAPPRIS P1 BASIC11.54□□□□□ -0.56
Ccdc28aQ8CEI3 Ccdc136-207ENSMUST00000154619 3356 ntAPPRIS ALT2 TSL 5 BASIC11.54□□□□□ -0.56
Ccdc28aQ8CEI3 Wwp2-204ENSMUST00000212205 2758 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Ccdc28aQ8CEI3 Bcl9-201ENSMUST00000046521 6102 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Ccdc28aQ8CEI3 Sh3gl2-204ENSMUST00000107189 3231 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Ccdc28aQ8CEI3 Cyp2a22-201ENSMUST00000170227 1796 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Ccdc28aQ8CEI3 Nod1-202ENSMUST00000168172 4064 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Ccdc28aQ8CEI3 Tnip1-206ENSMUST00000108889 2834 ntAPPRIS P3 TSL 1 (best) BASIC11.54□□□□□ -0.56
Ccdc28aQ8CEI3 Mylk3-202ENSMUST00000121972 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Retrieved 100 of 76,532 protein–RNA pairs in 46 ms